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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97668 Canola cytosol 89.96 92.03
CDY56827 Canola cytosol 89.55 91.61
Bra027244.1-P Field mustard cytosol 91.39 91.02
PGSC0003DMT400003817 Potato cytosol 57.58 73.56
KRH22127 Soybean cytosol 71.72 72.16
VIT_19s0014g03080.t01 Wine grape cytosol 70.9 70.33
PGSC0003DMT400032346 Potato plasma membrane 68.65 69.5
Solyc07g063300.2.1 Tomato plasma membrane 69.06 69.34
KRH27216 Soybean cytosol 71.52 69.11
GSMUA_Achr5P12060_001 Banana mitochondrion 58.2 62.83
Zm00001d019595_P001 Maize cytosol 61.68 62.32
KXG35074 Sorghum cytosol 61.68 62.32
TraesCS2D01G241400.2 Wheat cytosol 61.27 61.78
TraesCS2B01G254900.2 Wheat cytosol 61.27 61.78
Zm00001d005395_P001 Maize cytosol 61.07 61.7
GSMUA_Achr1P00100_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 61.68 61.18
TraesCS2A01G236300.4 Wheat cytosol 60.86 60.49
GSMUA_Achr2P10610_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 59.84 59.35
KRH49501 Soybean cytosol 19.67 55.49
CDY20113 Canola endoplasmic reticulum, extracellular 90.57 53.58
CDY21840 Canola endoplasmic reticulum, extracellular 89.96 53.15
Bra021109.1-P Field mustard endoplasmic reticulum, extracellular 88.93 52.8
AT5G63860.1 Thale cress cytosol 22.95 25.45
AT3G26100.5 Thale cress cytosol, plastid 27.05 24.81
AT3G02510.1 Thale cress cytosol 19.06 23.66
AT5G16040.1 Thale cress cytosol 19.06 23.48
AT1G27060.1 Thale cress cytosol 18.24 23.06
AT5G08710.1 Thale cress mitochondrion 20.08 22.58
AT3G02300.2 Thale cress cytosol 17.83 18.05
AT5G60870.2 Thale cress mitochondrion 15.37 16.59
AT5G12350.1 Thale cress nucleus 27.05 12.28
AT1G69710.1 Thale cress cytosol 26.02 12.2
AT1G76950.1 Thale cress cytosol 27.05 11.97
AT5G42140.2 Thale cress cytosol, endoplasmic reticulum, nucleus 26.23 11.87
AT3G23270.2 Thale cress cytosol 25.41 11.76
AT3G47660.4 Thale cress cytosol 23.36 11.52
AT5G19420.2 Thale cress mitochondrion 26.84 11.5
AT4G14368.1 Thale cress cytosol 25.41 11.21
AT1G65920.1 Thale cress cytosol 22.34 10.84
Protein Annotations
Gene3D:2.130.10.30MapMan:35.1EntrezGene:820782UniProt:A0A178VCE7ProteinID:AAF35409.1ProteinID:AEE75673.1
ProteinID:AEE75674.1ProteinID:ANM63641.1ProteinID:ANM63642.1ProteinID:ANM63643.1ProteinID:ANM63644.1ArrayExpress:AT3G15430
EnsemblPlantsGene:AT3G15430RefSeq:AT3G15430TAIR:AT3G15430RefSeq:AT3G15430-TAIR-GEnsemblPlants:AT3G15430.2TAIR:AT3G15430.2
EMBL:AY150379Unigene:At.24353ProteinID:BAB02372.1GO:GO:0005575GO:GO:0008150InterPro:IPR000408
InterPro:IPR009091RefSeq:NP_001325716.1RefSeq:NP_001325717.1RefSeq:NP_001325718.1RefSeq:NP_001325719.1RefSeq:NP_566512.1
RefSeq:NP_974323.1ProteinID:OAP03596.1PFAM:PF00415PFAM:PF13540PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00633ScanProsite:PS00626
PFscan:PS50012PANTHER:PTHR22870PANTHER:PTHR22870:SF302UniProt:Q9LDU3InterPro:RCC1/BLIP-IIInterPro:Reg_chr_condens
SUPFAM:SSF50985UniParc:UPI00000AC19E::::
Description
MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
Coordinates
chr3:+:5208559..5211745
Molecular Weight (calculated)
53031.6 Da
IEP (calculated)
8.097
GRAVY (calculated)
-0.062
Length
488 amino acids
Sequence
(BLAST)
001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.