Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G512900.1 | Wheat | cytosol | 97.37 | 97.48 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 92.76 | 97.35 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 94.96 | 95.37 |
| KXG34192 | Sorghum | cytosol | 81.91 | 81.91 |
| Zm00001d011805_P001 | Maize | cytosol | 81.25 | 81.25 |
| Zm00001d006773_P001 | Maize | cytosol | 33.99 | 76.92 |
| TraesCS1B01G024400.1 | Wheat | cytosol, mitochondrion, nucleus | 74.56 | 74.97 |
| Os01t0964800-01 | Rice | mitochondrion | 47.37 | 74.61 |
| KRH08736 | Soybean | endoplasmic reticulum | 44.3 | 57.96 |
| GSMUA_Achr6P13030_001 | Banana | endoplasmic reticulum | 58.0 | 54.03 |
| CDY48550 | Canola | cytosol | 56.58 | 52.65 |
| KRG91629 | Soybean | cytosol | 62.72 | 52.09 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 64.47 | 52.08 |
| KRH35179 | Soybean | cytosol | 63.38 | 51.61 |
| Solyc04g071040.2.1 | Tomato | cytosol | 62.94 | 50.98 |
| GSMUA_Achr2P20470_001 | Banana | endoplasmic reticulum, plasma membrane | 55.15 | 50.96 |
| PGSC0003DMT400002081 | Potato | cytosol | 62.72 | 50.8 |
| KRH30227 | Soybean | cytosol | 24.89 | 50.33 |
| KRH70333 | Soybean | cytosol | 60.86 | 49.55 |
| AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 58.55 | 49.54 |
| CDY11586 | Canola | cytosol | 56.91 | 49.29 |
| CDY47138 | Canola | cytosol | 56.58 | 49.28 |
| Bra016214.1-P | Field mustard | cytosol | 56.03 | 48.67 |
| AT1G76950.1 | Thale cress | cytosol | 58.77 | 48.59 |
| KRH08750 | Soybean | cytosol | 33.88 | 48.51 |
| Bra003698.1-P | Field mustard | mitochondrion | 57.13 | 48.38 |
| CDX87557 | Canola | cytosol | 55.92 | 47.53 |
| Bra015708.1-P | Field mustard | cytosol | 55.92 | 47.49 |
| CDX88324 | Canola | cytosol | 55.04 | 47.31 |
| KRH30228 | Soybean | cytosol | 20.72 | 46.44 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 52.96 | 45.14 |
| CDX68076 | Canola | cytosol | 37.61 | 41.33 |
| TraesCS1B01G384600.1 | Wheat | cytosol | 44.19 | 38.42 |
| TraesCS1B01G252700.2 | Wheat | cytosol | 45.83 | 38.17 |
| TraesCS3B01G543500.1 | Wheat | cytosol | 44.52 | 37.28 |
| TraesCS7B01G090600.1 | Wheat | cytosol | 37.83 | 33.82 |
| TraesCS2B01G323100.1 | Wheat | unclear | 15.57 | 32.13 |
| TraesCS6B01G180900.1 | Wheat | cytosol | 13.38 | 30.12 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 32.89 | 29.1 |
| CDY70949 | Canola | cytosol | 11.29 | 29.1 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 33.88 | 28.96 |
| TraesCS7B01G200200.1 | Wheat | cytosol | 11.51 | 26.99 |
| TraesCS5B01G366300.1 | Wheat | mitochondrion | 12.5 | 26.03 |
| TraesCS3B01G347100.2 | Wheat | cytosol | 11.29 | 25.31 |
| TraesCS5B01G170800.1 | Wheat | cytosol | 12.94 | 24.58 |
| TraesCS2B01G254900.2 | Wheat | cytosol | 12.83 | 24.17 |
