Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400043094 | Potato | nucleus | 49.26 | 95.54 |
| Solyc02g036390.1.1 | Tomato | cytosol | 26.4 | 70.19 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 28.85 | 59.9 |
| CDX87986 | Canola | cytosol | 5.65 | 57.28 |
| KRG98005 | Soybean | cytosol | 26.74 | 52.15 |
| KRH30884 | Soybean | cytosol | 26.64 | 51.77 |
| AT1G65920.1 | Thale cress | cytosol | 24.53 | 50.89 |
| CDY31624 | Canola | cytosol | 23.67 | 50.25 |
| Bra038181.1-P | Field mustard | cytosol | 23.91 | 49.8 |
| CDX87989 | Canola | cytosol | 23.81 | 49.6 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 20.84 | 48.71 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 21.27 | 45.77 |
| Solyc05g007280.2.1 | Tomato | cytosol | 1.29 | 45.76 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 19.41 | 44.36 |
| Zm00001d017641_P004 | Maize | cytosol | 17.97 | 43.55 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 20.7 | 42.23 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 20.7 | 41.9 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 21.23 | 41.52 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 21.04 | 41.38 |
| TraesCS2A01G456700.1 | Wheat | cytosol, nucleus, peroxisome | 20.6 | 40.87 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 20.7 | 40.49 |
| Solyc11g065120.1.1 | Tomato | cytosol | 21.37 | 39.5 |
| Os04t0583700-00 | Rice | cytosol | 19.5 | 39.36 |
| Solyc12g099740.1.1 | Tomato | nucleus | 19.26 | 39.22 |
| KXG26989 | Sorghum | cytosol | 20.03 | 39.18 |
| Zm00001d051479_P005 | Maize | nucleus | 20.12 | 39.03 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 19.89 | 38.68 |
| Zm00001d002544_P004 | Maize | cytosol, endoplasmic reticulum, nucleus | 20.22 | 38.02 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 20.65 | 37.32 |
| Solyc03g116360.1.1 | Tomato | cytosol | 16.2 | 35.73 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 18.26 | 35.57 |
| Solyc04g071040.2.1 | Tomato | cytosol | 18.59 | 34.46 |
| Solyc05g007290.1.1 | Tomato | endoplasmic reticulum | 16.58 | 34.29 |
| Solyc05g018620.2.1 | Tomato | cytosol | 4.46 | 30.29 |
| Solyc05g006940.2.1 | Tomato | cytosol | 5.37 | 28.43 |
| Solyc07g042980.2.1 | Tomato | cytosol | 3.31 | 28.4 |
| Solyc05g056590.2.1 | Tomato | cytosol | 3.69 | 28.0 |
| Solyc07g063300.2.1 | Tomato | plasma membrane | 5.99 | 25.72 |
| Solyc07g042970.2.1 | Tomato | mitochondrion | 2.92 | 25.31 |
| Solyc02g085780.2.1 | Tomato | cytosol | 4.7 | 25.13 |
| Solyc02g089220.2.1 | Tomato | mitochondrion | 3.83 | 24.24 |
| Solyc05g014030.2.1 | Tomato | cytosol | 5.85 | 22.89 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N |
| InterPro:Brevis_radix_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046872 |
| InterPro:IPR000408 | InterPro:IPR002885 | InterPro:IPR009091 | InterPro:IPR011990 | InterPro:IPR011993 | InterPro:IPR013083 |
| InterPro:IPR013591 | InterPro:IPR017455 | UniProt:K4B9Z5 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF01535 |
| PFAM:PF08381 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13713 | InterPro:PH-like_dom_sf | PRINTS:PR00633 |
| ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51375 | PFscan:PS51514 | PANTHER:PTHR22870 |
| PANTHER:PTHR22870:SF177 | InterPro:Pentatricopeptide_repeat | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc02g081250.1 | EnsemblPlants:Solyc02g081250.1.1 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI00027675CA | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
No Description!
