Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G63860.1 | CDY12145 | AT2G32950.1 | 19165148 |
| AT5G63860.1 | CDY52540 | AT2G32950.1 | 19165148 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029198.1-P | Field mustard | cytosol | 93.58 | 99.03 |
| CDY39843 | Canola | cytosol | 86.24 | 93.07 |
| AT5G63860.1 | Thale cress | cytosol | 92.66 | 91.82 |
| CDX81201 | Canola | cytosol | 91.74 | 90.91 |
| CDY43762 | Canola | cytosol | 87.84 | 89.49 |
| CDY60046 | Canola | cytosol | 91.74 | 89.29 |
| CDX84451 | Canola | cytosol | 88.3 | 86.32 |
| VIT_07s0031g02560.t01 | Wine grape | cytosol | 80.28 | 78.65 |
| Solyc05g018620.2.1 | Tomato | cytosol | 53.21 | 75.57 |
| GSMUA_Achr6P17690_001 | Banana | cytosol | 74.54 | 74.03 |
| GSMUA_Achr3P19000_001 | Banana | nucleus | 75.69 | 73.5 |
| EES10837 | Sorghum | cytosol | 73.85 | 72.69 |
| Zm00001d003632_P003 | Maize | extracellular | 73.17 | 72.01 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 72.48 | 71.66 |
| TraesCS2D01G304900.2 | Wheat | cytosol | 72.02 | 70.88 |
| TraesCS2A01G306400.3 | Wheat | cytosol | 72.02 | 70.88 |
| TraesCS2B01G323100.1 | Wheat | unclear | 71.79 | 70.81 |
| KRH59606 | Soybean | cytosol | 70.64 | 70.48 |
| Os04t0435700-01 | Rice | plasma membrane | 73.17 | 70.42 |
| Os02t0554100-01 | Rice | cytosol, plasma membrane | 73.17 | 70.42 |
| KRH53944 | Soybean | plastid | 74.54 | 68.57 |
| KRH63996 | Soybean | nucleus | 75.0 | 67.84 |
| TraesCS6B01G180900.1 | Wheat | cytosol | 62.84 | 67.65 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 68.12 | 67.19 |
| TraesCS6D01G142500.1 | Wheat | golgi | 67.43 | 66.82 |
| KRH40960 | Soybean | cytosol | 49.54 | 63.91 |
| TraesCS6A01G153100.1 | Wheat | golgi | 67.66 | 62.77 |
| CDY34733 | Canola | cytosol | 21.1 | 27.46 |
| CDY69131 | Canola | cytosol | 18.58 | 25.23 |
| CDY44785 | Canola | mitochondrion | 25.0 | 25.17 |
| CDY40735 | Canola | mitochondrion | 24.77 | 24.71 |
| CDY16215 | Canola | cytosol | 21.79 | 24.61 |
| CDY46423 | Canola | cytosol | 21.33 | 24.54 |
| CDX69479 | Canola | cytosol | 22.25 | 24.43 |
| CDY26488 | Canola | cytosol | 22.02 | 24.12 |
| CDY02190 | Canola | mitochondrion | 22.71 | 22.35 |
| CDY51633 | Canola | mitochondrion | 22.71 | 22.3 |
| CDX97668 | Canola | cytosol | 24.31 | 22.22 |
| CDY56827 | Canola | cytosol | 24.31 | 22.22 |
| CDY43240 | Canola | cytosol | 23.39 | 21.61 |
| CDY57523 | Canola | cytosol | 23.17 | 21.44 |
| CDY04192 | Canola | cytosol | 23.85 | 21.14 |
| CDY39172 | Canola | cytosol | 23.62 | 20.93 |
| CDY01845 | Canola | plastid | 23.62 | 19.92 |
| CDX96062 | Canola | plastid | 23.39 | 19.69 |
| CDY28863 | Canola | cytosol | 23.17 | 19.42 |
| CDY56518 | Canola | cytosol, plastid | 22.71 | 19.04 |
| CDY13609 | Canola | cytosol | 22.94 | 18.9 |
| CDX83586 | Canola | cytosol, plastid | 22.94 | 18.9 |
| CDX99731 | Canola | cytosol, plastid | 22.48 | 18.32 |
| CDY40988 | Canola | cytosol, plastid | 22.48 | 17.85 |
| CDY66504 | Canola | cytosol | 30.73 | 16.24 |
| CDY47138 | Canola | cytosol | 36.24 | 15.09 |
| CDX69686 | Canola | nucleus | 35.78 | 14.58 |
| CDX97187 | Canola | nucleus | 35.32 | 14.56 |
| CDY11586 | Canola | cytosol | 35.09 | 14.53 |
