Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63955 | Soybean | mitochondrion | 90.31 | 69.3 |
| VIT_07s0031g02850.t01 | Wine grape | mitochondrion | 67.19 | 51.19 |
| CDY44785 | Canola | mitochondrion | 62.19 | 45.96 |
| AT5G08710.1 | Thale cress | mitochondrion | 61.88 | 45.62 |
| Bra028647.1-P | Field mustard | mitochondrion | 61.88 | 45.31 |
| CDY40735 | Canola | mitochondrion | 61.88 | 45.31 |
| GSMUA_Achr10P... | Banana | mitochondrion | 59.06 | 45.0 |
| HORVU1Hr1G016430.4 | Barley | cytosol | 55.62 | 44.84 |
| Solyc05g056590.2.1 | Tomato | cytosol | 37.5 | 43.64 |
| TraesCS1D01G078800.1 | Wheat | mitochondrion | 56.25 | 42.96 |
| EES09892 | Sorghum | mitochondrion | 55.94 | 42.82 |
| TraesCS1A01G076400.1 | Wheat | mitochondrion | 55.31 | 42.24 |
| Os11t0545800-01 | Rice | mitochondrion | 55.62 | 41.88 |
| Zm00001d052624_P007 | Maize | plastid | 50.0 | 34.93 |
| KRH53944 | Soybean | plastid | 26.25 | 17.72 |
| KRG93861 | Soybean | nucleus | 21.56 | 17.47 |
| KRH40960 | Soybean | cytosol | 18.44 | 17.46 |
| KRH59606 | Soybean | cytosol | 23.75 | 17.39 |
| KRH63996 | Soybean | nucleus | 25.94 | 17.22 |
| KRH46563 | Soybean | mitochondrion | 23.44 | 16.89 |
| KRH45102 | Soybean | cytosol, nucleus, peroxisome | 22.81 | 15.4 |
| KRH01383 | Soybean | cytosol | 22.5 | 15.19 |
| KRH22127 | Soybean | cytosol | 22.5 | 14.85 |
| KRH27216 | Soybean | cytosol | 22.81 | 14.46 |
| KRH74759 | Soybean | nucleus | 24.69 | 14.03 |
| KRH08750 | Soybean | cytosol | 27.81 | 13.97 |
| KRH69375 | Soybean | nucleus | 24.06 | 13.03 |
| KRH30228 | Soybean | cytosol | 15.94 | 12.53 |
| KRG97505 | Soybean | cytosol | 20.62 | 12.34 |
| KRH31377 | Soybean | cytosol | 20.31 | 12.24 |
| KRH49501 | Soybean | cytosol | 6.56 | 12.14 |
| KRH59226 | Soybean | cytosol | 20.0 | 11.98 |
| KRH45886 | Soybean | nucleus | 26.56 | 8.93 |
| KRH40796 | Soybean | cytosol | 20.62 | 8.8 |
| KRG99075 | Soybean | nucleus | 30.31 | 8.77 |
| KRH45937 | Soybean | nucleus | 30.31 | 8.75 |
| KRH14571 | Soybean | nucleus | 30.0 | 8.67 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 27.81 | 8.51 |
| KRH73555 | Soybean | nucleus | 29.38 | 8.48 |
| KRG98005 | Soybean | cytosol | 28.12 | 8.41 |
| KRG99112 | Soybean | cytosol | 25.62 | 8.37 |
| KRH30884 | Soybean | cytosol | 27.81 | 8.29 |
| KRG91629 | Soybean | cytosol | 28.12 | 8.2 |
| KRH70333 | Soybean | cytosol | 27.81 | 7.95 |
| KRH69117 | Soybean | cytosol | 26.56 | 7.88 |
