Factsheet for AT5G08710.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40735	Canola	mitochondrion	86.87	86.27
Bra028647.1-P	Field mustard	mitochondrion	86.87	86.27
CDY44785	Canola	mitochondrion	85.94	86.14
VIT_07s0031g02850.t01	Wine grape	mitochondrion	64.75	66.9
KRH63955	Soybean	mitochondrion	61.75	64.27
KRH53977	Soybean	cytosol, mitochondrion, nucleus	45.62	61.88
Solyc05g056590.2.1	Tomato	cytosol	39.17	61.82
GSMUA_Achr10P...	Banana	mitochondrion	55.99	57.86
EES09892	Sorghum	mitochondrion	54.84	56.94
HORVU1Hr1G016430.4	Barley	cytosol	51.84	56.68
TraesCS1A01G076400.1	Wheat	mitochondrion	54.15	56.09
TraesCS1D01G078800.1	Wheat	mitochondrion	54.15	56.09
Os11t0545800-01	Rice	mitochondrion	53.46	54.59
Zm00001d052624_P007	Maize	plastid	50.0	47.38
AT1G27060.1	Thale cress	cytosol	24.88	27.98
AT3G02510.1	Thale cress	cytosol	24.42	26.97
AT5G16040.1	Thale cress	cytosol	23.96	26.26
AT5G63860.1	Thale cress	cytosol	25.35	25.0
AT3G15430.2	Thale cress	cytosol	22.58	20.08
AT3G02300.2	Thale cress	cytosol	21.89	19.71
AT5G60870.2	Thale cress	mitochondrion	20.05	19.25
AT3G26100.5	Thale cress	cytosol, plastid	21.2	17.29
AT5G12350.1	Thale cress	nucleus	31.8	12.84
AT1G69710.1	Thale cress	cytosol	30.18	12.58
AT5G19420.2	Thale cress	mitochondrion	32.03	12.2
AT5G42140.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	29.03	11.69
AT1G65920.1	Thale cress	cytosol	26.73	11.53
AT3G47660.4	Thale cress	cytosol	26.04	11.41
AT3G23270.2	Thale cress	cytosol	27.19	11.2
AT1G76950.1	Thale cress	cytosol	28.34	11.15
AT4G14368.1	Thale cress	cytosol	28.11	11.03

Protein Annotations

Gene3D:2.130.10.30	MapMan:35.1	EntrezGene:830771	UniProt:A0A178UAH3	ProteinID:AED91340.1	EMBL:AK118882
ArrayExpress:AT5G08710	EnsemblPlantsGene:AT5G08710	RefSeq:AT5G08710	TAIR:AT5G08710	RefSeq:AT5G08710-TAIR-G	EnsemblPlants:AT5G08710.1
TAIR:AT5G08710.1	EMBL:BT005498	GO:GO:0008150	InterPro:IPR000408	InterPro:IPR009091	RefSeq:NP_680156.2
ProteinID:OAO90102.1	PFAM:PF00415	PO:PO:0000293	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012
PANTHER:PTHR22870	PANTHER:PTHR22870:SF245	UniProt:Q8GWF2	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SUPFAM:SSF50985
UniParc:UPI000000C680	SEG:seg	:	:	:	:

Description

RUG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH3]

Coordinates

chr5:-:2834649..2838214

Molecular Weight (calculated)

45561.7 Da

IEP (calculated)

7.023

GRAVY (calculated)

-0.071

Length

434 amino acids

Sequence
(BLAST)

001: MLTRAIGRVR IPVSRIQGSN CTSGLLKDSK LGPIGVCCSR WVSSESGKRF AAMWGSGDYG RLGLGNLDSQ WTPAVCSALS DHSITAVACG GAHTLFLTET
101: RRVFATGLND CGQLGVSDVK SHAMDPLEVS GLDKDILHIS AGYYHSAAIT VDGELYMWGK NSSGQLGLGK KAARVVRVPT KVEALHGITI QSVALGSEHS
201: VAVTDGGEVL SWGGGGSGRL GHGHQSSLFG ILRSNSEFTP RLIKELEGIK VTNVAAGLLH SACTDENGSA FMFGEKSINK MGFGGVRNAT TPSIISEVPY
301: AEEVACGGYH TCVVTRGGEL YTWGSNENGC LGTDSTYVSH SPVRVEGPFL ESTVSQVSCG WKHTAAISDN NVFTWGWGGS HGTFSVDGHS SGGQLGHGSD
401: VDYARPAMVD LGKNVRAVHI SCGFNHTAAV LEHF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.