| CDX85690 | Canola | nucleus | 35.32 | 14.39 |
| CDX91165 | Canola | nucleus | 35.09 | 14.26 |
| CDY31624 | Canola | cytosol | 32.11 | 14.24 |
| CDY48550 | Canola | cytosol | 31.65 | 14.08 |
| CDX92532 | Canola | nucleus | 35.78 | 14.0 |
| CDX87989 | Canola | cytosol | 31.88 | 13.87 |
| CDY21795 | Canola | cytosol | 30.05 | 13.69 |
| CDY13998 | Canola | nucleus | 34.86 | 13.62 |
| CDX87986 | Canola | cytosol | 6.42 | 13.59 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 35.32 | 13.57 |
| CDX77871 | Canola | cytosol | 29.36 | 13.49 |
| CDY14709 | Canola | nucleus | 21.33 | 13.46 |
| CDY20113 | Canola | endoplasmic reticulum, extracellular | 25.0 | 13.21 |
| CDX85076 | Canola | cytosol | 31.42 | 13.2 |
| CDY21840 | Canola | endoplasmic reticulum, extracellular | 24.77 | 13.08 |
| CDX70876 | Canola | cytosol | 33.26 | 13.0 |
| CDY12764 | Canola | cytosol | 30.96 | 12.88 |
| CDX87557 | Canola | cytosol | 31.65 | 12.86 |
| CDX88324 | Canola | cytosol | 31.19 | 12.82 |
| CDY70949 | Canola | cytosol | 10.32 | 12.71 |
| CDY28580 | Canola | plasma membrane | 30.05 | 12.55 |
| CDY44086 | Canola | plasma membrane, vacuole | 30.28 | 12.55 |
| CDX77534 | Canola | cytosol | 31.65 | 12.42 |
| CDY49416 | Canola | cytosol | 31.19 | 12.15 |
| CDX68076 | Canola | cytosol | 15.6 | 8.19 |
Protein Annotations
| Gene3D:2.130.10.30 | MapMan:26.1.3.1 | UniProt:A0A078H1G2 | EnsemblPlants:CDY31347 | ProteinID:CDY31347 | ProteinID:CDY31347.1 |
| GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009881 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0038023 |
| GO:GO:0042803 | EnsemblPlantsGene:GSBRNA2T00047537001 | InterPro:IPR000408 | InterPro:IPR009091 | PFAM:PF00415 | PRINTS:PR00633 |
| ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF317 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SUPFAM:SSF50985 | UniParc:UPI0004EE926C | InterPro:UVR8 | SEG:seg | : | : |
Description
BnaA02g33940DBnaA02g33940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1G2]
Coordinates
chrLK032270:+:355576..359051
Molecular Weight (calculated)
46619.4 Da
IEP (calculated)
5.838
GRAVY (calculated)
-0.375
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGEVTPPP RKVLIISAGA SHSVALLSGE VVCSWGRGED GQLGHGDAED RSSPTQLSAL DEHQIVSVTC GADHTVAYSQ SRLEVYSWGW GDFGRLGHGN
101: SSDLFTPLPI KALHGVMIKQ IACGDSHCLA VTMDGEVQSW GRNQNGQLGL GNTEDSLVPQ KIQAFEGIRI KMVAAGAEHT AAVTEDGDLY GWGWGRYGNL
201: GLGDRNDRLV PERVTSAGGE KMSMVACGWR HTISVSYSGA LYTYGWSKYG QLGHGDLEDH LVPHKLEALG NSVISQISGG WRHTMALTSD GKLYGWGWNK
301: FGQVGMGNNL DQCSPVQVRF PDDQALVQVS CGWRHTLAVT ERNNVFAWGR GTNGQLGIGE SLDRNSPKII EALSVDGASG QHIESSSFDP SSGKSWVSPS
401: ERYAVVPGET GQTDSTSKGN GGDISVPQTD AKRVRL
101: SSDLFTPLPI KALHGVMIKQ IACGDSHCLA VTMDGEVQSW GRNQNGQLGL GNTEDSLVPQ KIQAFEGIRI KMVAAGAEHT AAVTEDGDLY GWGWGRYGNL
201: GLGDRNDRLV PERVTSAGGE KMSMVACGWR HTISVSYSGA LYTYGWSKYG QLGHGDLEDH LVPHKLEALG NSVISQISGG WRHTMALTSD GKLYGWGWNK
301: FGQVGMGNNL DQCSPVQVRF PDDQALVQVS CGWRHTLAVT ERNNVFAWGR GTNGQLGIGE SLDRNSPKII EALSVDGASG QHIESSSFDP SSGKSWVSPS
401: ERYAVVPGET GQTDSTSKGN GGDISVPQTD AKRVRL
001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI
Arabidopsis Description
UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.