Coordinates
chr2:+:45279068..45289840
Molecular Weight (calculated)
233170.0 Da
IEP (calculated)
7.901
GRAVY (calculated)
-0.240
Length
2087 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEEHLTIDP SDRAVEQAIV ALKKGAHLLK YGRRGKPKFY PLRLSADEKF LIWYSGEKEN QLRLSSITNV IRGQSTVIIQ PEMENQCISL IYGNGERTLD
0101: LICKDKMQAE TWFVGLRAVI SRTHHHRMVD SLKSKRGTHS CISSPAGYMR RKQNLGLSAK TIRLSQVRSL AGSPTQSFSE RCFTDGLSCS SESFFSESSL
0201: SNVMDNFTSC SSYFEPDDLS QTRASCAGTE IQTDMLAPLL PSSNESRPFG KNILRDVFIW GEGAEGGCLG VGEVKLDALS PKLLESTVML DVQAISIGRS
0301: HASIVTKQGE VFCWGEGKNG RLGHKHDMDT ARPKLVDSLN GVRVKSVSCG EYQTCALTFS GELYTWGDNS LCAELVGEEK KRSHWLPNRV CGSLGGVKIS
0401: YVACAEWHTA IVSTSGQLFT YGDGTFGVLG HGNLQSVAQP KEVESLRGLW VKCVACGPWH TAAVVEVIVD RLKFNNPGGK LFTWGDGDKG RLGHPGEETK
0501: LLPTCVAKLV DHDFIQVSCA STLTAALSST GKVYMMGSAV HGQLGNPEAK DKSLVLVQGK LREEFITEIS SGSYHVAVLT SRGSVYTWGK GENGQLGLGD
0601: TKDRSWPTLV ESLRDRQVEH IACGSSTTAA ICLHKSASST DQSSCKGCNM SFGITRKKQN CYNCGLLFCR TCCSKKTPNA SLAPDKTKAF RVCDPCFYQL
0701: QRIAQSSRSS KLENRSPRPL PITIKAVTCE KVERDEADTT SSRMMSTKKY LTENNQCFDR RSANSLGESR QFSDPVTSLM DSFPRWGQVP CPKVFRRDYV
0801: QMRTQNPHLR NSLASASPTY FVEPKVVLSA GLTMEEDFQE SEKILLKEVC KLRTQVESLE RLCETRKEKI QESQQKVEEA WSVAKEEASK SKAAKEVIKA
0901: LTSRLQAMSE SFFAGAEANV QAIANVLQTT STYSDSQNHT SGHRIVVPVA NTQLEERNVD SLCGSPIVFS STLRSFYNKE DNVESRSTEE SCKETDHVQA
1001: GIRTSKVEWV EQYQLGVFIT LTILPSGNKG LKRVRFSRKK FTEKEAKKWW EENQLSVYKK YDVEGYENVN QVLLKNIGKI TECPFTCHLN PGCRPAPPQR
1101: HKTLSRRMTL KLFKCALPIR FLGNTFKISS RFMCADNKLD ELVDSLLKFP EDECTPQEEN KLKESSFSVQ ELGVLQDSIL SSVSSKTDTG KFPEDVFLMI
1201: NAIRNGNDGF GERTEKALRS FREKLNPGLV VDVLRNIHNP ELGVKFFKWA GRQIGYVHNA SVYDALLDLI GCVGVPQHLF NDIGKDDKEV LGKLLNVLIR
1301: KCCRNGWWNS ALEELGRLKD SGFKPSAATY NALVQVFLQV DRLETASLIY KEMSELNFKM DKHTINSFTR SLCKVGKWRD ALDLIDKEEF VPDTVIYTNM
1401: ISGLCEGSFF EEAMNFLNLM RTISCIPNTV TYQVLLCALL NRRKLGRIKR VLNLMISEGC YPGQKIFNSL VHAYCRSGDY WYAYKLLKKM DGCGCQPGYV
1501: VYNILIGGIC GNEELPSKDV LELAENVYSE MLTARLVLNK VNVVNFARCL CAFGKYEDAF SVIKEMMSKG FVPDVSTYSK VIGFLCNASK VDKAFLLFRE
1601: MKRNGIVPDV YTYTILIDSF CKSGLIQQAR NWLNEMIQKG CTPNVVTYTA IIHAYLKQRK ISDANELFES MLMQGCIPNV VTFTALIDGY CKAGHLEKAC
1701: QIYARMKGSL DTPEVDSYFK VNLDGNNEPN IVTFGAMVDG LCKAHKVKEA HNLLDIMLAE GCEPNHIVYD ALIDGFCKVG KLDDAQEIFA KMSECGYSPS
1801: IYTYSSLIDR LFKDKHLDLA VKVLSKMLES SCPPNVVIYT EMVDGLCKVG KLDEAYKLML MMEEKGCHPN VVTYTAMIDG FGKAGKVNKC LELIESMGNK
