Factsheet for TraesCS3A01G319000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G347100.2	Wheat	cytosol	93.9	94.59
TraesCS3D01G312300.1	Wheat	cytosol	92.93	93.61
HORVU3Hr1G076310.2	Barley	cytosol, mitochondrion, nucleus	89.76	81.06
Os01t0777800-01	Rice	cytosol	77.07	78.8
OQU87663	Sorghum	cytosol	74.15	75.25
Zm00001d043280_P001	Maize	cytosol	73.66	74.02
GSMUA_Achr6P29750_001	Banana	cytosol	53.41	55.16
Solyc05g006940.2.1	Tomato	cytosol	48.29	50.25
PGSC0003DMT400045467	Potato	cytosol	48.29	49.87
VIT_01s0026g01520.t01	Wine grape	cytosol	47.8	49.49
CDY46423	Canola	cytosol	45.61	49.34
CDY16215	Canola	cytosol	45.85	48.7
Bra016304.1-P	Field mustard	cytosol	43.66	48.51
CDY69131	Canola	cytosol	37.8	48.29
AT1G27060.1	Thale cress	cytosol	45.37	48.19
Bra024664.1-P	Field mustard	cytosol	41.22	47.08
KRH74759	Soybean	nucleus	44.88	32.68
KRH69375	Soybean	nucleus	45.37	31.47
CDY14709	Canola	nucleus	45.85	27.21
TraesCS1A01G076400.1	Wheat	mitochondrion	26.1	25.54
TraesCS7A01G284800.1	Wheat	cytosol	24.15	24.81
TraesCS2A01G306400.3	Wheat	cytosol	21.71	20.09
TraesCS2A01G236300.4	Wheat	cytosol	23.66	19.76
TraesCS6A01G153100.1	Wheat	golgi	21.95	19.15
TraesCS5A01G364400.2	Wheat	mitochondrion	20.24	18.95
TraesCS5A01G173400.1	Wheat	cytosol	20.73	17.75
TraesCS3A01G512900.1	Wheat	cytosol	24.63	11.09
TraesCS1A01G020400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	24.15	10.92
TraesCS6A01G261000.1	Wheat	cytosol	22.93	10.3
TraesCS1A01G366800.1	Wheat	cytosol	25.85	10.15
TraesCS7A01G185400.1	Wheat	cytosol	24.63	9.98
TraesCS2A01G581400.1	Wheat	cytosol	25.85	9.91
TraesCS1A01G240600.2	Wheat	cytosol	26.1	9.75
TraesCS2A01G456700.1	Wheat	cytosol, nucleus, peroxisome	23.9	9.32

Protein Annotations

EnsemblPlants:TraesCS3A01G319000.1	EnsemblPlantsGene:TraesCS3A01G319000	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PFAM:PF00415	PFscan:PS50012	PRINTS:PR00633	ScanProsite:PS00626	SEG:seg
SUPFAM:SSF50985	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:561059079..561062958

Molecular Weight (calculated)

43626.9 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.271

Length

410 amino acids

Sequence
(BLAST)

001: MTSLPQGGME KTAAAVAVAA EEEPEEAWAW TWGAGTDGQL GNGGFQDYHL PQPLLLPPRC RGRVSFVAGG GAHAIALTSD GEVFTWGRGT HGQLGHGNIE
101: NIPHPKSVKF FENYTVTCVS TGWNHSGFAT DSGQLFMCGD GSFGQLGTGD TQSRNLPFEV PSFTTKHVEK LAFGMRHSLV LLKDNSVYGF GSARRGQVGK
201: SASKNQKFCN TPRLIDGFPN CKIVNLYANG DHSAALDESG QLYIWGRALV GEHDDDQPRA AFPSLSISQV ALGWHHALVL SGGELYTIGA YRHQKCDPSV
301: SENAVAQKLN LTTTSSKHHE SFSVSNLAKV PSIHGQQVTQ IAAGTEHSAL VTDSGALFTW GWGEHGQLGL GDTCDQVVPR RVNLGDEGSR SSASLSVYCG
401: SGFTVAVSLP

Best Arabidopsis Sequence Match ( AT1G27060.1 )
(BLAST)

001: MAEHGETQAD EEEEEQVWSW GAGTDGQLGT TKLQDELLPQ LLSLTSLPSI SMLACGGAHV IALTSGGKVF TWGRGSSGQL GHGDILNITL PKLVSFFDDS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS

Arabidopsis Description

At1g27060 [Source:UniProtKB/TrEMBL;Acc:A2RVN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.