Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46423 | Canola | cytosol | 92.83 | 78.63 |
| CDY16215 | Canola | cytosol | 84.11 | 69.95 |
| AT1G27060.1 | Thale cress | cytosol | 79.75 | 66.32 |
| VIT_01s0026g01520.t01 | Wine grape | cytosol | 59.81 | 48.48 |
| PGSC0003DMT400045467 | Potato | cytosol | 57.32 | 46.35 |
| Solyc05g006940.2.1 | Tomato | cytosol | 56.7 | 46.19 |
| GSMUA_Achr6P29750_001 | Banana | cytosol | 51.4 | 41.56 |
| CDY14709 | Canola | nucleus | 84.42 | 39.22 |
| Os01t0777800-01 | Rice | cytosol | 48.6 | 38.9 |
| TraesCS3B01G347100.2 | Wheat | cytosol | 48.91 | 38.57 |
| TraesCS3D01G312300.1 | Wheat | cytosol | 48.6 | 38.33 |
| OQU87663 | Sorghum | cytosol | 47.98 | 38.12 |
| Zm00001d043280_P001 | Maize | cytosol | 48.29 | 37.99 |
| TraesCS3A01G319000.1 | Wheat | cytosol | 48.29 | 37.8 |
| KRH74759 | Soybean | nucleus | 61.68 | 35.17 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 48.29 | 34.14 |
| KRH69375 | Soybean | nucleus | 62.62 | 34.01 |
| CDY26488 | Canola | cytosol | 25.86 | 20.85 |
| CDX69479 | Canola | cytosol | 25.55 | 20.65 |
| CDY40735 | Canola | mitochondrion | 28.04 | 20.59 |
| CDY44785 | Canola | mitochondrion | 27.73 | 20.55 |
| CDY43762 | Canola | cytosol | 27.1 | 20.33 |
| CDY34733 | Canola | cytosol | 21.18 | 20.3 |
| CDX84451 | Canola | cytosol | 27.1 | 19.51 |
| CDY60046 | Canola | cytosol | 26.79 | 19.2 |
| CDX81201 | Canola | cytosol | 25.86 | 18.86 |
| CDY31347 | Canola | cytosol | 25.23 | 18.58 |
| CDY39843 | Canola | cytosol | 23.05 | 18.32 |
| CDY57523 | Canola | cytosol | 24.92 | 16.99 |
| CDY43240 | Canola | cytosol | 24.92 | 16.95 |
| CDX97668 | Canola | cytosol | 24.92 | 16.77 |
| CDY56827 | Canola | cytosol | 24.61 | 16.56 |
| CDY02190 | Canola | mitochondrion | 21.81 | 15.8 |
| CDY51633 | Canola | mitochondrion | 21.81 | 15.77 |
| CDY04192 | Canola | cytosol | 23.36 | 15.24 |
| CDY39172 | Canola | cytosol | 23.36 | 15.24 |
| CDY13609 | Canola | cytosol | 23.05 | 13.99 |
| CDY28863 | Canola | cytosol | 22.43 | 13.85 |
| CDX99731 | Canola | cytosol, plastid | 23.05 | 13.83 |
| CDX83586 | Canola | cytosol, plastid | 22.74 | 13.8 |
| CDY01845 | Canola | plastid | 22.12 | 13.73 |
| CDX96062 | Canola | plastid | 21.81 | 13.51 |
| CDY40988 | Canola | cytosol, plastid | 23.05 | 13.48 |
| CDY56518 | Canola | cytosol, plastid | 21.81 | 13.46 |
| CDY66504 | Canola | cytosol | 33.96 | 13.21 |
| CDY70949 | Canola | cytosol | 12.15 | 11.02 |
| CDX97187 | Canola | nucleus | 35.51 | 10.78 |
| CDX69686 | Canola | nucleus | 35.2 | 10.56 |
| CDX85690 | Canola | nucleus | 34.89 | 10.47 |
| CDX91165 | Canola | nucleus | 34.58 | 10.34 |
| CDX85076 | Canola | cytosol | 33.33 | 10.31 |
