Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35179 | Soybean | cytosol | 95.36 | 93.48 |
| KRH08750 | Soybean | cytosol | 49.64 | 85.56 |
| KRH70333 | Soybean | cytosol | 84.88 | 83.21 |
| KRH08736 | Soybean | endoplasmic reticulum | 50.73 | 79.91 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 81.88 | 79.63 |
| KRH30227 | Soybean | cytosol | 31.69 | 77.16 |
| PGSC0003DMT400002081 | Potato | cytosol | 78.51 | 76.55 |
| Solyc04g071040.2.1 | Tomato | cytosol | 78.14 | 76.2 |
| KRH30228 | Soybean | cytosol | 27.14 | 73.22 |
| CDY70949 | Canola | cytosol | 23.5 | 72.88 |
| AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 70.67 | 71.99 |
| CDY11586 | Canola | cytosol | 67.94 | 70.85 |
| CDY47138 | Canola | cytosol | 67.3 | 70.58 |
| Bra016214.1-P | Field mustard | cytosol | 67.12 | 70.19 |
| AT1G76950.1 | Thale cress | cytosol | 70.4 | 70.08 |
| Bra003698.1-P | Field mustard | mitochondrion | 67.94 | 69.27 |
| CDX88324 | Canola | cytosol | 66.3 | 68.61 |
| Bra015708.1-P | Field mustard | cytosol | 67.03 | 68.53 |
| CDX87557 | Canola | cytosol | 66.94 | 68.5 |
| CDY48550 | Canola | cytosol | 60.93 | 68.27 |
| Os01t0964800-01 | Rice | mitochondrion | 35.25 | 66.84 |
| GSMUA_Achr2P20470_001 | Banana | endoplasmic reticulum, plasma membrane | 60.02 | 66.77 |
| CDX68076 | Canola | cytosol | 50.46 | 66.75 |
| KXG34192 | Sorghum | cytosol | 54.46 | 65.57 |
| Zm00001d011805_P001 | Maize | cytosol | 54.1 | 65.13 |
| GSMUA_Achr8P07850_001 | Banana | cytosol | 65.3 | 64.89 |
| Zm00001d006773_P001 | Maize | cytosol | 23.77 | 64.76 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 52.46 | 63.51 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 52.46 | 63.44 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 50.18 | 63.41 |
| TraesCS1D01G019900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 52.46 | 63.37 |
| EES18851 | Sorghum | cytosol, plastid | 52.82 | 63.32 |
| GSMUA_Achr6P13030_001 | Banana | endoplasmic reticulum | 56.38 | 63.23 |
| TraesCS1B01G024400.1 | Wheat | cytosol, mitochondrion, nucleus | 52.09 | 63.06 |
| TraesCS1A01G020400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 52.09 | 63.06 |
| Zm00001d035723_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 52.64 | 63.03 |
| TraesCS3A01G512900.1 | Wheat | cytosol | 52.28 | 63.01 |
| TraesCS3B01G581600.2 | Wheat | cytosol | 52.09 | 62.72 |
| Os05t0106700-00 | Rice | mitochondrion | 52.64 | 61.49 |
| Os04t0686200-01 | Rice | plasma membrane | 57.1 | 59.32 |
| EES13137 | Sorghum | cytosol | 56.65 | 58.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 61.11 | 58.2 |
| TraesCS2A01G581400.1 | Wheat | cytosol | 55.65 | 57.1 |