1901: GCAPNYITYS VAIKHCCAAG FLDEALQLLE EMKQISWPKH MASHLKVIEG FRREYLVSLG ILEDMSDNNF LPVIPVYRLL IDRYQKAGRL ESAVELLKEI
2001: SSSSPFPHLD KRMYSSLIEC LSVSNKIDLA FELYVDMMNK GAVPELTDFV NLIKGLISMN KWENALELSE SLYYMLHASK STTIQLL
0101: LICKDKMQAE TWFVGLRAVI SRTHHHRMVD SLKSKRGTHS CISSPAGYMR RKQNLGLSAK TIRLSQVRSL AGSPTQSFSE RCFTDGLSCS SESFFSESSL
0201: SNVMDNFTSC SSYFEPDDLS QTRASCAGTE IQTDMLAPLL PSSNESRPFG KNILRDVFIW GEGAEGGCLG VGEVKLDALS PKLLESTVML DVQAISIGRS
0301: HASIVTKQGE VFCWGEGKNG RLGHKHDMDT ARPKLVDSLN GVRVKSVSCG EYQTCALTFS GELYTWGDNS LCAELVGEEK KRSHWLPNRV CGSLGGVKIS
0401: YVACAEWHTA IVSTSGQLFT YGDGTFGVLG HGNLQSVAQP KEVESLRGLW VKCVACGPWH TAAVVEVIVD RLKFNNPGGK LFTWGDGDKG RLGHPGEETK
0501: LLPTCVAKLV DHDFIQVSCA STLTAALSST GKVYMMGSAV HGQLGNPEAK DKSLVLVQGK LREEFITEIS SGSYHVAVLT SRGSVYTWGK GENGQLGLGD
0601: TKDRSWPTLV ESLRDRQVEH IACGSSTTAA ICLHKSASST DQSSCKGCNM SFGITRKKQN CYNCGLLFCR TCCSKKTPNA SLAPDKTKAF RVCDPCFYQL
0701: QRIAQSSRSS KLENRSPRPL PITIKAVTCE KVERDEADTT SSRMMSTKKY LTENNQCFDR RSANSLGESR QFSDPVTSLM DSFPRWGQVP CPKVFRRDYV
0801: QMRTQNPHLR NSLASASPTY FVEPKVVLSA GLTMEEDFQE SEKILLKEVC KLRTQVESLE RLCETRKEKI QESQQKVEEA WSVAKEEASK SKAAKEVIKA
0901: LTSRLQAMSE SFFAGAEANV QAIANVLQTT STYSDSQNHT SGHRIVVPVA NTQLEERNVD SLCGSPIVFS STLRSFYNKE DNVESRSTEE SCKETDHVQA
1001: GIRTSKVEWV EQYQLGVFIT LTILPSGNKG LKRVRFSRKK FTEKEAKKWW EENQLSVYKK YDVEGYENVN QVLLKNIGKI TECPFTCHLN PGCRPAPPQR
1101: HKTLSRRMTL KLFKCALPIR FLGNTFKISS RFMCADNKLD ELVDSLLKFP EDECTPQEEN KLKESSFSVQ ELGVLQDSIL SSVSSKTDTG KFPEDVFLMI
1201: NAIRNGNDGF GERTEKALRS FREKLNPGLV VDVLRNIHNP ELGVKFFKWA GRQIGYVHNA SVYDALLDLI GCVGVPQHLF NDIGKDDKEV LGKLLNVLIR
1301: KCCRNGWWNS ALEELGRLKD SGFKPSAATY NALVQVFLQV DRLETASLIY KEMSELNFKM DKHTINSFTR SLCKVGKWRD ALDLIDKEEF VPDTVIYTNM
1401: ISGLCEGSFF EEAMNFLNLM RTISCIPNTV TYQVLLCALL NRRKLGRIKR VLNLMISEGC YPGQKIFNSL VHAYCRSGDY WYAYKLLKKM DGCGCQPGYV
1501: VYNILIGGIC GNEELPSKDV LELAENVYSE MLTARLVLNK VNVVNFARCL CAFGKYEDAF SVIKEMMSKG FVPDVSTYSK VIGFLCNASK VDKAFLLFRE
1601: MKRNGIVPDV YTYTILIDSF CKSGLIQQAR NWLNEMIQKG CTPNVVTYTA IIHAYLKQRK ISDANELFES MLMQGCIPNV VTFTALIDGY CKAGHLEKAC
1701: QIYARMKGSL DTPEVDSYFK VNLDGNNEPN IVTFGAMVDG LCKAHKVKEA HNLLDIMLAE GCEPNHIVYD ALIDGFCKVG KLDDAQEIFA KMSECGYSPS
1801: IYTYSSLIDR LFKDKHLDLA VKVLSKMLES SCPPNVVIYT EMVDGLCKVG KLDEAYKLML MMEEKGCHPN VVTYTAMIDG FGKAGKVNKC LELIESMGNK
1901: GCAPNYITYS VAIKHCCAAG FLDEALQLLE EMKQISWPKH MASHLKVIEG FRREYLVSLG ILEDMSDNNF LPVIPVYRLL IDRYQKAGRL ESAVELLKEI
