Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g099740.1.1 | Tomato | nucleus | 80.07 | 88.2 |
| VIT_06s0009g03550.t01 | Wine grape | nucleus | 83.79 | 85.46 |
| KRH14571 | Soybean | nucleus | 82.46 | 84.1 |
| KRH73555 | Soybean | nucleus | 82.37 | 83.94 |
| KRG99075 | Soybean | nucleus | 81.05 | 82.73 |
| KRH45937 | Soybean | nucleus | 80.69 | 82.15 |
| AT5G12350.1 | Thale cress | nucleus | 76.08 | 79.91 |
| Bra008895.1-P | Field mustard | nucleus | 74.31 | 78.85 |
| CDX85690 | Canola | nucleus | 74.67 | 78.78 |
| CDX97187 | Canola | nucleus | 73.69 | 78.64 |
| CDX69686 | Canola | nucleus | 74.49 | 78.6 |
| CDX91165 | Canola | nucleus | 74.49 | 78.38 |
| Bra006504.1-P | Field mustard | cytosol | 76.0 | 77.79 |
| GSMUA_Achr5P08220_001 | Banana | cytosol | 75.55 | 77.55 |
| Zm00001d042074_P001 | Maize | cytosol | 73.96 | 76.54 |
| AT5G19420.2 | Thale cress | mitochondrion | 77.06 | 76.38 |
| Bra023374.1-P | Field mustard | nucleus | 74.76 | 75.9 |
| CDX92532 | Canola | nucleus | 74.76 | 75.76 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 76.08 | 75.68 |
| Os05t0384800-01 | Rice | cytosol | 72.72 | 75.6 |
| CDY13998 | Canola | nucleus | 74.58 | 75.45 |
| CDX70876 | Canola | cytosol | 74.49 | 75.43 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 26.31 | 75.38 |
| KXG34127 | Sorghum | cytosol | 61.56 | 75.38 |
| TraesCS1B01G252700.2 | Wheat | cytosol | 72.54 | 74.79 |
| GSMUA_Achr8P00080_001 | Banana | endoplasmic reticulum | 61.91 | 74.76 |
| TraesCS1D01G240700.1 | Wheat | cytosol | 72.36 | 74.75 |
| TraesCS1A01G240600.2 | Wheat | cytosol | 72.54 | 74.66 |
| Zm00001d011851_P001 | Maize | cytosol | 73.78 | 74.51 |
| Bra002235.1-P | Field mustard | nucleus | 73.16 | 74.15 |
| TraesCS3B01G543500.1 | Wheat | cytosol | 71.39 | 74.01 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 71.21 | 73.83 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 71.12 | 73.07 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 72.63 | 72.89 |
| Os01t0952300-00 | Rice | cytosol | 71.48 | 70.6 |
| Solyc05g007280.2.1 | Tomato | cytosol | 2.83 | 54.24 |
| Solyc05g007290.1.1 | Tomato | endoplasmic reticulum | 46.94 | 52.53 |
| Solyc03g116360.1.1 | Tomato | cytosol | 43.76 | 52.22 |
| Solyc04g071040.2.1 | Tomato | cytosol | 51.55 | 51.69 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 44.55 | 46.97 |
| Solyc02g036390.1.1 | Tomato | cytosol | 30.91 | 44.46 |
| Solyc05g018620.2.1 | Tomato | cytosol | 10.01 | 36.81 |
| Solyc05g006940.2.1 | Tomato | cytosol | 10.89 | 31.22 |
| Solyc05g056590.2.1 | Tomato | cytosol | 7.53 | 30.91 |
| Solyc02g085780.2.1 | Tomato | cytosol | 10.1 | 29.23 |
| Solyc07g042980.2.1 | Tomato | cytosol | 6.2 | 28.81 |
| Solyc07g042970.2.1 | Tomato | mitochondrion | 6.02 | 28.22 |
| Solyc07g063300.2.1 | Tomato | plasma membrane | 11.78 | 27.37 |
| Solyc05g014030.2.1 | Tomato | cytosol | 12.58 | 26.64 |
| Solyc02g089220.2.1 | Tomato | mitochondrion | 7.44 | 25.45 |
| Solyc02g081250.1.1 | Tomato | cytosol | 39.5 | 21.37 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 |
| InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | UniProt:K4D9C5 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16457 | PFAM:PF16627 |
| InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 |
| PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF301 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 |
| SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc11g065120.1 | EnsemblPlants:Solyc11g065120.1.1 | UniParc:UPI0002769810 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
No Description!
