Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20113 | Canola | endoplasmic reticulum, extracellular | 96.37 | 96.48 |
| CDY56827 | Canola | cytosol | 53.51 | 92.66 |
| CDX97668 | Canola | cytosol | 53.51 | 92.66 |
| AT3G15430.2 | Thale cress | cytosol | 53.15 | 89.96 |
| PGSC0003DMT400003817 | Potato | cytosol | 33.29 | 71.99 |
| KRH22127 | Soybean | cytosol | 41.65 | 70.93 |
| VIT_19s0014g03080.t01 | Wine grape | cytosol | 41.65 | 69.92 |
| PGSC0003DMT400032346 | Potato | plasma membrane | 39.83 | 68.26 |
| Solyc07g063300.2.1 | Tomato | plasma membrane | 40.07 | 68.11 |
| KRH27216 | Soybean | cytosol | 41.04 | 67.13 |
| GSMUA_Achr5P12060_001 | Banana | mitochondrion | 34.5 | 63.05 |
| GSMUA_Achr1P00100_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.92 | 61.99 |
| Zm00001d019595_P001 | Maize | cytosol | 36.2 | 61.9 |
| KXG35074 | Sorghum | cytosol | 36.2 | 61.9 |
| TraesCS2B01G254900.2 | Wheat | cytosol | 35.96 | 61.36 |
| TraesCS2D01G241400.2 | Wheat | cytosol | 35.96 | 61.36 |
| Zm00001d005395_P001 | Maize | cytosol | 35.84 | 61.28 |
| TraesCS2A01G236300.4 | Wheat | cytosol | 35.84 | 60.29 |
| GSMUA_Achr2P10610_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.47 | 59.55 |
| KRH49501 | Soybean | cytosol | 11.74 | 56.07 |
| CDY04192 | Canola | cytosol | 15.74 | 26.42 |
| CDY39172 | Canola | cytosol | 15.62 | 26.22 |
| CDY43762 | Canola | cytosol | 13.44 | 25.93 |
| CDY69131 | Canola | cytosol | 10.05 | 25.86 |
| CDX84451 | Canola | cytosol | 13.68 | 25.34 |
| CDY60046 | Canola | cytosol | 13.68 | 25.22 |
| CDY28863 | Canola | cytosol | 15.86 | 25.19 |
| CDX81201 | Canola | cytosol | 13.32 | 25.0 |
| CDY56518 | Canola | cytosol, plastid | 15.62 | 24.81 |
| CDY31347 | Canola | cytosol | 13.08 | 24.77 |
| CDY01845 | Canola | plastid | 15.5 | 24.76 |
| CDX96062 | Canola | plastid | 15.5 | 24.71 |
| CDX83586 | Canola | cytosol, plastid | 15.62 | 24.39 |
| CDY13609 | Canola | cytosol | 15.62 | 24.39 |
| CDX99731 | Canola | cytosol, plastid | 15.74 | 24.3 |
| CDY34733 | Canola | cytosol | 9.56 | 23.58 |
| CDY40988 | Canola | cytosol, plastid | 15.5 | 23.32 |
| CDY39843 | Canola | cytosol | 11.38 | 23.27 |
| CDY46423 | Canola | cytosol | 10.65 | 23.22 |
| CDX69479 | Canola | cytosol | 10.9 | 22.67 |
| CDY26488 | Canola | cytosol | 10.77 | 22.36 |
| CDY16215 | Canola | cytosol | 10.41 | 22.28 |
| CDY44785 | Canola | mitochondrion | 10.9 | 20.79 |
| CDY40735 | Canola | mitochondrion | 10.9 | 20.59 |
| CDY57523 | Canola | cytosol | 11.26 | 19.75 |
| CDY43240 | Canola | cytosol | 11.26 | 19.7 |
| CDY02190 | Canola | mitochondrion | 9.93 | 18.51 |
| CDY51633 | Canola | mitochondrion | 9.93 | 18.47 |
| CDY70949 | Canola | cytosol | 7.02 | 16.38 |
| CDY66504 | Canola | cytosol | 15.13 | 15.15 |
| CDY14709 | Canola | nucleus | 11.74 | 14.04 |
| CDX85076 | Canola | cytosol | 15.38 | 12.24 |
| CDX77534 | Canola | cytosol | 16.22 | 12.06 |
| CDY28580 | Canola | plasma membrane | 15.13 | 11.97 |
| CDX88324 | Canola | cytosol | 15.38 | 11.97 |
| CDY47138 | Canola | cytosol | 15.13 | 11.94 |
| CDX87557 | Canola | cytosol | 15.5 | 11.93 |
| CDX69686 | Canola | nucleus | 15.38 | 11.87 |
| CDY21795 | Canola | cytosol | 13.68 | 11.81 |
| CDX77871 | Canola | cytosol | 13.56 | 11.8 |
| CDY31624 | Canola | cytosol | 14.04 | 11.8 |
| CDY11586 | Canola | cytosol | 15.01 | 11.78 |
| CDX91165 | Canola | nucleus | 15.25 | 11.74 |