| TraesCS2D01G589800.1 | Wheat | cytosol | 55.56 | 57.01 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 55.56 | 57.01 |
| Zm00001d002876_P001 | Maize | mitochondrion | 56.38 | 56.95 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 55.46 | 56.6 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 8.29 | 54.49 |
| KRG99075 | Soybean | nucleus | 53.01 | 52.62 |
| KRH14571 | Soybean | nucleus | 52.73 | 52.3 |
| KRH73555 | Soybean | nucleus | 52.73 | 52.26 |
| KRH45937 | Soybean | nucleus | 52.37 | 51.85 |
| KRH00393 | Soybean | cytosol | 49.64 | 50.98 |
| KRH31700 | Soybean | cytosol | 50.0 | 50.93 |
| KRH69117 | Soybean | cytosol | 50.0 | 50.93 |
| KRH40796 | Soybean | cytosol | 33.97 | 49.73 |
| KRH45886 | Soybean | nucleus | 42.35 | 48.84 |
| KRG99112 | Soybean | cytosol | 42.08 | 47.14 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 38.16 | 40.06 |
| KRG98005 | Soybean | cytosol | 35.79 | 36.73 |
| KRH30884 | Soybean | cytosol | 35.88 | 36.69 |
| KRH59606 | Soybean | cytosol | 12.48 | 31.35 |
| KRH53944 | Soybean | plastid | 13.3 | 30.8 |
| KRH63996 | Soybean | nucleus | 13.3 | 30.29 |
| KRH40960 | Soybean | cytosol | 9.11 | 29.59 |
| KRH63955 | Soybean | mitochondrion | 11.2 | 29.5 |
| KRH22127 | Soybean | cytosol | 13.02 | 29.48 |
| KRH27216 | Soybean | cytosol | 13.3 | 28.91 |
| KRH53977 | Soybean | cytosol, mitochondrion, nucleus | 8.2 | 28.12 |
| KRG93861 | Soybean | nucleus | 10.02 | 27.85 |
| KRH46563 | Soybean | mitochondrion | 11.2 | 27.7 |
| KRH45102 | Soybean | cytosol, nucleus, peroxisome | 11.75 | 27.22 |
| KRH01383 | Soybean | cytosol | 11.48 | 26.58 |
| KRG97505 | Soybean | cytosol | 12.57 | 25.79 |
| KRH31377 | Soybean | cytosol | 12.39 | 25.61 |
| KRH49501 | Soybean | cytosol | 4.01 | 25.43 |
| KRH59226 | Soybean | cytosol | 11.75 | 24.16 |
| KRH74759 | Soybean | nucleus | 11.57 | 22.56 |
| KRH69375 | Soybean | nucleus | 11.66 | 21.66 |
Protein Annotations
| EntrezGene:100811999 | Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02012694 |
| InterPro:BRX_N | InterPro:Brevis_radix_dom | ncoils:Coil | EnsemblPlantsGene:GLYMA_20G165400 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | UniProt:I1NH07 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 |
| InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | EnsemblPlants:KRG91629 | ProteinID:KRG91629 | ProteinID:KRG91629.1 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16457 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF91 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI000233D8F6 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:40286407..40294670
Molecular Weight (calculated)
119429.0 Da
IEP (calculated)
8.401
GRAVY (calculated)
-0.435
Length