Coordinates
chr11:+:50452435..50472950
Molecular Weight (calculated)
122723.0 Da
IEP (calculated)
9.498
GRAVY (calculated)
-0.518
Length
1129 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRAEKTAPFL DSRASFGRTG FCISIADKMN SDANRAGGQV ERDIEQAITA LKKGAYLLKY GRRGKPKFCP FRLSNDESAL IWFSGKEEKH LKLSHVSRII
0101: SGQRTPIFQR YPRPEKEYQS FSLIYNDRSL DLICKDKDEA EVWFSGLKAL ISRGHQRKWR TESRSDGISS GATSPRTYTR RSSPLHSPFS SGDSLQKDGG
0201: DQLRLHSPYE SPPKNGLDKA FADVIMYAVP PKGFFPSDSA SASVHSISSG GSDSMHGQMK GIGMDNFRVS LSSAVSSSSQ GSGHDDGDAL GDVFIWGEGT
0301: GDGVLGGGPH RVSSSFGAKL DSLFPKALES AVVLDVQNIA CGGRHAALVT KQGEIFSWGE ESGGRLGHGI DSDVLHPKLI DSLSHSNIEL VACGENHTCA
0401: VTLSGDLYTW GDGDFGLLGH GNEVSHWVPK RVNGPLEGIH VSYISCGPWH TAVVTSAGQL FTFGDGTFGV LGHGDRKSVS KPREVESLKG LRTVRAACGV
0501: WHTAAVVEVM VGSSSSSNCS SGKLFTWGDG DKGRLGHGDK ESKLVPTCVA ALVEPNFCQV ACGHSLTVAL TTSGHLYTMG SPVYGQLGHH QADGKLPRRV
0601: EGKLAKSFVE EIACGAYHVA VLTSRTEVYT WGKGANGRLG HGDMDDRNSP TLVEALKDKQ VKSIACGTNF TAAICLHKWV SGVDQSMCSG CRLPFNFKRK
0701: RHNCYNCGLV FCHSCSSRKS LRASMAPNPN KPYRVCDNCF SKLKKAMETD ASSQSSMSRR GSMNQSLTDI TDKDTKLDTR SRPQLARFST MESFKHVETR
0801: SSKQKKKLEF NSSRVSPIPN GTSQWGALNI SKSFNPVFGS SKKFFSASVP GSRIVSRATS PISRRASPPR STTPTPTLGG LTSPKIVLGD AKRTNDGLSQ
0901: EVIKLRAQVE NLTRKAQLQE IELERTNKQL KEAIAIAGEE TAKCKAAKEV IKSLTSQLKE MAERLPVGAS RNIKSPTSLS SGSNLTASDI PNGCVDRVHS
1001: QLTFQDVEPN VSNSQLLSNG SSNVSNHNAV QNRQGFPEPT TRNGGRTKEG DSRNENEWVE QDEPGVYITL TSLPAGVKDL KRVRFSRKRF SEKQAEQWWA
1101: ENRARVYEQY NVRMGDKSSI GTVSEDLQH
0101: SGQRTPIFQR YPRPEKEYQS FSLIYNDRSL DLICKDKDEA EVWFSGLKAL ISRGHQRKWR TESRSDGISS GATSPRTYTR RSSPLHSPFS SGDSLQKDGG
0201: DQLRLHSPYE SPPKNGLDKA FADVIMYAVP PKGFFPSDSA SASVHSISSG GSDSMHGQMK GIGMDNFRVS LSSAVSSSSQ GSGHDDGDAL GDVFIWGEGT