| CDY12764 | Canola | cytosol | 14.89 | 11.74 |
| CDY48550 | Canola | cytosol | 13.92 | 11.73 |
| CDY44086 | Canola | plasma membrane, vacuole | 14.89 | 11.69 |
| CDX97187 | Canola | nucleus | 14.89 | 11.63 |
| CDX85690 | Canola | nucleus | 15.01 | 11.59 |
| CDX92532 | Canola | nucleus | 15.38 | 11.4 |
| CDX87989 | Canola | cytosol | 13.8 | 11.38 |
| CDY13998 | Canola | nucleus | 15.25 | 11.29 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 15.38 | 11.19 |
| CDY49416 | Canola | cytosol | 15.01 | 11.08 |
| CDX70876 | Canola | cytosol | 14.65 | 10.85 |
| CDX87986 | Canola | cytosol | 2.54 | 10.19 |
| CDX68076 | Canola | cytosol | 7.87 | 7.83 |
Protein Annotations
| Gene3D:2.130.10.30 | MapMan:35.1 | UniProt:A0A078G5V3 | EnsemblPlants:CDY21840 | ProteinID:CDY21840 | ProteinID:CDY21840.1 |
| EnsemblPlantsGene:GSBRNA2T00018133001 | InterPro:IPR000408 | InterPro:IPR009091 | PFAM:PF00415 | PFAM:PF13540 | PRINTS:PR00633 |
| ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF302 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SUPFAM:SSF50985 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF1C0D | SEG:seg | : |
Description
BnaC01g36080DBnaC01g36080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5V3]
Coordinates
chrLK032125:+:111539..117617
Molecular Weight (calculated)
87901.4 Da
IEP (calculated)
7.589
GRAVY (calculated)
-0.269
Length
826 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGHQGKCF GFVLLLCFFS STFARGILKD LDHVVKPGKV SLREQDHGLF SLEPDHKVKP GHKLQSAWWG EPEEPEDKVK PDHKLQSMWR ELEAPDPEKK
101: HAHKVMPDYK EKLNDGGKEK IDDIERPDHK PDHVVKPNYK EKLNDKEKID GIEKPDHTVK PMGYGYGVGY GSGGSGFGEG IGSSGGSGFG EGIGSSGGSG
201: FGEGIGSSGG SGFGEGIGYG DGSGVGIGEG RGSGYGQPNC GPVRGAPGTG FGEGIGRGSG SGEGIGIGRG GSGSTGVPSV VVPPITVPGT TIPPITVPGT
301: HIPGFTIPGV TVPGFGTGGG CQTGEFRWSF ENSLLRKMAE RNWLVSLEDL PSHLILEVLT SRRLNAVDLL SLELTSKVFG GSSGLSYPLK FRSLVDYAAS
401: QLCSVHPVYV GMGLTTQKEL FANCEGNWKR LLRFLQSVEQ SSDMVQTSAG NMQVTTGRYH TLLINNSKVY SCGSSLSGVL AHGPETTQCV AFTPIEFPLS
501: AKVAQVSATQ NHSAFVLQSG EVLTCGDNSS HCCGHLDTSR PIFRPKLVEA LKGTPCKQVA AGLHFTVFLS REGRVFTCGS NTHGQLGHGD TLDSPIPRAV
601: EFFQSVGPVV QIAAGPSYVL AVTQDGSVYS FGSGSSFCLG HGEQQDEHQP RVIQAFKRKG VHILRVSAGD EHAVAFDSNG QVYTWGKGYC GALGHGDEND
701: KITPQVLVSL NNCLVVQVCA RKRKTFVLVE GGVLYGFGWM GFGSLGFPDR GVSDKVLRPR VLESLKPHRV SQVSTGLYHT IVVTQTGRIF GFGDNERAQL
801: GHGSLRTCLE PTEIFLHCGR SRNQLC
101: HAHKVMPDYK EKLNDGGKEK IDDIERPDHK PDHVVKPNYK EKLNDKEKID GIEKPDHTVK PMGYGYGVGY GSGGSGFGEG IGSSGGSGFG EGIGSSGGSG
201: FGEGIGSSGG SGFGEGIGYG DGSGVGIGEG RGSGYGQPNC GPVRGAPGTG FGEGIGRGSG SGEGIGIGRG GSGSTGVPSV VVPPITVPGT TIPPITVPGT
301: HIPGFTIPGV TVPGFGTGGG CQTGEFRWSF ENSLLRKMAE RNWLVSLEDL PSHLILEVLT SRRLNAVDLL SLELTSKVFG GSSGLSYPLK FRSLVDYAAS
401: QLCSVHPVYV GMGLTTQKEL FANCEGNWKR LLRFLQSVEQ SSDMVQTSAG NMQVTTGRYH TLLINNSKVY SCGSSLSGVL AHGPETTQCV AFTPIEFPLS
501: AKVAQVSATQ NHSAFVLQSG EVLTCGDNSS HCCGHLDTSR PIFRPKLVEA LKGTPCKQVA AGLHFTVFLS REGRVFTCGS NTHGQLGHGD TLDSPIPRAV
601: EFFQSVGPVV QIAAGPSYVL AVTQDGSVYS FGSGSSFCLG HGEQQDEHQP RVIQAFKRKG VHILRVSAGD EHAVAFDSNG QVYTWGKGYC GALGHGDEND
701: KITPQVLVSL NNCLVVQVCA RKRKTFVLVE GGVLYGFGWM GFGSLGFPDR GVSDKVLRPR VLESLKPHRV SQVSTGLYHT IVVTQTGRIF GFGDNERAQL
801: GHGSLRTCLE PTEIFLHCGR SRNQLC
001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
Arabidopsis Description
MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.