Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016214.1-P | Field mustard | cytosol | 98.57 | 98.29 |
| CDY11586 | Canola | cytosol | 97.71 | 97.15 |
| AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 86.34 | 83.86 |
| KRH08750 | Soybean | cytosol | 44.22 | 72.68 |
| KRG91629 | Soybean | cytosol | 70.58 | 67.3 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 72.3 | 67.05 |
| KRH35179 | Soybean | cytosol | 71.54 | 66.88 |
| CDY70949 | Canola | cytosol | 22.45 | 66.38 |
| KRH30228 | Soybean | cytosol | 25.5 | 65.6 |
| KRH70333 | Soybean | cytosol | 70.11 | 65.54 |
| Solyc04g071040.2.1 | Tomato | cytosol | 70.2 | 65.28 |
| PGSC0003DMT400002081 | Potato | cytosol | 70.11 | 65.19 |
| CDX87557 | Canola | cytosol | 64.47 | 62.91 |
| CDX88324 | Canola | cytosol | 63.71 | 62.87 |
| CDY48550 | Canola | cytosol | 58.74 | 62.76 |
| CDX68076 | Canola | cytosol | 49.67 | 62.65 |
| Os01t0964800-01 | Rice | mitochondrion | 34.19 | 61.83 |
| KRH08736 | Soybean | endoplasmic reticulum | 40.69 | 61.12 |
| GSMUA_Achr2P20470_001 | Banana | endoplasmic reticulum, plasma membrane | 55.78 | 59.17 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 51.1 | 58.99 |
| TraesCS1A01G020400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 50.81 | 58.65 |
| KRH30227 | Soybean | cytosol | 25.21 | 58.54 |
| TraesCS1D01G019900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 50.72 | 58.42 |
| TraesCS1B01G024400.1 | Wheat | cytosol, mitochondrion, nucleus | 50.53 | 58.32 |
| Zm00001d011805_P001 | Maize | cytosol | 50.53 | 58.0 |
| KXG34192 | Sorghum | cytosol | 50.33 | 57.79 |
| GSMUA_Achr8P07850_001 | Banana | cytosol | 60.84 | 57.65 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 49.86 | 57.49 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 47.66 | 57.42 |
| TraesCS3A01G512900.1 | Wheat | cytosol | 49.76 | 57.19 |
| CDY66504 | Canola | cytosol | 44.79 | 56.85 |
| Zm00001d035723_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 49.67 | 56.71 |
| TraesCS3B01G581600.2 | Wheat | cytosol | 49.28 | 56.58 |
| EES18851 | Sorghum | cytosol, plastid | 49.47 | 56.55 |
| GSMUA_Achr6P13030_001 | Banana | endoplasmic reticulum | 52.82 | 56.49 |
| Os05t0106700-00 | Rice | mitochondrion | 50.43 | 56.17 |
| Zm00001d006773_P001 | Maize | cytosol | 21.49 | 55.83 |
| Os04t0686200-01 | Rice | plasma membrane | 55.4 | 54.87 |
| EES13137 | Sorghum | cytosol | 55.68 | 54.79 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 8.69 | 54.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.64 | 53.25 |
| TraesCS2A01G581400.1 | Wheat | cytosol | 54.25 | 53.08 |
| TraesCS2D01G589800.1 | Wheat | cytosol | 54.15 | 52.99 |
| Zm00001d002876_P001 | Maize | mitochondrion | 55.01 | 52.99 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 54.06 | 52.9 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 54.06 | 52.6 |
| CDX69686 | Canola | nucleus | 51.58 | 50.47 |
| CDX85690 | Canola | nucleus | 51.1 | 50.0 |
| CDX91165 | Canola | nucleus | 51.1 | 49.86 |
