CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40735	Canola	mitochondrion	95.84	94.97
AT5G08710.1	Thale cress	mitochondrion	86.14	85.94
VIT_07s0031g02850.t01	Wine grape	mitochondrion	63.28	65.24
KRH63955	Soybean	mitochondrion	61.43	63.79
Solyc05g056590.2.1	Tomato	cytosol	39.72	62.55
KRH53977	Soybean	cytosol, mitochondrion, nucleus	45.96	62.19
GSMUA_Achr10P...	Banana	mitochondrion	57.04	58.81
EES09892	Sorghum	mitochondrion	55.43	57.42
HORVU1Hr1G016430.4	Barley	cytosol	52.42	57.18
TraesCS1D01G078800.1	Wheat	mitochondrion	54.27	56.09
TraesCS1A01G076400.1	Wheat	mitochondrion	54.27	56.09
Os11t0545800-01	Rice	mitochondrion	54.27	55.29
Zm00001d052624_P007	Maize	plastid	51.27	48.47
CDY69131	Canola	cytosol	20.55	27.73
CDY46423	Canola	cytosol	24.25	27.7
CDY16215	Canola	cytosol	24.02	26.94
CDY34733	Canola	cytosol	19.86	25.67
CDY43762	Canola	cytosol	25.17	25.47
CDX69479	Canola	cytosol	23.09	25.19
CDY39843	Canola	cytosol	23.33	25.0
CDY31347	Canola	cytosol	25.17	25.0
CDY26488	Canola	cytosol	22.86	24.87
CDX81201	Canola	cytosol	24.94	24.55
CDX84451	Canola	cytosol	24.94	24.22
CDY60046	Canola	cytosol	24.94	24.11
CDY02190	Canola	mitochondrion	20.55	20.09
CDY51633	Canola	mitochondrion	20.55	20.05
CDY57523	Canola	cytosol	21.25	19.53
CDY43240	Canola	cytosol	21.25	19.49
CDY56827	Canola	cytosol	21.25	19.29
CDX97668	Canola	cytosol	21.25	19.29
CDY01845	Canola	plastid	21.94	18.38
CDX96062	Canola	plastid	21.48	17.95
CDY28863	Canola	cytosol	20.55	17.12
CDY04192	Canola	cytosol	19.4	17.07
CDY39172	Canola	cytosol	19.4	17.07
CDY56518	Canola	cytosol, plastid	20.09	16.73
CDX99731	Canola	cytosol, plastid	20.55	16.64
CDX83586	Canola	cytosol, plastid	20.09	16.45
CDY13609	Canola	cytosol	19.86	16.26
CDY40988	Canola	cytosol, plastid	18.94	14.94
CDY14709	Canola	nucleus	23.56	14.76
CDY66504	Canola	cytosol	27.25	14.3
CDX87986	Canola	cytosol	6.7	14.08
CDX91165	Canola	nucleus	31.64	12.77
CDX85690	Canola	nucleus	31.41	12.71
CDX97187	Canola	nucleus	30.72	12.57
CDY48550	Canola	cytosol	27.94	12.35
CDX69686	Canola	nucleus	30.48	12.34
CDY44086	Canola	plasma membrane, vacuole	29.1	11.98
CDY28580	Canola	plasma membrane	28.87	11.97
CDY13998	Canola	nucleus	30.25	11.74
CDY12764	Canola	cytosol	28.41	11.74
CDX77871	Canola	cytosol	25.64	11.7
CDX88324	Canola	cytosol	28.64	11.69
CDY47138	Canola	cytosol	28.18	11.65
CDX87557	Canola	cytosol	28.87	11.65
CDY21795	Canola	cytosol	25.64	11.6
CDY11586	Canola	cytosol	28.18	11.59
CDX92532	Canola	nucleus	29.79	11.58
CDX88891	Canola	cytosol, mitochondrion, nucleus	30.02	11.45
CDX85076	Canola	cytosol	27.25	11.37
CDY70949	Canola	cytosol	9.24	11.3
CDY31624	Canola	cytosol	25.4	11.19
CDY49416	Canola	cytosol	28.64	11.08
CDX70876	Canola	cytosol	28.41	11.03
CDY20113	Canola	endoplasmic reticulum, extracellular	21.02	11.03
CDY21840	Canola	endoplasmic reticulum, extracellular	20.79	10.9
CDX87989	Canola	cytosol	24.94	10.78
CDX77534	Canola	cytosol	27.48	10.71
CDX68076	Canola	cytosol	12.24	6.39

Protein Annotations

EnsemblPlants:CDY44785	EnsemblPlantsGene:GSBRNA2T00080786001	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF245	PFAM:PF00415	PFscan:PS50012	PRINTS:PR00633
ProteinID:CDY44785	ProteinID:CDY44785.1	ScanProsite:PS00626	SEG:seg	SUPFAM:SSF50985	UniParc:UPI0004EE90A1
UniProt:A0A078I1N9	MapMan:35.1	:	:	:	:

Description

BnaC02g01020DBnaC02g01020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1N9]

Coordinates

chrLK032601:-:93432..96736

Molecular Weight (calculated)

45967.3 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.121

Length

433 amino acids

Sequence
(BLAST)

001: MLLTRALGRI RISGSNHFNG IISNSKLDTT IGVSRSRRWL SSESGKRFAA MWGSGDYGRL GLGSLESRWR PAVCSALSDH HSVRALACGG AHTLFLTETR
101: RVFATGLNDC GQLGVSHVKT HAMEPLEVSG IENDILHISA GYYHSAAITV DGELYMWGKN TSGQLGLGKN AARVVHVPTK VQALNGIIIK SVALGSEHSI
201: AVTDGGEVLS WGGGGSGRLG HGHESSFFGI LKSKSEFTPR LIKELEGIKV KNVAAGLLHT VCTDENGSAF MFGERSINKM GFGGVRNATT PSIISEVPYA
301: EEVACGGYHT CVVTRGGELY TWGSNENGCL GTESTYVSHS PVRVEGPFLE SDVTHVSCGW KHTAAISDNK VFTWGWGGSH GTFSDDGHSS GGQLGHGSDV
401: DYAIPAMVNL GKNVRAVHIS CGFNHTGAVL EHF

Best Arabidopsis Sequence Match ( AT5G08710.1 )
(BLAST)

001: MLTRAIGRVR IPVSRIQGSN CTSGLLKDSK LGPIGVCCSR WVSSESGKRF AAMWGSGDYG RLGLGNLDSQ WTPAVCSALS DHSITAVACG GAHTLFLTET
101: RRVFATGLND CGQLGVSDVK SHAMDPLEVS GLDKDILHIS AGYYHSAAIT VDGELYMWGK NSSGQLGLGK KAARVVRVPT KVEALHGITI QSVALGSEHS
201: VAVTDGGEVL SWGGGGSGRL GHGHQSSLFG ILRSNSEFTP RLIKELEGIK VTNVAAGLLH SACTDENGSA FMFGEKSINK MGFGGVRNAT TPSIISEVPY
301: AEEVACGGYH TCVVTRGGEL YTWGSNENGC LGTDSTYVSH SPVRVEGPFL ESTVSQVSCG WKHTAAISDN NVFTWGWGGS HGTFSVDGHS SGGQLGHGSD
401: VDYARPAMVD LGKNVRAVHI SCGFNHTAAV LEHF

Arabidopsis Description

RUG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.