CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70949	Canola	cytosol	39.64	92.94
Bra003698.1-P	Field mustard	mitochondrion	97.35	75.02
CDY48550	Canola	cytosol	85.9	72.76
AT1G76950.1	Thale cress	cytosol	92.53	69.63
CDX88324	Canola	cytosol	87.47	68.43
CDX87557	Canola	cytosol	88.19	68.22
KRH30227	Soybean	cytosol	30.24	55.65
VIT_18s0166g00210.t01	Wine grape	cytosol	70.36	51.73
KRH70333	Soybean	cytosol	69.28	51.34
PGSC0003DMT400002081	Potato	cytosol	69.52	51.24
Solyc04g071040.2.1	Tomato	cytosol	69.16	50.98
KRH35179	Soybean	cytosol	68.31	50.62
KRG91629	Soybean	cytosol	66.75	50.46
CDY47138	Canola	cytosol	62.65	49.67
CDY11586	Canola	cytosol	62.89	49.57
KRH08736	Soybean	endoplasmic reticulum	39.28	46.77
KRH08750	Soybean	cytosol	35.54	46.31
GSMUA_Achr2P20470_001	Banana	endoplasmic reticulum, plasma membrane	53.49	44.98
GSMUA_Achr8P07850_001	Banana	cytosol	55.66	41.81
Zm00001d006773_P001	Maize	cytosol	20.12	41.44
EES13137	Sorghum	cytosol	51.57	40.23
TraesCS1A01G020400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	43.86	40.13
GSMUA_Achr6P13030_001	Banana	endoplasmic reticulum	47.23	40.04
HORVU1Hr1G002740.1	Barley	cytosol, mitochondrion, nucleus, plastid	43.61	39.91
Os04t0686200-01	Rice	plasma membrane	50.6	39.74
TraesCS1D01G019900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	43.49	39.71
TraesCS1B01G024400.1	Wheat	cytosol, mitochondrion, nucleus	43.37	39.69
KXG34192	Sorghum	cytosol	43.25	39.36
Zm00001d011805_P001	Maize	cytosol	43.01	39.14
CDX87986	Canola	cytosol	9.64	38.84
CDY66504	Canola	cytosol	38.55	38.79
HORVU3Hr1G112690.2	Barley	cytosol, plastid	42.17	38.55
TraesCS2A01G581400.1	Wheat	cytosol	49.64	38.5
TraesCS2B01G609200.1	Wheat	cytosol	49.64	38.5
EES18851	Sorghum	cytosol, plastid	42.41	38.43
GSMUA_AchrUn_...	Banana	nucleus	53.37	38.42
TraesCS2D01G589800.1	Wheat	cytosol	49.52	38.41
Zm00001d035723_P001	Maize	cytosol, mitochondrion, nucleus, plastid	42.41	38.39
Zm00001d002876_P001	Maize	mitochondrion	50.24	38.36
HORVU2Hr1G124270.22	Barley	cytosol, mitochondrion, nucleus	49.64	38.29
TraesCS3A01G512900.1	Wheat	cytosol	41.93	38.2
Os05t0106700-00	Rice	mitochondrion	43.25	38.19
TraesCS3B01G581600.2	Wheat	cytosol	41.33	37.61
KRH30228	Soybean	cytosol	18.31	37.35
TraesCS3D01G522600.2	Wheat	cytosol	38.55	36.82
CDX85076	Canola	cytosol	44.82	35.84
CDY12764	Canola	cytosol	44.94	35.59
CDX69686	Canola	nucleus	45.54	35.33
CDX85690	Canola	nucleus	45.54	35.33
CDX91165	Canola	nucleus	45.54	35.23
CDX92532	Canola	nucleus	46.75	34.83
HORVU3Hr1G108180.1	Barley	mitochondrion	6.99	34.73
CDX70876	Canola	cytosol	46.51	34.62
CDY13998	Canola	nucleus	46.51	34.59
CDX97187	Canola	nucleus	43.86	34.4
Os01t0964800-01	Rice	mitochondrion	23.86	34.2
CDX88891	Canola	cytosol, mitochondrion, nucleus	46.51	34.01
CDX77534	Canola	cytosol	44.82	33.48
CDY49416	Canola	cytosol	44.1	32.71
CDY28580	Canola	plasma membrane	36.14	28.74
CDY44086	Canola	plasma membrane, vacuole	36.27	28.61
CDX77871	Canola	cytosol	32.65	28.56
CDY21795	Canola	cytosol	32.41	28.11
CDY31624	Canola	cytosol	31.69	26.75
CDX87989	Canola	cytosol	31.45	26.05
CDY39843	Canola	cytosol	8.43	17.33
CDY43762	Canola	cytosol	8.31	16.12
CDX81201	Canola	cytosol	8.43	15.91
CDY60046	Canola	cytosol	8.55	15.85
CDY31347	Canola	cytosol	8.19	15.6
CDX84451	Canola	cytosol	8.19	15.25
CDY46423	Canola	cytosol	6.63	14.51
CDY02190	Canola	mitochondrion	7.71	14.45
CDY16215	Canola	cytosol	6.63	14.25
CDY51633	Canola	mitochondrion	7.59	14.19
CDX97668	Canola	cytosol	7.71	13.42
CDY56827	Canola	cytosol	7.71	13.42
CDY57523	Canola	cytosol	7.59	13.38
CDY43240	Canola	cytosol	7.59	13.35
CDY56518	Canola	cytosol, plastid	8.19	13.08
CDY28863	Canola	cytosol	7.95	12.69
CDY01845	Canola	plastid	7.83	12.57
CDX96062	Canola	plastid	7.83	12.55
CDY13609	Canola	cytosol	7.95	12.48
CDX99731	Canola	cytosol, plastid	7.95	12.34
CDX83586	Canola	cytosol, plastid	7.83	12.29
CDY44785	Canola	mitochondrion	6.39	12.24
CDX69479	Canola	cytosol	5.78	12.09
CDY26488	Canola	cytosol	5.78	12.06
CDY04192	Canola	cytosol	7.11	11.99
CDY39172	Canola	cytosol	7.11	11.99
CDY40735	Canola	mitochondrion	6.14	11.67
CDY40988	Canola	cytosol, plastid	7.47	11.29
CDY69131	Canola	cytosol	3.98	10.28
CDY34733	Canola	cytosol	3.86	9.55
CDY14709	Canola	nucleus	7.35	8.83
CDY20113	Canola	endoplasmic reticulum, extracellular	7.95	8.0
CDY21840	Canola	endoplasmic reticulum, extracellular	7.83	7.87