2001: SSSSPFPHLD KRMYSSLIEC LSVSNKIDLA FELYVDMMNK GAVPELTDFV NLIKGLISMN KWENALELSE SLYYMLHASK STTIQLL
001: MNKTVVRCLL SRSHHPLIHF STNLSLLHRV FTCSRYLTAR FMSTPPPDDM FGFDDPFSPS DSREVVDLTK EYSFLHDSLV DYGNVNVHQV VPIITQSSID
101: ARAIADAVSG VDDVFGRKSQ KFLRQFREKL SESLVIEVLR LIARPSAVIS FFVWAGRQIG YKHTAPVYNA LVDLIVRDDD EKVPEEFLQQ IRDDDKEVFG
201: EFLNVLVRKH CRNGSFSIAL EELGRLKDFR FRPSRSTYNC LIQAFLKADR LDSASLIHRE MSLANLRMDG FTLRCFAYSL CKVGKWREAL TLVETENFVP
301: DTVFYTKLIS GLCEASLFEE AMDFLNRMRA TSCLPNVVTY STLLCGCLNK KQLGRCKRVL NMMMMEGCYP SPKIFNSLVH AYCTSGDHSY AYKLLKKMVK
401: CGHMPGYVVY NILIGSICGD KDSLNCDLLD LAEKAYSEML AAGVVLNKIN VSSFTRCLCS AGKYEKAFSV IREMIGQGFI PDTSTYSKVL NYLCNASKME
501: LAFLLFEEMK RGGLVADVYT YTIMVDSFCK AGLIEQARKW FNEMREVGCT PNVVTYTALI HAYLKAKKVS YANELFETML SEGCLPNIVT YSALIDGHCK
601: AGQVEKACQI FERMCGSKDV PDVDMYFKQY DDNSERPNVV TYGALLDGFC KSHRVEEARK LLDAMSMEGC EPNQIVYDAL IDGLCKVGKL DEAQEVKTEM
701: SEHGFPATLY TYSSLIDRYF KVKRQDLASK VLSKMLENSC APNVVIYTEM IDGLCKVGKT DEAYKLMQMM EEKGCQPNVV TYTAMIDGFG MIGKIETCLE
801: LLERMGSKGV APNYVTYRVL IDHCCKNGAL DVAHNLLEEM KQTHWPTHTA GYRKVIEGFN KEFIESLGLL DEIGQDDTAP FLSVYRLLID NLIKAQRLEM
901: ALRLLEEVAT FSATLVDYSS TYNSLIESLC LANKVETAFQ LFSEMTKKGV IPEMQSFCSL IKGLFRNSKI SEALLLLDFI SHMVCPL
101: ARAIADAVSG VDDVFGRKSQ KFLRQFREKL SESLVIEVLR LIARPSAVIS FFVWAGRQIG YKHTAPVYNA LVDLIVRDDD EKVPEEFLQQ IRDDDKEVFG
201: EFLNVLVRKH CRNGSFSIAL EELGRLKDFR FRPSRSTYNC LIQAFLKADR LDSASLIHRE MSLANLRMDG FTLRCFAYSL CKVGKWREAL TLVETENFVP
301: DTVFYTKLIS GLCEASLFEE AMDFLNRMRA TSCLPNVVTY STLLCGCLNK KQLGRCKRVL NMMMMEGCYP SPKIFNSLVH AYCTSGDHSY AYKLLKKMVK
401: CGHMPGYVVY NILIGSICGD KDSLNCDLLD LAEKAYSEML AAGVVLNKIN VSSFTRCLCS AGKYEKAFSV IREMIGQGFI PDTSTYSKVL NYLCNASKME
501: LAFLLFEEMK RGGLVADVYT YTIMVDSFCK AGLIEQARKW FNEMREVGCT PNVVTYTALI HAYLKAKKVS YANELFETML SEGCLPNIVT YSALIDGHCK
601: AGQVEKACQI FERMCGSKDV PDVDMYFKQY DDNSERPNVV TYGALLDGFC KSHRVEEARK LLDAMSMEGC EPNQIVYDAL IDGLCKVGKL DEAQEVKTEM
701: SEHGFPATLY TYSSLIDRYF KVKRQDLASK VLSKMLENSC APNVVIYTEM IDGLCKVGKT DEAYKLMQMM EEKGCQPNVV TYTAMIDGFG MIGKIETCLE
801: LLERMGSKGV APNYVTYRVL IDHCCKNGAL DVAHNLLEEM KQTHWPTHTA GYRKVIEGFN KEFIESLGLL DEIGQDDTAP FLSVYRLLID NLIKAQRLEM
901: ALRLLEEVAT FSATLVDYSS TYNSLIESLC LANKVETAFQ LFSEMTKKGV IPEMQSFCSL IKGLFRNSKI SEALLLLDFI SHMVCPL
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G06710]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.