Factsheet for TraesCS2A01G236300.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G241400.2	Wheat	cytosol	98.17	99.59
TraesCS2B01G254900.2	Wheat	cytosol	97.35	98.76
KXG35074	Sorghum	cytosol	87.58	89.03
Zm00001d019595_P001	Maize	cytosol	86.97	88.41
Zm00001d005395_P001	Maize	cytosol	85.13	86.54
GSMUA_Achr1P00100_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.34	74.19
GSMUA_Achr5P12060_001	Banana	mitochondrion	68.23	74.11
PGSC0003DMT400003817	Potato	cytosol	54.18	69.63
GSMUA_Achr2P10610_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.84	68.7
VIT_19s0014g03080.t01	Wine grape	cytosol	67.62	67.48
KRH22127	Soybean	cytosol	63.95	64.74
PGSC0003DMT400032346	Potato	plasma membrane	63.14	64.32
Solyc07g063300.2.1	Tomato	plasma membrane	63.14	63.79
CDX97668	Canola	cytosol	61.1	62.89
CDY56827	Canola	cytosol	60.69	62.47
Bra027244.1-P	Field mustard	cytosol	61.1	61.22
AT3G15430.2	Thale cress	cytosol	60.49	60.86
KRH27216	Soybean	cytosol	62.32	60.59
KRH49501	Soybean	cytosol	18.53	52.6
Bra021109.1-P	Field mustard	endoplasmic reticulum, extracellular	60.69	36.25
CDY20113	Canola	endoplasmic reticulum, extracellular	60.29	35.88
CDY21840	Canola	endoplasmic reticulum, extracellular	60.29	35.84
TraesCS2A01G306400.3	Wheat	cytosol	23.22	25.73
TraesCS7A01G284800.1	Wheat	cytosol	19.76	24.31
TraesCS3A01G319000.1	Wheat	cytosol	19.76	23.66
TraesCS6A01G153100.1	Wheat	golgi	22.2	23.19
TraesCS1A01G076400.1	Wheat	mitochondrion	18.13	21.24
TraesCS5A01G364400.2	Wheat	mitochondrion	17.31	19.41
TraesCS5A01G173400.1	Wheat	cytosol	18.74	19.21
TraesCS3A01G512900.1	Wheat	cytosol	24.24	13.06
TraesCS6A01G261000.1	Wheat	cytosol	23.83	12.81
TraesCS7A01G185400.1	Wheat	cytosol	26.27	12.75
TraesCS1A01G240600.2	Wheat	cytosol	28.11	12.58
TraesCS2A01G581400.1	Wheat	cytosol	27.09	12.43
TraesCS1A01G020400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	22.81	12.35
TraesCS1A01G366800.1	Wheat	cytosol	25.25	11.88
TraesCS2A01G456700.1	Wheat	cytosol, nucleus, peroxisome	23.22	10.84

Protein Annotations

EnsemblPlants:TraesCS2A01G236300.4	EnsemblPlantsGene:TraesCS2A01G236300	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF302	PFAM:PF00415	PFAM:PF13540	PFscan:PS50012
PRINTS:PR00633	ScanProsite:PS00626	SUPFAM:SSF50985	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2A:+:303730478..303740626

Molecular Weight (calculated)

52111.1 Da

IEP (calculated)

7.894

GRAVY (calculated)

-0.008

Length

491 amino acids

Sequence
(BLAST)

001: MAGEKSPRAF SMEELPGHLI GEVLSSGRLA AGDLARLEGT CRALRPLAEQ AASRLCAARM ACSVIGPAAR GELLARCGGS WKKVLRFLQS VEQSFDTVHT
101: SSGNMQVATG RYHTLLVHDS SVYSCGSSLC GVLGHGPDTT QCVAFSRVSF PSLARVVNIS AFHNHAAFVT ESGEVFTCGD NSSACCGHGD VGRTIFRPTQ
201: ILALKGISCK QVATGLSFTV ILTRKGLVYT CGSNTHGQLG HGDTTDRAAP KIVELFKGPS PVVQVAAGAS YTFAVTDDGT VYSFGSCTNF CLGHGDQHNE
301: LLPRAIQSFK RRNILVVRVS AGDEHAVALD ALGYKSDFSL QVYTWGRGYC GALGHGDEND KTSPELIAGL KGQVGVQVCA RKRKTFVLTD EGSVFAFGWM
401: GFGSLGFPDR GSSDKVMQPR VLDSLSGHYV SQISTGLYHT VAVTNKGIVF GFGDNERAQL GQEFIRGCLK PTEIMFDKSS IEDIAIAAPS G

Best Arabidopsis Sequence Match ( AT3G15430.6 )
(BLAST)

001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC

Arabidopsis Description

MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.