| KRH31700 | Soybean | cytosol | 26.56 | 7.88 |
| KRH00393 | Soybean | cytosol | 26.25 | 7.86 |
| KRH35179 | Soybean | cytosol | 27.19 | 7.77 |
| KRH08736 | Soybean | endoplasmic reticulum | 11.25 | 5.16 |
| KRH30227 | Soybean | cytosol | 6.25 | 4.43 |
Protein Annotations
| EMBL:ACUP02003491 | EnsemblPlants:KRH53977 | EnsemblPlantsGene:GLYMA_06G158500 | Gene3D:2.130.10.30 | InterPro:IPR000408 | InterPro:IPR009091 |
| InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF245 | PFAM:PF00415 | PFscan:PS50012 |
| PRINTS:PR00633 | ProteinID:KRH53977 | ProteinID:KRH53977.1 | SUPFAM:SSF50985 | UniParc:UPI0006ED7563 | UniProt:A0A0R0JML6 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:13028905..13035459
Molecular Weight (calculated)
34110.6 Da
IEP (calculated)
7.671
GRAVY (calculated)
-0.076
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: LRGRGSWRCG GTVILGELGL GNLDSQWKPV VCPAFRDRTL KAIACGGAHT LFLTDNGCVY ATGLNDFGQL GVSESKHYSV EPLCVFGEEK KVVQVSAGYN
101: HSCAITVDGE LYMWGKNTSV QLGLGKRAPN IVPLPTKVEY LNGINIKMAA LGSDHSLAIS DGGEAFSWGV GVSGRLGHGH ESSILGFFKS YSEYTPRLIK
201: DLEGIKRLKA MSDATKPSLI GELPSSKVVC GGYHTCVLTN QGPFLKSSVS QLSCGWKNTA AISEGRVFTW GWGGSNGTFS EGHGSDVDYI NPTRVCFGED
301: VKALQVSCGF NHTGAILEYA
101: HSCAITVDGE LYMWGKNTSV QLGLGKRAPN IVPLPTKVEY LNGINIKMAA LGSDHSLAIS DGGEAFSWGV GVSGRLGHGH ESSILGFFKS YSEYTPRLIK
201: DLEGIKRLKA MSDATKPSLI GELPSSKVVC GGYHTCVLTN QGPFLKSSVS QLSCGWKNTA AISEGRVFTW GWGGSNGTFS EGHGSDVDYI NPTRVCFGED
301: VKALQVSCGF NHTGAILEYA
001: MLTRAIGRVR IPVSRIQGSN CTSGLLKDSK LGPIGVCCSR WVSSESGKRF AAMWGSGDYG RLGLGNLDSQ WTPAVCSALS DHSITAVACG GAHTLFLTET
101: RRVFATGLND CGQLGVSDVK SHAMDPLEVS GLDKDILHIS AGYYHSAAIT VDGELYMWGK NSSGQLGLGK KAARVVRVPT KVEALHGITI QSVALGSEHS
201: VAVTDGGEVL SWGGGGSGRL GHGHQSSLFG ILRSNSEFTP RLIKELEGIK VTNVAAGLLH SACTDENGSA FMFGEKSINK MGFGGVRNAT TPSIISEVPY
301: AEEVACGGYH TCVVTRGGEL YTWGSNENGC LGTDSTYVSH SPVRVEGPFL ESTVSQVSCG WKHTAAISDN NVFTWGWGGS HGTFSVDGHS SGGQLGHGSD
401: VDYARPAMVD LGKNVRAVHI SCGFNHTAAV LEHF
101: RRVFATGLND CGQLGVSDVK SHAMDPLEVS GLDKDILHIS AGYYHSAAIT VDGELYMWGK NSSGQLGLGK KAARVVRVPT KVEALHGITI QSVALGSEHS
201: VAVTDGGEVL SWGGGGSGRL GHGHQSSLFG ILRSNSEFTP RLIKELEGIK VTNVAAGLLH SACTDENGSA FMFGEKSINK MGFGGVRNAT TPSIISEVPY
301: AEEVACGGYH TCVVTRGGEL YTWGSNENGC LGTDSTYVSH SPVRVEGPFL ESTVSQVSCG WKHTAAISDN NVFTWGWGGS HGTFSVDGHS SGGQLGHGSD
401: VDYARPAMVD LGKNVRAVHI SCGFNHTAAV LEHF
Arabidopsis Description
RUG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.