| TraesCS2B01G360200.1 | Wheat | cytosol | 10.96 | 18.38 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR013083 |
| InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 |
| PANTHER:PTHR22870:SF199 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50985 | SUPFAM:SSF57903 |
| EnsemblPlantsGene:TraesCS3B01G581600 | EnsemblPlants:TraesCS3B01G581600.2 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd00065 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:810267527..810270839
Molecular Weight (calculated)
98818.0 Da
IEP (calculated)
8.253
GRAVY (calculated)
-0.456
Length
912 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTKVAASDV IRVSTSSAPS TSSHGSAQDD YESSGDVYVW GEVICESAAR AGSDAVIKSA VRQDVLLPKP LESHLVLDVY HVDCGVKHAA LVTKNGEVFT
101: WGEESVGRLG HGSQEDYARP NLVNSLAVSD VDFVACGEFH TCAVTTAGEL YTWGDGTHNI GLLGHGTDIS HWIPKRISGA LDGLQVAYVS CGTWHTALIT
201: TTGQLFTFGD GTFGVLGHGN RESISCPREV ESLSGLRTIA VACGVWHTAA VVEVIVTQSS SSLSSGKLFT WGDGDKHRLG HGDKDPRVKP TCVASLIDYD
301: FHRIACGHGL TVGLTTSGQV WSMGNTVYGQ LGNPRSDGKL PCLVEEIMGE QVVQVACGSY HVAVLTVKSE VFTWGKGANG RLGHGDIDDR KIPTLVEALR
401: DRGVRHISCG ANFTAAICQH KLMPGADQSQ CTSCRQPFGF TRKRHNCHNC GHVHCNACTS RKVLRAALAP NPGKPYRVCD SCFLKLNNAI DSSAINKRKE
501: SVPRYSGESN SDSTKFAKAI IPSNLDMIRS LDSKAAKQGK KTDALSFLRS PQMSSLLQLR DIALSGGPDL SRPVPRPTRT PAVRSVNTSR AVSPFSRKPS
601: PPRSTTPVPT THGLSIAKTA TDNLTKKNEM LNQEVERLRG QVDSLRHRCE AQELELQKSA KKVQEAMTLV AEESAKSKAA KEVIKALTAQ LKDMAERLPP
701: DDGNEAKQSQ FPNGIESHAP IYSSVDLDSV HQPRNESINA LNTPSLHTGR SLHPNGVSGQ QRSPGVNENN EVSAHRHRVS SPHDGALSNR RAHSSSSDEL
801: FASSRRAADS ASMDTMSLQN GEDGYRSRGT LSLSSTEVKA EWIEQYEAGV YITLTTLLDG TRDLKRVRFS RRRFGEHQAE SWWNENHDKV YERYGVRSSE
901: RVSSAASTRS AR
101: WGEESVGRLG HGSQEDYARP NLVNSLAVSD VDFVACGEFH TCAVTTAGEL YTWGDGTHNI GLLGHGTDIS HWIPKRISGA LDGLQVAYVS CGTWHTALIT
201: TTGQLFTFGD GTFGVLGHGN RESISCPREV ESLSGLRTIA VACGVWHTAA VVEVIVTQSS SSLSSGKLFT WGDGDKHRLG HGDKDPRVKP TCVASLIDYD
301: FHRIACGHGL TVGLTTSGQV WSMGNTVYGQ LGNPRSDGKL PCLVEEIMGE QVVQVACGSY HVAVLTVKSE VFTWGKGANG RLGHGDIDDR KIPTLVEALR
401: DRGVRHISCG ANFTAAICQH KLMPGADQSQ CTSCRQPFGF TRKRHNCHNC GHVHCNACTS RKVLRAALAP NPGKPYRVCD SCFLKLNNAI DSSAINKRKE
501: SVPRYSGESN SDSTKFAKAI IPSNLDMIRS LDSKAAKQGK KTDALSFLRS PQMSSLLQLR DIALSGGPDL SRPVPRPTRT PAVRSVNTSR AVSPFSRKPS
601: PPRSTTPVPT THGLSIAKTA TDNLTKKNEM LNQEVERLRG QVDSLRHRCE AQELELQKSA KKVQEAMTLV AEESAKSKAA KEVIKALTAQ LKDMAERLPP
701: DDGNEAKQSQ FPNGIESHAP IYSSVDLDSV HQPRNESINA LNTPSLHTGR SLHPNGVSGQ QRSPGVNENN EVSAHRHRVS SPHDGALSNR RAHSSSSDEL
801: FASSRRAADS ASMDTMSLQN GEDGYRSRGT LSLSSTEVKA EWIEQYEAGV YITLTTLLDG TRDLKRVRFS RRRFGEHQAE SWWNENHDKV YERYGVRSSE
901: RVSSAASTRS AR
0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
Arabidopsis Description
PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.