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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH08750 Soybean cytosol 40.45 70.17
GSMUA_AchrUn_... Banana nucleus 68.78 65.92
KRG91629 Soybean cytosol 64.89 65.3
VIT_18s0166g00210.t01 Wine grape cytosol 65.88 64.48
GSMUA_Achr2P20470_001 Banana endoplasmic reticulum, plasma membrane 57.19 64.03
KRH35179 Soybean cytosol 64.89 64.02
CDY70949 Canola cytosol 20.27 63.28
KRH30228 Soybean cytosol 23.08 62.65
Solyc04g071040.2.1 Tomato cytosol 63.44 62.26
PGSC0003DMT400002081 Potato cytosol 63.35 62.17
KRH70333 Soybean cytosol 62.99 62.14
AT5G42140.2 Thale cress cytosol, endoplasmic reticulum, nucleus 60.54 62.06
GSMUA_Achr6P13030_001 Banana endoplasmic reticulum 53.94 60.88
CDY47138 Canola cytosol 57.65 60.84
Bra016214.1-P Field mustard cytosol 57.56 60.57
CDY11586 Canola cytosol 57.47 60.3
AT1G76950.1 Thale cress cytosol 60.09 60.2
Os04t0686200-01 Rice plasma membrane 57.56 60.17
CDX88324 Canola cytosol 57.38 59.75
Bra015708.1-P Field mustard cytosol 57.65 59.31
CDX87557 Canola cytosol 57.47 59.18
Bra003698.1-P Field mustard mitochondrion 57.56 59.05
EES13137 Sorghum cytosol 55.84 57.99
KRH08736 Soybean endoplasmic reticulum 36.56 57.96
TraesCS2B01G609200.1 Wheat cytosol 56.02 57.85
TraesCS2A01G581400.1 Wheat cytosol 55.93 57.76
CDY48550 Canola cytosol 51.22 57.76
TraesCS2D01G589800.1 Wheat cytosol 55.84 57.66
HORVU3Hr1G108180.1 Barley mitochondrion 8.6 56.89
HORVU2Hr1G124270.22 Barley cytosol, mitochondrion, nucleus 55.2 56.69
Zm00001d002876_P001 Maize mitochondrion 54.93 55.84
CDX68076 Canola cytosol 41.81 55.66
KRH30227 Soybean cytosol 21.63 52.99
GSMUA_Achr8P00080_001 Banana endoplasmic reticulum 43.62 51.55
GSMUA_Achr5P08220_001 Banana cytosol 49.05 49.27
GSMUA_Achr4P00510_001 Banana cytosol 40.09 46.1
GSMUA_Achr1P02140_001 Banana cytosol 32.58 40.31
GSMUA_Achr5P11650_001 Banana cytosol 33.39 38.04
GSMUA_Achr6P17690_001 Banana cytosol 14.03 35.31
GSMUA_Achr3P19000_001 Banana nucleus 13.3 32.74
GSMUA_Achr8P06920_001 Banana cytosol 9.23 31.19
GSMUA_Achr7P20980_001 Banana cytosol 40.54 30.83
GSMUA_Achr5P12060_001 Banana mitochondrion 11.86 28.98
GSMUA_Achr2P10610_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 12.85 28.86
GSMUA_Achr1P00100_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 12.67 28.46
GSMUA_Achr10P... Banana mitochondrion 10.68 28.1
GSMUA_Achr6P29750_001 Banana cytosol 9.86 27.46
GSMUA_Achr10P... Banana cytosol 11.95 27.33
GSMUA_Achr9P15560_001 Banana cytosol 8.96 26.61
GSMUA_Achr9P02110_001 Banana plastid 12.13 24.91
GSMUA_AchrUn_... Banana cytosol 11.76 24.39
GSMUA_AchrUn_... Banana cytosol, plastid 11.76 24.21
Protein Annotations