0301: GDGVLGGGPH RVSSSFGAKL DSLFPKALES AVVLDVQNIA CGGRHAALVT KQGEIFSWGE ESGGRLGHGI DSDVLHPKLI DSLSHSNIEL VACGENHTCA
0401: VTLSGDLYTW GDGDFGLLGH GNEVSHWVPK RVNGPLEGIH VSYISCGPWH TAVVTSAGQL FTFGDGTFGV LGHGDRKSVS KPREVESLKG LRTVRAACGV
0501: WHTAAVVEVM VGSSSSSNCS SGKLFTWGDG DKGRLGHGDK ESKLVPTCVA ALVEPNFCQV ACGHSLTVAL TTSGHLYTMG SPVYGQLGHH QADGKLPRRV
0601: EGKLAKSFVE EIACGAYHVA VLTSRTEVYT WGKGANGRLG HGDMDDRNSP TLVEALKDKQ VKSIACGTNF TAAICLHKWV SGVDQSMCSG CRLPFNFKRK
0701: RHNCYNCGLV FCHSCSSRKS LRASMAPNPN KPYRVCDNCF SKLKKAMETD ASSQSSMSRR GSMNQSLTDI TDKDTKLDTR SRPQLARFST MESFKHVETR
0801: SSKQKKKLEF NSSRVSPIPN GTSQWGALNI SKSFNPVFGS SKKFFSASVP GSRIVSRATS PISRRASPPR STTPTPTLGG LTSPKIVLGD AKRTNDGLSQ
0901: EVIKLRAQVE NLTRKAQLQE IELERTNKQL KEAIAIAGEE TAKCKAAKEV IKSLTSQLKE MAERLPVGAS RNIKSPTSLS SGSNLTASDI PNGCVDRVHS
1001: QLTFQDVEPN VSNSQLLSNG SSNVSNHNAV QNRQGFPEPT TRNGGRTKEG DSRNENEWVE QDEPGVYITL TSLPAGVKDL KRVRFSRKRF SEKQAEQWWA
1101: ENRARVYEQY NVRMGDKSSI GTVSEDLQH
0001: MSRNGRMTPS DLSRAGPVTR DIEQAITALK KGAYLLKYGR RGKPKFCPFR LSNDESVLIW FSGKEEKHLK LSHVSRIISG QRTPIFQRYP RPEKEYQSFS
0101: LIYDERSLDL ICKDKDEAEV WFSGLKALIS RCHQRKWRTE SRSDGTPSEA NSPRTYTRRS SPLHSPFSSN ESFQKEGSNH LRLHSPYESP PKNGVDKAFS
0201: DMSLYAVPPK GFFPPGSATM SVHSLSSGGS DTLHGHMKGM GMDAFRVSLS SAISSSSHGS GHDDGDTLGD VFMWGEGIGE GVLGGGNHRV GSSLEIKMDS
0301: LLPKALESTI VLDVQNIACG GQHAVLVTKQ GESFSWGEES EGRLGHGVDS NVQHPKLIDA LNTTNIELVA CGEYHSCAVT LSGDLYTWGK GDFGILGHGN
0401: EVSHWVPKRV NFLMEGIHVS SIACGPYHTA VVTSAGQLFT FGDGTFGVLG HGDRKSVFIP REVDSLKGLR TVRAACGVWH TAAVVEVMVG SSSSSNCSSG
0501: KLFTWGDGDK SRLGHGDKEP KLVPTCVAAL VEPNFCQVAC GHSLTVALTT SGHVYTMGSP VYGQLGNPHA DGKVPTRVDG KLHKSFVEEI ACGAYHVAVL
0601: TSRTEVYTWG KGSNGRLGHG DADDRNSPTL VESLKDKQVK SIACGSNFTA AVCLHKWASG MDQSMCSGCR QPFNFKRKRH NCYNCGLVFC HSCSNKKSLK