| CDY20113 | Canola | endoplasmic reticulum, extracellular | 26.17 | 10.18 |
| CDY12764 | Canola | cytosol | 33.02 | 10.11 |
| CDY21840 | Canola | endoplasmic reticulum, extracellular | 25.86 | 10.05 |
| CDX92532 | Canola | nucleus | 34.58 | 9.96 |
| CDY28580 | Canola | plasma membrane | 32.4 | 9.96 |
| CDY44086 | Canola | plasma membrane, vacuole | 32.4 | 9.89 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 34.89 | 9.87 |
| CDY13998 | Canola | nucleus | 34.27 | 9.86 |
| CDX77534 | Canola | cytosol | 33.33 | 9.63 |
| CDX77871 | Canola | cytosol | 28.35 | 9.59 |
| CDY49416 | Canola | cytosol | 33.33 | 9.56 |
| CDY21795 | Canola | cytosol | 28.35 | 9.51 |
| CDX70876 | Canola | cytosol | 33.02 | 9.51 |
| CDY48550 | Canola | cytosol | 28.97 | 9.49 |
| CDX88324 | Canola | cytosol | 31.15 | 9.43 |
| CDX87557 | Canola | cytosol | 31.46 | 9.41 |
| CDY31624 | Canola | cytosol | 28.35 | 9.26 |
| CDX87989 | Canola | cytosol | 28.35 | 9.08 |
| CDY47138 | Canola | cytosol | 28.66 | 8.79 |
| CDY11586 | Canola | cytosol | 28.66 | 8.74 |
| CDX87986 | Canola | cytosol | 3.12 | 4.85 |
| CDX68076 | Canola | cytosol | 10.28 | 3.98 |
Protein Annotations
| EnsemblPlants:CDY69131 | EnsemblPlantsGene:GSBRNA2T00083467001 | Gene3D:2.130.10.30 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | PFAM:PF00415 | PFscan:PS50012 | PRINTS:PR00633 | ProteinID:CDY69131 | ProteinID:CDY69131.1 |
| ScanProsite:PS00626 | SEG:seg | SUPFAM:SSF50985 | UniParc:UPI0004EE4411 | UniProt:A0A078JU40 | MapMan:35.1 |
Description
BnaCnng62040DBnaCnng62040D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JU40]
Coordinates
chrLK038717:-:102..1537
Molecular Weight (calculated)
33656.4 Da
IEP (calculated)
4.848
GRAVY (calculated)
-0.079
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MSELNEAPSP ADEEEVWSWG AGTDGQLGTS KLQDEHLPQL LSLTSLPSIS MLACGGAHVI ALTSGGKVFT WGRGNSGQLG HGDNLNTSLP KPLSFFDDDY
101: FISQASAGWS HSAFVSDSGC LFTCGNGSFG QLGHGDNISL TSPAKVSYFV DKSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGVSSDR TKSVNLPCVV
201: SGLEGVEVVR VAASGDHSAA ISANGELFTW GRGFCGSPDV QTPQCLPSSQ SFREVALGWN HALLLTFDGK VLKLGNTLDK QNEKQQLQED SSETLLEKVI
301: GFDGVEVLQI AAGAEHSAAV T
101: FISQASAGWS HSAFVSDSGC LFTCGNGSFG QLGHGDNISL TSPAKVSYFV DKSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGVSSDR TKSVNLPCVV
201: SGLEGVEVVR VAASGDHSAA ISANGELFTW GRGFCGSPDV QTPQCLPSSQ SFREVALGWN HALLLTFDGK VLKLGNTLDK QNEKQQLQED SSETLLEKVI
301: GFDGVEVLQI AAGAEHSAAV T
001: MAEHGETQAD EEEEEQVWSW GAGTDGQLGT TKLQDELLPQ LLSLTSLPSI SMLACGGAHV IALTSGGKVF TWGRGSSGQL GHGDILNITL PKLVSFFDDS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS
Arabidopsis Description
At1g27060 [Source:UniProtKB/TrEMBL;Acc:A2RVN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.