Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 93.73 | 96.38 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 94.01 | 95.93 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 92.97 | 84.68 |
| Os04t0583700-00 | Rice | cytosol | 70.34 | 71.57 |
| KXG26989 | Sorghum | cytosol | 67.02 | 66.07 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 55.23 | 63.64 |
| Zm00001d002544_P004 | Maize | cytosol, endoplasmic reticulum, nucleus | 65.87 | 62.43 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 43.25 | 50.95 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 44.2 | 47.94 |
| CDX87986 | Canola | cytosol | 9.32 | 47.57 |
| Solyc02g036390.1.1 | Tomato | cytosol | 33.84 | 45.35 |
| AT1G65920.1 | Thale cress | cytosol | 39.83 | 41.65 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 39.35 | 41.19 |
| CDY31624 | Canola | cytosol | 38.4 | 41.1 |
| Bra038181.1-P | Field mustard | cytosol | 38.78 | 40.72 |
| CDX87989 | Canola | cytosol | 38.31 | 40.22 |
| PGSC0003DMT400043094 | Potato | nucleus | 40.97 | 40.06 |
| KRH30884 | Soybean | cytosol | 40.59 | 39.76 |
| KRG98005 | Soybean | cytosol | 40.21 | 39.53 |
| TraesCS1A01G240600.2 | Wheat | cytosol | 38.59 | 37.01 |
| TraesCS7A01G185400.1 | Wheat | cytosol | 33.27 | 34.59 |
| TraesCS1A01G020400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.99 | 33.63 |
| TraesCS2A01G581400.1 | Wheat | cytosol | 34.03 | 33.46 |
| TraesCS1A01G366800.1 | Wheat | cytosol | 33.17 | 33.43 |
| TraesCS3A01G512900.1 | Wheat | cytosol | 28.8 | 33.26 |
| TraesCS2A01G306400.3 | Wheat | cytosol | 12.55 | 29.8 |
| TraesCS5A01G364400.2 | Wheat | mitochondrion | 12.26 | 29.45 |
| TraesCS6A01G153100.1 | Wheat | golgi | 12.17 | 27.23 |
| TraesCS1A01G076400.1 | Wheat | mitochondrion | 10.36 | 26.01 |
| TraesCS7A01G284800.1 | Wheat | cytosol | 9.32 | 24.56 |
| TraesCS3A01G319000.1 | Wheat | cytosol | 9.32 | 23.9 |
| TraesCS5A01G173400.1 | Wheat | cytosol | 10.74 | 23.59 |
| TraesCS2A01G236300.4 | Wheat | cytosol | 10.84 | 23.22 |
| Solyc02g081250.1.1 | Tomato | cytosol | 40.87 | 20.6 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR011993 |
| InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 |
| InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2A01G456700 | EnsemblPlants:TraesCS2A01G456700.1 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 | TIGR:cd13365 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:-:705504543..705509310
Molecular Weight (calculated)
115717.0 Da
IEP (calculated)
