Factsheet for AT5G63860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037755.1-P	Field mustard	cytosol	88.18	93.27
Bra029198.1-P	Field mustard	cytosol	87.05	92.96
Bra024242.1-P	Field mustard	cytosol	86.82	92.94
CDY31347	Canola	cytosol	91.82	92.66
CDX81201	Canola	cytosol	92.27	92.27
CDY43762	Canola	cytosol	89.32	91.82
CDY60046	Canola	cytosol	93.18	91.52
CDX84451	Canola	cytosol	89.77	88.56
CDY39843	Canola	cytosol	81.14	88.37
VIT_07s0031g02560.t01	Wine grape	cytosol	80.91	80.0
Solyc05g018620.2.1	Tomato	cytosol	53.86	77.2
GSMUA_Achr6P17690_001	Banana	cytosol	75.45	75.63
GSMUA_Achr3P19000_001	Banana	nucleus	75.68	74.16
EES10837	Sorghum	cytosol	73.41	72.91
HORVU2Hr1G076180.1	Barley	cytosol, endoplasmic reticulum	72.73	72.56
Zm00001d003632_P003	Maize	extracellular	72.73	72.23
TraesCS2D01G304900.2	Wheat	cytosol	72.5	72.01
TraesCS2A01G306400.3	Wheat	cytosol	72.5	72.01
Os04t0435700-01	Rice	plasma membrane	74.09	71.96
TraesCS2B01G323100.1	Wheat	unclear	72.27	71.95
Os02t0554100-01	Rice	cytosol, plasma membrane	73.86	71.74
KRH59606	Soybean	cytosol	71.14	71.62
KRH53944	Soybean	plastid	75.0	69.62
KRH63996	Soybean	nucleus	75.23	68.67
TraesCS6B01G180900.1	Wheat	cytosol	62.73	68.15
HORVU6Hr1G030600.2	Barley	plasma membrane	68.41	68.1
TraesCS6D01G142500.1	Wheat	golgi	67.5	67.5
KRH40960	Soybean	cytosol	50.68	65.98
TraesCS6A01G153100.1	Wheat	golgi	67.73	63.4
AT5G16040.1	Thale cress	cytosol	23.18	25.76
AT3G02510.1	Thale cress	cytosol	22.95	25.7
AT1G27060.1	Thale cress	cytosol	22.5	25.65
AT5G08710.1	Thale cress	mitochondrion	25.0	25.35
AT3G15430.2	Thale cress	cytosol	25.45	22.95
AT5G60870.2	Thale cress	mitochondrion	22.5	21.9
AT3G02300.2	Thale cress	cytosol	22.27	20.33
AT3G26100.5	Thale cress	cytosol, plastid	23.86	19.74
AT5G12350.1	Thale cress	nucleus	35.0	14.33
AT5G42140.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	35.0	14.29
AT5G19420.2	Thale cress	mitochondrion	35.68	13.78
AT3G23270.2	Thale cress	cytosol	32.27	13.47
AT3G47660.4	Thale cress	cytosol	30.0	13.33
AT1G76950.1	Thale cress	cytosol	33.18	13.24
AT1G65920.1	Thale cress	cytosol	30.0	13.12
AT1G69710.1	Thale cress	cytosol	30.91	13.06
AT4G14368.1	Thale cress	cytosol	32.05	12.75

Protein Annotations

Gene3D:2.130.10.30	MapMan:26.1.3.1	PDB:4D9S	PDB:4DNU	PDB:4DNV	PDB:4DNW
PDB:4NAA	PDB:4NBM	PDB:4NC4	EntrezGene:836506	UniProt:A0A178UGG8	ProteinID:AED97805.1
EMBL:AF130441	ArrayExpress:AT5G63860	EnsemblPlantsGene:AT5G63860	RefSeq:AT5G63860	TAIR:AT5G63860	RefSeq:AT5G63860-TAIR-G
EnsemblPlants:AT5G63860.1	TAIR:AT5G63860.1	EMBL:AY125497	ProteinID:BAB11034.1	EMBL:BT000600	GO:GO:0000785
GO:GO:0003674	GO:GO:0003682	GO:GO:0004871	GO:GO:0005085	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009411
GO:GO:0009605	GO:GO:0009628	GO:GO:0009649	GO:GO:0009881	GO:GO:0009987	GO:GO:0010224
GO:GO:0018298	GO:GO:0019538	GO:GO:0038023	GO:GO:0042802	GO:GO:0042803	GO:GO:0050896
GO:GO:0065009	InterPro:IPR000408	InterPro:IPR009091	RefSeq:NP_201191.1	ProteinID:OAO93006.1	PFAM:PF00415
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PANTHER:PTHR22870
PANTHER:PTHR22870:SF317	UniProt:Q9FN03	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SUPFAM:SSF50985	UniParc:UPI00000AC5D0
InterPro:UVR8	Symbol:UVR8	:	:	:	:

Description

UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]

Coordinates

chr5:-:25554416..25559499

Molecular Weight (calculated)

47121.0 Da

IEP (calculated)

5.529

GRAVY (calculated)

-0.349

Length

440 amino acids

Sequence
(BLAST)

001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.