Protein Annotations

Gene3D:2.130.10.30	Gene3D:2.30.29.30	Gene3D:3.30.40.10	MapMan:35.1	GO:A0A078BTH6	InterPro:BRX_N
InterPro:Brevis_radix_dom	EnsemblPlants:CDX68076	ProteinID:CDX68076	ProteinID:CDX68076.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00099313001	InterPro:IPR000408	InterPro:IPR001849	InterPro:IPR009091
InterPro:IPR011993	InterPro:IPR013083	InterPro:IPR013591	InterPro:IPR017455	PFAM:PF00415	PFAM:PF01363
PFAM:PF08381	PFAM:PF13713	PFAM:PF16457	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50012
PFscan:PS50178	PFscan:PS51514	PANTHER:PTHR22870	PANTHER:PTHR22870:SF91	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens
SMART:SM00064	SUPFAM:SSF50729	SUPFAM:SSF50985	SUPFAM:SSF57903	UniParc:UPI0004EE78CE	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

BnaA07g21160D

Coordinates

chrLK031787:-:3721895..3726473

Molecular Weight (calculated)

91238.8 Da

IEP (calculated)

8.897

GRAVY (calculated)

-0.599

Length

830 amino acids

Sequence
(BLAST)

001: MADLVSYSNA ADHNLEQALN TLKKGTQLLK YGRKGKPKFY PFRLSSDEKS LIWISSSGEK RLKLASVSKI VPGQRTAVFQ RYLRPEKDYL SFSLLYYGKK
101: KSLDLICKDK VEAEVWIGGL KTLISGGQGG RSKIDGWSGG NISVDASRDV TSSSQSSSSA SASQGHSSPG TPFNFDPIPS PKSTEPEQSH VALDSKNMQT
201: KVSGSDGFRV SVSSAQSSSS HGSGADDSDA LGDVYIWGEV ICDNVVKIGI DKNASYLTTR TDVLVPKPLE SNIVLDVHQI ACGVRHASFV TRQGEVFTWG
301: EESGGRLGHG IGKDVFHPRL VESLTSCDFV ACGEFHTSLT SRNEVYTWGK GANGRLGHGD LEDRKVPTLV EALRDRHVKY VACGSNYTAA ICLHKWVSGA
401: EQSQCSSCRL AFGFTRKRHN CYNCGLVHCH SCSSKKAFRA ALAPSAGRLY RVCDSCYVKL SKVSEISETT SRRNSVVPRL SGENKDRLDK SEIRLAKFGA
501: SNMDLIKQLD SKAAKQGKKS DNFALGRNSQ LPSLMQLKDA APSGINSRSV SPFSRRSSPP RSATPMPSTS GIYFPVGVAD NMKKTNEILN QEIIKLRTQV
601: DSLTQKCELQ EVELKNSVKK TQEALALAEE ESAKSRAAKE AIKSLIAQLK DVAEKLPPGE SIKLGLDQNG FHFPEENGFH SSRSESMTSS VSSVAPFDFA
701: FANASWSNLQ SPKHTPRAGE RNNNNNNTAY PSDPRLSSSG QTGAENNTDQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR
801: EKVYEKYNVR VSEKPTASQT DRDEEEDITQ

Best Arabidopsis Sequence Match ( AT1G76950.1 )
(BLAST)

0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH

Arabidopsis Description

PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.