Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16215 | Canola | cytosol | 51.52 | 92.23 |
| CDY69131 | Canola | cytosol | 39.22 | 84.42 |
| CDY46423 | Canola | cytosol | 45.73 | 83.38 |
| AT1G27060.1 | Thale cress | cytosol | 45.15 | 80.83 |
| VIT_01s0026g01520.t01 | Wine grape | cytosol | 33.29 | 58.08 |
| PGSC0003DMT400045467 | Potato | cytosol | 30.97 | 53.9 |
| Solyc05g006940.2.1 | Tomato | cytosol | 30.68 | 53.81 |
| GSMUA_Achr6P29750_001 | Banana | cytosol | 28.8 | 50.13 |
| TraesCS3D01G312300.1 | Wheat | cytosol | 27.64 | 46.93 |
| Os01t0777800-01 | Rice | cytosol | 27.21 | 46.88 |
| TraesCS3B01G347100.2 | Wheat | cytosol | 27.35 | 46.44 |
| KRH74759 | Soybean | nucleus | 37.77 | 46.36 |
| KRH69375 | Soybean | nucleus | 39.51 | 46.19 |
| TraesCS3A01G319000.1 | Wheat | cytosol | 27.21 | 45.85 |
| OQU87663 | Sorghum | cytosol | 26.77 | 45.79 |
| Zm00001d043280_P001 | Maize | cytosol | 26.92 | 45.59 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 28.36 | 43.17 |
| CDX69479 | Canola | cytosol | 14.33 | 24.94 |
| CDY26488 | Canola | cytosol | 14.33 | 24.87 |
| CDY34733 | Canola | cytosol | 12.01 | 24.78 |
| CDY40735 | Canola | mitochondrion | 14.91 | 23.57 |
| CDY44785 | Canola | mitochondrion | 14.76 | 23.56 |
| CDY43762 | Canola | cytosol | 14.18 | 22.9 |
| CDX84451 | Canola | cytosol | 14.18 | 21.97 |
| CDY60046 | Canola | cytosol | 14.18 | 21.88 |
| CDX81201 | Canola | cytosol | 13.75 | 21.59 |
| CDY39843 | Canola | cytosol | 12.59 | 21.53 |
| CDY31347 | Canola | cytosol | 13.46 | 21.33 |
| CDY02190 | Canola | mitochondrion | 11.87 | 18.51 |
| CDY51633 | Canola | mitochondrion | 11.87 | 18.47 |
| CDX97668 | Canola | cytosol | 12.74 | 18.45 |
| CDY57523 | Canola | cytosol | 12.45 | 18.26 |
| CDY56827 | Canola | cytosol | 12.59 | 18.24 |
| CDY43240 | Canola | cytosol | 12.45 | 18.22 |
| CDY04192 | Canola | cytosol | 12.3 | 17.28 |
| CDY39172 | Canola | cytosol | 12.3 | 17.28 |
| CDY28863 | Canola | cytosol | 12.74 | 16.92 |
| CDY56518 | Canola | cytosol, plastid | 12.45 | 16.54 |
| CDY01845 | Canola | plastid | 12.3 | 16.44 |
| CDX96062 | Canola | plastid | 12.3 | 16.41 |
| CDX83586 | Canola | cytosol, plastid | 12.3 | 16.07 |
| CDY13609 | Canola | cytosol | 12.3 | 16.07 |
| CDX99731 | Canola | cytosol, plastid | 12.3 | 15.89 |
| CDY66504 | Canola | cytosol | 18.67 | 15.64 |
| CDY40988 | Canola | cytosol, plastid | 11.87 | 14.94 |
| CDX87986 | Canola | cytosol | 3.91 | 13.11 |
| CDX97187 | Canola | nucleus | 19.68 | 12.85 |
| CDX69686 | Canola | nucleus | 19.54 | 12.62 |
| CDX85690 | Canola | nucleus | 19.39 | 12.52 |
| CDY70949 | Canola | cytosol | 6.37 | 12.43 |
| CDX91165 | Canola | nucleus | 19.25 | 12.4 |
| CDX85076 | Canola | cytosol | 18.38 | 12.24 |
| CDX77871 | Canola | cytosol | 16.79 | 12.22 |
| CDY21795 | Canola | cytosol | 16.79 | 12.12 |
| CDY12764 | Canola | cytosol | 18.38 | 12.12 |
| CDX92532 | Canola | nucleus | 19.39 | 12.03 |
| CDY44086 | Canola | plasma membrane, vacuole | 18.23 | 11.98 |
| CDY28580 | Canola | plasma membrane | 18.09 | 11.97 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 19.54 | 11.89 |
| CDY20113 | Canola | endoplasmic reticulum, extracellular | 14.18 | 11.88 |
| CDY13998 | Canola | nucleus | 19.1 | 11.83 |
