Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G241800.1 | Wheat | cytosol | 96.17 | 82.75 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 96.17 | 82.29 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 92.11 | 78.82 |
| Zm00001d017641_P004 | Maize | cytosol | 59.58 | 63.18 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 71.74 | 61.04 |
| Zm00001d051479_P005 | Maize | nucleus | 69.33 | 58.83 |
| TraesCS2A01G456700.1 | Wheat | cytosol, nucleus, peroxisome | 63.64 | 55.23 |
| CDX87986 | Canola | cytosol | 10.73 | 47.57 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 45.89 | 46.92 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 47.54 | 44.74 |
| Solyc02g036390.1.1 | Tomato | cytosol | 38.44 | 44.71 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 41.73 | 37.91 |
| PGSC0003DMT400043094 | Potato | nucleus | 44.25 | 37.55 |
| AT1G65920.1 | Thale cress | cytosol | 41.29 | 37.48 |
| CDY31624 | Canola | cytosol | 39.76 | 36.93 |
| KRG98005 | Soybean | cytosol | 43.15 | 36.82 |
| KRH30884 | Soybean | cytosol | 42.94 | 36.5 |
| Bra038181.1-P | Field mustard | cytosol | 39.98 | 36.43 |
| CDX87989 | Canola | cytosol | 39.43 | 35.93 |
| TraesCS1A01G240600.2 | Wheat | cytosol | 39.32 | 32.73 |
| TraesCS7A01G185400.1 | Wheat | cytosol | 34.72 | 31.32 |
| TraesCS2A01G581400.1 | Wheat | cytosol | 35.6 | 30.37 |
| TraesCS3A01G512900.1 | Wheat | cytosol | 30.23 | 30.3 |
| TraesCS1A01G366800.1 | Wheat | cytosol | 34.39 | 30.08 |
| TraesCS1A01G020400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 29.68 | 29.88 |
| TraesCS2A01G306400.3 | Wheat | cytosol | 13.58 | 27.99 |
| TraesCS1A01G076400.1 | Wheat | mitochondrion | 11.72 | 25.54 |
| TraesCS6A01G153100.1 | Wheat | golgi | 13.14 | 25.53 |
| TraesCS5A01G364400.2 | Wheat | mitochondrion | 11.72 | 24.43 |
| TraesCS2A01G236300.4 | Wheat | cytosol | 12.81 | 23.83 |
| TraesCS7A01G284800.1 | Wheat | cytosol | 10.08 | 23.06 |
| TraesCS3A01G319000.1 | Wheat | cytosol | 10.3 | 22.93 |
| TraesCS5A01G173400.1 | Wheat | cytosol | 11.61 | 22.13 |
| Solyc02g081250.1.1 | Tomato | cytosol | 44.36 | 19.41 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 |
| InterPro:IPR013083 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF16457 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PANTHER:PTHR22870 |
| PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 |
| SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS6A01G261000 | EnsemblPlants:TraesCS6A01G261000.1 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | TIGR:cd13365 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:+:484561070..484566010
Molecular Weight (calculated)
100051.0 Da
IEP (calculated)
8.619
GRAVY (calculated)
-0.310
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGELEGRSS GTRGAEQAIV AVKKGAHLLK CGKRGKPRFC PFRLSCDEKL LIWYSKEREK SLSLSSVSSV VLGQKTTNLL RLHWPEKEHH SLSVIYKNGE
101: CSLDLICKDK DQADCWHLGL TALVSALYSP LLLVDSTSSR RINSCANSPP SYIQQRNRLF SVHDTRKFSQ VHSLYGSPRL IQNKVSKSSL DCPEAFVSPR
201: ERTWSDVDFY LERITPEMVN RVKNSFMDIP VAAKIQEGIT QMPKLKASEG SHMACGIDSL KDIFAWGEIP GSVLENGDAP KDNVSLPRLL KPTQILDVQN
301: VACGEKHAAI VTKQGEVFSW GKESGGILGH KMSVSVSEPT IIESLTSIPM KAIAFGAKHT CALAISGELY EWGEGTHSLG LWDDQCQRSQ WFPHKLFDPL
401: DGVSVLKIAC GQWHTAIISS SGQLFTYGDG TFGVLGHGNT MSVARPKEVE SLKGLRTKAV ACGPWHTAAI VEILGTVKSN APSGKLFTWG DADKGKLGHA
501: DQKSKLVPTC VEPLTDSDFA QVSCAKALTV ALTITGVVFT IGSMEHGQLG NRRLSDTSIC SVEGPLKTEF VRDISSGSSH VAVLTMNGKV YTWGKGTEGQ
601: LGLGDYTDRS SPTLVESLED KQVDSIACGS NFTIAVCLHR SISGKDQSVC SSCQLSFTFT RKKHNCYNCG SMFCNSCSSN KVSRAALGPD RSKRYRVCDV
701: CFTQLQKIEG HGTLSSQSAI QKEEAFPTEI RPYTPKLSRI FKEANSIMEK MTTAQGSNQR NQDLAAPVQL KTRRWGQVEC PSQFKCARNN IPCCSIPNKQ
801: TVDVSLTQRM PEPVPPKGTG SMPEAATNLK AELDSTENIL LGEVKQLQAQ VTTLAEQCRR RSLKVQMYKR KVEETWLIIL NEAANCKAAK EIIKVLTNQR
901: NTLSKKIDLA DGQ
101: CSLDLICKDK DQADCWHLGL TALVSALYSP LLLVDSTSSR RINSCANSPP SYIQQRNRLF SVHDTRKFSQ VHSLYGSPRL IQNKVSKSSL DCPEAFVSPR
201: ERTWSDVDFY LERITPEMVN RVKNSFMDIP VAAKIQEGIT QMPKLKASEG SHMACGIDSL KDIFAWGEIP GSVLENGDAP KDNVSLPRLL KPTQILDVQN
301: VACGEKHAAI VTKQGEVFSW GKESGGILGH KMSVSVSEPT IIESLTSIPM KAIAFGAKHT CALAISGELY EWGEGTHSLG LWDDQCQRSQ WFPHKLFDPL
401: DGVSVLKIAC GQWHTAIISS SGQLFTYGDG TFGVLGHGNT MSVARPKEVE SLKGLRTKAV ACGPWHTAAI VEILGTVKSN APSGKLFTWG DADKGKLGHA
501: DQKSKLVPTC VEPLTDSDFA QVSCAKALTV ALTITGVVFT IGSMEHGQLG NRRLSDTSIC SVEGPLKTEF VRDISSGSSH VAVLTMNGKV YTWGKGTEGQ
601: LGLGDYTDRS SPTLVESLED KQVDSIACGS NFTIAVCLHR SISGKDQSVC SSCQLSFTFT RKKHNCYNCG SMFCNSCSSN KVSRAALGPD RSKRYRVCDV
701: CFTQLQKIEG HGTLSSQSAI QKEEAFPTEI RPYTPKLSRI FKEANSIMEK MTTAQGSNQR NQDLAAPVQL KTRRWGQVEC PSQFKCARNN IPCCSIPNKQ
801: TVDVSLTQRM PEPVPPKGTG SMPEAATNLK AELDSTENIL LGEVKQLQAQ VTTLAEQCRR RSLKVQMYKR KVEETWLIIL NEAANCKAAK EIIKVLTNQR
901: NTLSKKIDLA DGQ
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.