| CDY12764 | Canola | cytosol | 49.67 | 49.62 |
| CDX85076 | Canola | cytosol | 49.19 | 49.61 |
| CDX97187 | Canola | nucleus | 50.05 | 49.53 |
| CDX92532 | Canola | nucleus | 51.1 | 48.03 |
| CDX87986 | Canola | cytosol | 9.36 | 47.57 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 51.38 | 47.4 |
| CDY13998 | Canola | nucleus | 50.14 | 47.04 |
| CDX70876 | Canola | cytosol | 49.95 | 46.91 |
| CDX77534 | Canola | cytosol | 49.19 | 46.35 |
| CDY49416 | Canola | cytosol | 49.38 | 46.2 |
| CDY28580 | Canola | plasma membrane | 41.64 | 41.76 |
| CDY44086 | Canola | plasma membrane, vacuole | 41.93 | 41.73 |
| CDX77871 | Canola | cytosol | 36.39 | 40.15 |
| CDY21795 | Canola | cytosol | 36.49 | 39.92 |
| CDY31624 | Canola | cytosol | 35.15 | 37.44 |
| CDX87989 | Canola | cytosol | 34.96 | 36.53 |
| CDY31347 | Canola | cytosol | 15.09 | 36.24 |
| CDY43762 | Canola | cytosol | 14.71 | 35.98 |
| CDX81201 | Canola | cytosol | 14.9 | 35.45 |
| CDY60046 | Canola | cytosol | 15.09 | 35.27 |
| CDX84451 | Canola | cytosol | 14.9 | 34.98 |
| CDY39843 | Canola | cytosol | 13.47 | 34.9 |
| CDY46423 | Canola | cytosol | 10.41 | 28.76 |
| CDY69131 | Canola | cytosol | 8.79 | 28.66 |
| CDY16215 | Canola | cytosol | 10.41 | 28.24 |
| CDY44785 | Canola | mitochondrion | 11.65 | 28.18 |
| CDY34733 | Canola | cytosol | 8.88 | 27.76 |
| CDY57523 | Canola | cytosol | 12.42 | 27.6 |
| CDY40735 | Canola | mitochondrion | 11.46 | 27.46 |
| CDY43240 | Canola | cytosol | 12.32 | 27.33 |
| CDX69479 | Canola | cytosol | 10.22 | 26.95 |
| CDY26488 | Canola | cytosol | 10.12 | 26.63 |
| CDX97668 | Canola | cytosol | 12.13 | 26.62 |
| CDY56827 | Canola | cytosol | 12.13 | 26.62 |
| CDX96062 | Canola | plastid | 12.8 | 25.87 |
| CDY04192 | Canola | cytosol | 12.13 | 25.81 |
| CDY39172 | Canola | cytosol | 12.13 | 25.81 |
| CDY56518 | Canola | cytosol, plastid | 12.7 | 25.58 |
| CDY01845 | Canola | plastid | 12.61 | 25.53 |
| CDY02190 | Canola | mitochondrion | 10.7 | 25.28 |
| CDY51633 | Canola | mitochondrion | 10.7 | 25.23 |
| CDY28863 | Canola | cytosol | 12.51 | 25.19 |
| CDX99731 | Canola | cytosol, plastid | 12.51 | 24.49 |
| CDX83586 | Canola | cytosol, plastid | 12.32 | 24.39 |
| CDY13609 | Canola | cytosol | 12.32 | 24.39 |
| CDY40988 | Canola | cytosol, plastid | 11.94 | 22.77 |
| CDY14709 | Canola | nucleus | 10.89 | 16.5 |
| CDY20113 | Canola | endoplasmic reticulum, extracellular | 11.94 | 15.15 |
| CDY21840 | Canola | endoplasmic reticulum, extracellular | 11.94 | 15.13 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078ID62 | UniProt:A0A078ID62 |
| InterPro:BRX_N | InterPro:Brevis_radix_dom | EnsemblPlants:CDY47138 | ProteinID:CDY47138 | ProteinID:CDY47138.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00086796001 | InterPro:IPR000408 | InterPro:IPR001849 |
| InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 |
| PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16457 | InterPro:PH-like_dom_sf | InterPro:PH_domain |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 |