| CDY21840 | Canola | endoplasmic reticulum, extracellular | 14.04 | 11.74 |
| CDY48550 | Canola | cytosol | 16.64 | 11.73 |
| CDX88324 | Canola | cytosol | 17.8 | 11.59 |
| CDX70876 | Canola | cytosol | 18.67 | 11.57 |
| CDX87557 | Canola | cytosol | 17.95 | 11.56 |
| CDX77534 | Canola | cytosol | 18.38 | 11.43 |
| CDY49416 | Canola | cytosol | 18.38 | 11.35 |
| CDY31624 | Canola | cytosol | 15.92 | 11.19 |
| CDY11586 | Canola | cytosol | 16.79 | 11.02 |
| CDY47138 | Canola | cytosol | 16.5 | 10.89 |
| CDX87989 | Canola | cytosol | 15.77 | 10.88 |
| CDX68076 | Canola | cytosol | 8.83 | 7.35 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | Gene3D:2.130.10.30 | GO:A0A078FP78 | UniProt:A0A078FP78 | EnsemblPlants:CDY14709 |
| ProteinID:CDY14709 | ProteinID:CDY14709.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00084516001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR000408 |
| InterPro:IPR001356 | InterPro:IPR009091 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF00415 | PFAM:PF02183 |
| PFAM:PF13540 | PRINTS:PR00633 | ScanProsite:PS00027 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50071 |
| InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF50985 | UniParc:UPI0004EDC77C |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g19660DBnaC05g19660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP78]
Coordinates
chrLK032046:-:458924..462870
Molecular Weight (calculated)
76169.1 Da
IEP (calculated)
5.334
GRAVY (calculated)
-0.363
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSNIDSEV WFQNQNQNHC LKFHSSCFPP TSQSALYGSS SMSNTEINTV DEDDVCESYK MRETTKKRKL TPIQLCLLEE SFEEDKRLEP DRKLWLAEKL
101: GLQPTQVAVW FQNRRARFKT RQLELDCDSL KASYAKLKTD RDILVRQNQA LENKVALLKE ELKIQEKLET QSMEAEKLGE EGSSMKSDNT QYTEEEEEEE
201: EEGLGSNQYS FPELAALGFY YDPTLSASNL GLVHIEAKKT LNIFMVGNKN LINKILIFLQ VKRTLCYSHG VKVLRPFIEL DRQYHIFQWL ENPKVTVLSI
301: RDGRVMAEHG GITPAPADEE EQVWSWGAGT DGQLGTAKLQ DEHLPQLLWL TSLASISMLA CGGAHVIALT SGGKVLTWGR GNSGQLGHGD MLDSSLPKPV
401: SFFDDYVVTQ ASAGWSHSGF VSDSGCLFTC GNGSFGQLGH GDNMSLCSPA KVSYFADKSV KMVACGMRHS LVLFAGNQVC GFGSGKRGQL GFSSDKTKTL
501: INLPCLVSGL EDVEIVRIAA NGDHSAAITA NGQMFSWGRG FCGSPDVQAP QCLPSSQFFR EVALGWSHAL LLTVDGEVFK LGNTLNKQSE KQQLQVDPSE
601: PFLEKVPGFD GVKVMQIAAG AEHSAALTEN GEVQTCGWGE HGQLGVGNTN DQNNPQLVSL GSIDQRTRDT KVYCGSGFTY VVRRIQKLSS S
101: GLQPTQVAVW FQNRRARFKT RQLELDCDSL KASYAKLKTD RDILVRQNQA LENKVALLKE ELKIQEKLET QSMEAEKLGE EGSSMKSDNT QYTEEEEEEE
201: EEGLGSNQYS FPELAALGFY YDPTLSASNL GLVHIEAKKT LNIFMVGNKN LINKILIFLQ VKRTLCYSHG VKVLRPFIEL DRQYHIFQWL ENPKVTVLSI
301: RDGRVMAEHG GITPAPADEE EQVWSWGAGT DGQLGTAKLQ DEHLPQLLWL TSLASISMLA CGGAHVIALT SGGKVLTWGR GNSGQLGHGD MLDSSLPKPV
401: SFFDDYVVTQ ASAGWSHSGF VSDSGCLFTC GNGSFGQLGH GDNMSLCSPA KVSYFADKSV KMVACGMRHS LVLFAGNQVC GFGSGKRGQL GFSSDKTKTL
501: INLPCLVSGL EDVEIVRIAA NGDHSAAITA NGQMFSWGRG FCGSPDVQAP QCLPSSQFFR EVALGWSHAL LLTVDGEVFK LGNTLNKQSE KQQLQVDPSE
601: PFLEKVPGFD GVKVMQIAAG AEHSAALTEN GEVQTCGWGE HGQLGVGNTN DQNNPQLVSL GSIDQRTRDT KVYCGSGFTY VVRRIQKLSS S
001: MAEHGETQAD EEEEEQVWSW GAGTDGQLGT TKLQDELLPQ LLSLTSLPSI SMLACGGAHV IALTSGGKVF TWGRGSSGQL GHGDILNITL PKLVSFFDDS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS
Arabidopsis Description
At1g27060 [Source:UniProtKB/TrEMBL;Acc:A2RVN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.