Gene3D:2.130.10.30Gene3D:2.30.29.30Gene3D:3.30.40.10MapMan:35.1InterPro:BRX_NInterPro:Brevis_radix_dom
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr8G07850_001EnsemblPlants:GSMUA_Achr8P07850_001
EnsemblPlants:GSMUA_Achr8T07850_001InterPro:IPR000408InterPro:IPR001849InterPro:IPR009091InterPro:IPR011993InterPro:IPR013083
InterPro:IPR013591InterPro:IPR017455UniProt:M0TNI8PFAM:PF00415PFAM:PF01363PFAM:PF08381
PFAM:PF13713PFAM:PF16457InterPro:PH-like_dom_sfInterPro:PH_domainPRINTS:PR00633ScanProsite:PS00626
PFscan:PS50012PFscan:PS50178PFscan:PS51514PANTHER:PTHR22870PANTHER:PTHR22870:SF91InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condensSMART:SM00064SUPFAM:SSF50729SUPFAM:SSF50985SUPFAM:SSF57903UniParc:UPI0002956DAF
InterPro:Znf_FYVEInterPro:Znf_FYVE-relInterPro:Znf_FYVE_PHDInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
Putative Probable E3 ubiquitin-protein ligase HERC1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G07850_001]
Coordinates
chr8:-:5244296..5260011
Molecular Weight (calculated)
120289.0 Da
IEP (calculated)
8.640
GRAVY (calculated)
-0.453
Length
1105 amino acids
Sequence
(BLAST)
0001: MADLLGSANA DRDIDKALIA LKKGAQLLKY GRKGKPKFCP FRLSNDESTL IWFSGGGERT LKLASVLRIV PGQRTPVFQR YLRPDRDYLS FSLIYNDGKR
0101: SLDLICKDKV EAEVWFSGLK ALISTGQYGR SKIDGWNNGG LNTDDSRGSA SNSISDQSIG STLDSSESRL TSSSIPKNLS FEYSVTSDIS DATNMHVKGV
0201: SSDGFRVSIS SVPSTSSHGS AQDDFDAAGD VYVWGEVICD TSTRISADKN SSPSSARSDI LLPKPIESNV VLDVHHVACG VRHAALVTRQ GELFTWGEES
0301: GGRLGHGVGM DIIHPRLLES LSTFNVDYVA CGEFHTCAVT ATGELYTWGD GAHNAGLLGH GTNVSHWMPK RVSGPLEGLQ VSYVSCGVWH TAIVTTAGQL
0401: FTFGDGTFGV LGHGNRETVL YPREVESLAG LKTIAVSCGV WHTAAVVEVM VTQSSASSGK LFTWGDGDKY RLGHGDKVAR LKPTCVPSLI DYNFHRLACG
0501: HSLTIGLTTS GQVFTMGSNV YGQLGNPRSD GKLPCMVEDK LAGEPVGEVA CGSYHIAVLT TRGEVYTWGK GANGRLGHGD FEDRKTPTLV EALKDRPVKQ
0601: ISCGSNFTAA ICQHKWISGA EQSQCSACRQ AFGFTRKKHN CYNCGLVHCH QCSSRKALRA ALSPNPGKPY RVCDSCYVKL NSGLEPGGVN NKKNAKPWIS
0701: TESKDKFDKV DTLPKASLSR NLELIKSLDI KTAKNGKNTN FMYMTQNPKG SSVSPLKSLA FPGGIDMLQA VSKPVQTTGA NSANRSRAVS PFSRKSSPPR
0801: STTPTPTTSG LSFTKNISDS LKKTNDLLNQ ELLKLRSEVD SLRQRCERQD FELQKAEKKA KEAMTVAAEE STKSKAAKEV IKSLTAQLKE MAERLPHGTY
0901: GTNTTIPMHL PNGVESHAIQ HIGSSGEHLF INDAGNIANM APSRTGYLGQ INENSGDNTS VREIYRPNET SAPPTPKIVN AKMEQNLNPQ NAGQGEMWAS
1001: STRLKDIDSR TIASPQSHDD AVSAVRSPSE LSNDVEAEWI EQFEPGVYIT LVTLRDGTRD LKRVRFSRRR FGEQQAEAWW SENRERVYEK YNFRVPDRTS
1101: SAMLT
Best Arabidopsis Sequence Match ( AT5G42140.1 )
(BLAST)
0001: MADLVSYGNV VRDIEQALIA LKKGAQLLKY GRKGKPKFCP FRLSNDETSL IWISNGGEKR LKLATVSKIV PGQRTAVFQR YLRPDKDYLS FSLIYSNRKR
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain [Source:TAIR;Acc:AT5G42140]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.