1098 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADLVSYRNA DRDIDQALIA LKKGAQLLKY GRKGKPKFCP FRLSNDESSL IWISSSGERN LKLSSVSRII PGQRTAVFQR YLRPEKDYLS FSLIYNNGKR
0101: SLDLICKDKV EVEVWIAGLK ALISSGQGGR SKIDGWSDGG LHLDDSRDLT SNSPSESSVS ASRDLSSPDV YVSLANTSPH SFHSENTLNF ERSHAPSNPS
0201: NMQVKGSSSD VFRVSVSSAP STSSHGSAPD DYDALGDVYI WGEVICENVV KVGAEKSASY FSPRTDILLP RPLESNVVLD VLQIACGVKH AALVTRQGEL
0301: FTWGEESGGR LGHGVGKNVV QPRLVEAMAS TTVDFVACGE FHTCAVTMAG ELYTWGDGTH NAGLLGHGTD VSHWIPKRIA GPLEGLQVAL VTCGPWHTAL
0401: ITSTGQLFTF GDGTFGVLGH GDRENVSYPR EVESLSGLRT IAVACGVWHT AAIIEVIVTQ SSASVSSGKL FTWGDGDKNR LGHGDKDARL EPTCVPSLIE
0501: DNFHRIACGH SLTVGLTTSG RVFTMGSTVY GQLGNPQSDG KLPCLVEDKF AGESVEEIAC GAYHVAVLTS KNEVFTWGKG ANGRLGHGDV EDRKSPTLVE
0601: ALKDRHVKYI ACGSNYSSAI CLHKWVSGAE QSQCSACRQA FGFTRKRHNC YNCGLVHCHS CSSRKALRAA LAPNPGKPYR VCDSCFVKLN KVAELGNNNR
0701: RNAMPRLSGE NKDRLEKPEL RLTKTAVPSN MDLIKQLDSK AAKQGKKADT FSLVRTSQPQ SLLQLKDVVL STAIDLKRTA PRPVLTSSGV SSRSVSPFSR
0801: RPSPPRSATP IPTTSGLSFS KSITDSLKKT NELLNQEVLK LRGQVETLRQ RCELQELELQ RSTKKAQEAM AVAAEESAKS KAAKEVIKSL TAQLKNLSER
0901: LPPGAYDAEN IRPAYLPNGL EPNGIRYPDL NGEHHTRAES ISGSSLASIG LESSLMNRTD GTLPGSYGAN HYQQNRGSVT SNGTDDYPNV KLPNGSGMIQ
1001: PSSSTVSDTV DGGRDSGDFQ DDESGLRSRN AIVPANSNQV EAEWIEQYEP GVYITLVALR DGTRDLKRVR FSRRRFGEHQ AETWWSENRD RVYKRYNV
0101: SLDLICKDKV EVEVWIAGLK ALISSGQGGR SKIDGWSDGG LHLDDSRDLT SNSPSESSVS ASRDLSSPDV YVSLANTSPH SFHSENTLNF ERSHAPSNPS
0201: NMQVKGSSSD VFRVSVSSAP STSSHGSAPD DYDALGDVYI WGEVICENVV KVGAEKSASY FSPRTDILLP RPLESNVVLD VLQIACGVKH AALVTRQGEL
0301: FTWGEESGGR LGHGVGKNVV QPRLVEAMAS TTVDFVACGE FHTCAVTMAG ELYTWGDGTH NAGLLGHGTD VSHWIPKRIA GPLEGLQVAL VTCGPWHTAL
0401: ITSTGQLFTF GDGTFGVLGH GDRENVSYPR EVESLSGLRT IAVACGVWHT AAIIEVIVTQ SSASVSSGKL FTWGDGDKNR LGHGDKDARL EPTCVPSLIE
0501: DNFHRIACGH SLTVGLTTSG RVFTMGSTVY GQLGNPQSDG KLPCLVEDKF AGESVEEIAC GAYHVAVLTS KNEVFTWGKG ANGRLGHGDV EDRKSPTLVE
0601: ALKDRHVKYI ACGSNYSSAI CLHKWVSGAE QSQCSACRQA FGFTRKRHNC YNCGLVHCHS CSSRKALRAA LAPNPGKPYR VCDSCFVKLN KVAELGNNNR
0701: RNAMPRLSGE NKDRLEKPEL RLTKTAVPSN MDLIKQLDSK AAKQGKKADT FSLVRTSQPQ SLLQLKDVVL STAIDLKRTA PRPVLTSSGV SSRSVSPFSR
0801: RPSPPRSATP IPTTSGLSFS KSITDSLKKT NELLNQEVLK LRGQVETLRQ RCELQELELQ RSTKKAQEAM AVAAEESAKS KAAKEVIKSL TAQLKNLSER
0901: LPPGAYDAEN IRPAYLPNGL EPNGIRYPDL NGEHHTRAES ISGSSLASIG LESSLMNRTD GTLPGSYGAN HYQQNRGSVT SNGTDDYPNV KLPNGSGMIQ
1001: PSSSTVSDTV DGGRDSGDFQ DDESGLRSRN AIVPANSNQV EAEWIEQYEP GVYITLVALR DGTRDLKRVR FSRRRFGEHQ AETWWSENRD RVYKRYNV
0001: MADLVSYGNV VRDIEQALIA LKKGAQLLKY GRKGKPKFCP FRLSNDETSL IWISNGGEKR LKLATVSKIV PGQRTAVFQR YLRPDKDYLS FSLIYSNRKR
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain [Source:TAIR;Acc:AT5G42140]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.