| PANTHER:PTHR22870:SF91 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 |
| SUPFAM:SSF57903 | UniParc:UPI0004EE0E93 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g05450DBnaA08g05450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID62]
Coordinates
chrLK032699:+:12949..17435
Molecular Weight (calculated)
113178.0 Da
IEP (calculated)
9.206
GRAVY (calculated)
-0.438
Length
1047 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADLVSYGSI ERDIEQALIA LKKGAQLLKY GRKGKPKFCP FRLSNDETSL IWISNGGEKR LKLSTVSKIV PGQRTAVFQR YLRPDKDYLS FSLIYSNRKR
0101: TLDVICKDKV EAEVWIAGLK ALISGQGGRA KIDGWSDGLS IADSRVGSPT NSSICASRDF NSVDVPYTST AFSKSIRTEN SVSSERSHVP SGSPNMSVRG
0201: PSTDVFRVSV SSAQSTTSSH GSGPDDRDAL GDVYLWGEVP SDKNASSKSN VLVPKPLESN VVLDVHQVAC GVKHAALVSR QGEVFTWGEE SGGRLGHGMG
0301: KDVTGGPPQL IESLAGSSVD FVACGEFHTC AVTMNGEIYT WGDGTHNAGL LGHGTDVSHW IPKRISGPLE GLRIASVSCG PWHTALITST GQLFTFGDGT
0401: FGVLGHGDRE AVFYPREVKS LSGLKTIAVA CGVWHAAAVV EVSSSVSSGK LFTWGDGDKG RLGHGDNETR LKPTCVSSLI DNDFYKVACG HSLTVGLTTS
0501: GKVYTMGSSV YGQLGNPTAD GKLPCLASND SVEEVACGAY HVAVLTSRNE VFTWGKGANG RLGHGDVEDR NAPTLVEALK ERHVKYIACG ANFTAAICLH
0601: KWASGAEQTQ CSACKQAFGF TKKSHNCYNC GLVHCHSCSS KKSLKASLAP NPGKPYRVCD SCYSKLSKAS EGSVMPRLSG ENKDRLDKAE LRLAKSGIPS
0701: KIDLIKQLDS RAARQGRKGE TFSLVRTSQT PLLQLRDAFS NVAELRRGPP KPVVTPSGGS SRSVSPFSRR SSPTRSVTPI PSMVGIGFST SVTESLKKTN
0801: ELLNQEVVRL RAQAESLRQR CEVQELEVQK SAKKAQEAMK LASEETAKSE AAKEVIKSLT TQLKDIVKLL PPGAHEAETA RTTNLLNGFE QNGIHFANAK
0901: GQRSSRSDSM SDTPLASPLT PPSRSMNGLW RSSQSPRNTD ELQSDGVRIS NGFSEDGDTR RNSRSSVATS NASQVEAEWI EQYEPGVYIT LLALGDGTRD
1001: LKRVRFSRRR FKEQQAEAWW TENRERVYEK YNIRGTDRPS VQSQLPT
0101: TLDVICKDKV EAEVWIAGLK ALISGQGGRA KIDGWSDGLS IADSRVGSPT NSSICASRDF NSVDVPYTST AFSKSIRTEN SVSSERSHVP SGSPNMSVRG
0201: PSTDVFRVSV SSAQSTTSSH GSGPDDRDAL GDVYLWGEVP SDKNASSKSN VLVPKPLESN VVLDVHQVAC GVKHAALVSR QGEVFTWGEE SGGRLGHGMG
0301: KDVTGGPPQL IESLAGSSVD FVACGEFHTC AVTMNGEIYT WGDGTHNAGL LGHGTDVSHW IPKRISGPLE GLRIASVSCG PWHTALITST GQLFTFGDGT
0401: FGVLGHGDRE AVFYPREVKS LSGLKTIAVA CGVWHAAAVV EVSSSVSSGK LFTWGDGDKG RLGHGDNETR LKPTCVSSLI DNDFYKVACG HSLTVGLTTS
0501: GKVYTMGSSV YGQLGNPTAD GKLPCLASND SVEEVACGAY HVAVLTSRNE VFTWGKGANG RLGHGDVEDR NAPTLVEALK ERHVKYIACG ANFTAAICLH
0601: KWASGAEQTQ CSACKQAFGF TKKSHNCYNC GLVHCHSCSS KKSLKASLAP NPGKPYRVCD SCYSKLSKAS EGSVMPRLSG ENKDRLDKAE LRLAKSGIPS
0701: KIDLIKQLDS RAARQGRKGE TFSLVRTSQT PLLQLRDAFS NVAELRRGPP KPVVTPSGGS SRSVSPFSRR SSPTRSVTPI PSMVGIGFST SVTESLKKTN
0801: ELLNQEVVRL RAQAESLRQR CEVQELEVQK SAKKAQEAMK LASEETAKSE AAKEVIKSLT TQLKDIVKLL PPGAHEAETA RTTNLLNGFE QNGIHFANAK
0901: GQRSSRSDSM SDTPLASPLT PPSRSMNGLW RSSQSPRNTD ELQSDGVRIS NGFSEDGDTR RNSRSSVATS NASQVEAEWI EQYEPGVYIT LLALGDGTRD
1001: LKRVRFSRRR FKEQQAEAWW TENRERVYEK YNIRGTDRPS VQSQLPT
0001: MADLVSYGNV VRDIEQALIA LKKGAQLLKY GRKGKPKFCP FRLSNDETSL IWISNGGEKR LKLATVSKIV PGQRTAVFQR YLRPDKDYLS FSLIYSNRKR
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain [Source:TAIR;Acc:AT5G42140]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.