0701: ACMAPNPNKP YRVCDRCFNK LKKAMETDPS SHSSLSRRES VNQGSDAIDR DEKLDTRSDG QLARFSLLEP MRQVDSRSKK NKKYEFNSSR VSPIPSGGSH
0801: RGSLNITKSF NPTFGSSKKF FSASVPGSRI ASRATSPISR RPSPPRSTTP TPTLSGLTTP KIVVDDTKRS NDNLSQEVVM LRSQVENLTR KAQLQEVELE
0901: RTTKQLKEAL AIASEESARC KAAKEVIKSL TAQLKDMAER LPVGSARTVK SPSLNSFGSS PDYAAPSSNT LNRPNSRETD SDSLTTVPMF SNGTSTPVFD
1001: SGSYRQQANH AAEAINRIST RSKESEPRNE NEWVEQDEPG VYITLTALAG GARDLKRVRF SRKRFSEKQA EEWWAENRGR VYEQYNVRIV VDKSSVGVGS
1101: EDLGH
0101: LIYDERSLDL ICKDKDEAEV WFSGLKALIS RCHQRKWRTE SRSDGTPSEA NSPRTYTRRS SPLHSPFSSN ESFQKEGSNH LRLHSPYESP PKNGVDKAFS
0201: DMSLYAVPPK GFFPPGSATM SVHSLSSGGS DTLHGHMKGM GMDAFRVSLS SAISSSSHGS GHDDGDTLGD VFMWGEGIGE GVLGGGNHRV GSSLEIKMDS
0301: LLPKALESTI VLDVQNIACG GQHAVLVTKQ GESFSWGEES EGRLGHGVDS NVQHPKLIDA LNTTNIELVA CGEYHSCAVT LSGDLYTWGK GDFGILGHGN
0401: EVSHWVPKRV NFLMEGIHVS SIACGPYHTA VVTSAGQLFT FGDGTFGVLG HGDRKSVFIP REVDSLKGLR TVRAACGVWH TAAVVEVMVG SSSSSNCSSG
0501: KLFTWGDGDK SRLGHGDKEP KLVPTCVAAL VEPNFCQVAC GHSLTVALTT SGHVYTMGSP VYGQLGNPHA DGKVPTRVDG KLHKSFVEEI ACGAYHVAVL
0601: TSRTEVYTWG KGSNGRLGHG DADDRNSPTL VESLKDKQVK SIACGSNFTA AVCLHKWASG MDQSMCSGCR QPFNFKRKRH NCYNCGLVFC HSCSNKKSLK
0701: ACMAPNPNKP YRVCDRCFNK LKKAMETDPS SHSSLSRRES VNQGSDAIDR DEKLDTRSDG QLARFSLLEP MRQVDSRSKK NKKYEFNSSR VSPIPSGGSH
0801: RGSLNITKSF NPTFGSSKKF FSASVPGSRI ASRATSPISR RPSPPRSTTP TPTLSGLTTP KIVVDDTKRS NDNLSQEVVM LRSQVENLTR KAQLQEVELE
0901: RTTKQLKEAL AIASEESARC KAAKEVIKSL TAQLKDMAER LPVGSARTVK SPSLNSFGSS PDYAAPSSNT LNRPNSRETD SDSLTTVPMF SNGTSTPVFD
1001: SGSYRQQANH AAEAINRIST RSKESEPRNE NEWVEQDEPG VYITLTALAG GARDLKRVRF SRKRFSEKQA EEWWAENRGR VYEQYNVRIV VDKSSVGVGS
1101: EDLGH
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K148]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.