9.391
GRAVY (calculated)
-0.396
Length
1052 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGSFDGRVP TRGVEQAIVA LKKGAHLLKC GKRGKPKFCP FRLSSLKLSQ VHRSVTVMGI FLSFAGNKDE KTLVWYSKDR EKHLSLNSVS TVILGQKTTN
0101: FCRQRWPEKE HQSLSLVYRN GECSLDLICR DRDQAECWHL GLTALISGPS SPFSSVGSKS SRQMTSCTST PRSYIQRKSK LSAVHDTPRH KQVYPSYGSP
0201: RMTQKDLFGG YLDCSEALFY QRQRTFSDVD SYLERLSPKV ANPVRHSLKD ILVANNKHKT QTISRTPKVK AFEGPRAACR LDSLKDVFLW GDVVGSALDS
0301: EDIPKALPRL VGSTKMLDVQ SIACGENHAA IITKQGEVFS WGKESGRKLG HKVNDSAQCP KMVESLASVH VKAVAFGSKH TCAVTVSGEL FEWGEGAHGL
0401: GLLNNWHGRN QWLPHKLFGP MDNISVSKIA CGDWHTAIIT SSGQLFTYGD GTFGVLGHGD RQGIARPKEV ESLKGLRVKS VACGPWHTAA IVEGMSSVKC
0501: NAPIGNLFTW GDADKGKLGH ADKKMKLVPT CVDSLISHDF LQVSCGMALT VALTSNGVVF TIGSSKHGQL GNPQADGESV CTVGGVLKNE FVTEISSGSS
0601: HVAVLTMNGK VFTWGKGADG QLGLGDYANR SSPTLVEALE GRQVQSIACG SNFSAAICLH KGISVKDQPI CSRCQMVFNF TRKKHNCYNC GSMFCNSCSS
0701: NKTANSALAP DRNRRYRVCD ACFCQLEKAL YSGEVKPQPK ISKGEMFKAE IMAYTPKLSR LFKEANLIVE KMASVQGPNQ RNVDSAVPIQ VKTQRWGQVE
0801: CPAQFLSAQD NFRHQLVPDN QMSGVSFSQR MHDAVGLKAG NPLRQSTDSQ RDELSMMERI LTEEVKQLRS QVTTLAEQCQ QKNLVVQVYK QRLDETWLIV
0901: RDEAAKCKAA KDIIKVLTNQ CNALSAKLSV GQQPENSKMT PNSIPEQAPS PGATDRSFSH QNIARTFDRD GYTTEADSVD TPVEGVIEQI ERGVYVTLAV
1001: SPGGRKDIRR IRFSRKHFGE KAAQCWWEEN KSRVYANYSS VEQVATPHPN RA
0101: FCRQRWPEKE HQSLSLVYRN GECSLDLICR DRDQAECWHL GLTALISGPS SPFSSVGSKS SRQMTSCTST PRSYIQRKSK LSAVHDTPRH KQVYPSYGSP
0201: RMTQKDLFGG YLDCSEALFY QRQRTFSDVD SYLERLSPKV ANPVRHSLKD ILVANNKHKT QTISRTPKVK AFEGPRAACR LDSLKDVFLW GDVVGSALDS
0301: EDIPKALPRL VGSTKMLDVQ SIACGENHAA IITKQGEVFS WGKESGRKLG HKVNDSAQCP KMVESLASVH VKAVAFGSKH TCAVTVSGEL FEWGEGAHGL
0401: GLLNNWHGRN QWLPHKLFGP MDNISVSKIA CGDWHTAIIT SSGQLFTYGD GTFGVLGHGD RQGIARPKEV ESLKGLRVKS VACGPWHTAA IVEGMSSVKC
0501: NAPIGNLFTW GDADKGKLGH ADKKMKLVPT CVDSLISHDF LQVSCGMALT VALTSNGVVF TIGSSKHGQL GNPQADGESV CTVGGVLKNE FVTEISSGSS
0601: HVAVLTMNGK VFTWGKGADG QLGLGDYANR SSPTLVEALE GRQVQSIACG SNFSAAICLH KGISVKDQPI CSRCQMVFNF TRKKHNCYNC GSMFCNSCSS
0701: NKTANSALAP DRNRRYRVCD ACFCQLEKAL YSGEVKPQPK ISKGEMFKAE IMAYTPKLSR LFKEANLIVE KMASVQGPNQ RNVDSAVPIQ VKTQRWGQVE
0801: CPAQFLSAQD NFRHQLVPDN QMSGVSFSQR MHDAVGLKAG NPLRQSTDSQ RDELSMMERI LTEEVKQLRS QVTTLAEQCQ QKNLVVQVYK QRLDETWLIV
0901: RDEAAKCKAA KDIIKVLTNQ CNALSAKLSV GQQPENSKMT PNSIPEQAPS PGATDRSFSH QNIARTFDRD GYTTEADSVD TPVEGVIEQI ERGVYVTLAV
1001: SPGGRKDIRR IRFSRKHFGE KAAQCWWEEN KSRVYANYSS VEQVATPHPN RA
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.