Factsheet for AT3G02300.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57523	Canola	cytosol	92.74	94.9
Bra039169.1-P	Field mustard	cytosol	92.53	94.69
CDY43240	Canola	cytosol	92.53	94.49
PGSC0003DMT400003726	Potato	cytosol	75.31	77.9
VIT_14s0083g01020.t01	Wine grape	cytosol	76.56	77.2
Solyc02g089220.2.1	Tomato	mitochondrion	52.07	76.06
KRH45102	Soybean	cytosol, nucleus, peroxisome	72.82	74.05
KRH01383	Soybean	cytosol	72.2	73.42
GSMUA_Achr10P...	Banana	cytosol	70.75	70.6
TraesCS5D01G177900.1	Wheat	cytosol	70.12	70.42
TraesCS5B01G170800.1	Wheat	cytosol	70.12	70.42
HORVU5Hr1G053180.5	Barley	cytosol	70.12	70.42
TraesCS5A01G173400.1	Wheat	cytosol	69.5	69.94
Zm00001d033172_P001	Maize	cytosol	69.5	69.79
OQU91404	Sorghum	cytosol	69.29	69.01
Os03t0599600-01	Rice	mitochondrion	23.65	60.0
AT5G16040.1	Thale cress	cytosol	19.5	23.74
AT3G02510.1	Thale cress	cytosol	19.29	23.66
AT5G63860.1	Thale cress	cytosol	20.33	22.27
AT5G08710.1	Thale cress	mitochondrion	19.71	21.89
AT1G27060.1	Thale cress	cytosol	17.43	21.76
AT5G60870.2	Thale cress	mitochondrion	17.84	19.03
AT3G15430.2	Thale cress	cytosol	18.05	17.83
AT3G26100.5	Thale cress	cytosol, plastid	18.46	16.73
AT3G47660.4	Thale cress	cytosol	25.31	12.32
AT1G65920.1	Thale cress	cytosol	24.9	11.93
AT1G69710.1	Thale cress	cytosol	25.31	11.72
AT5G12350.1	Thale cress	nucleus	25.73	11.53
AT5G42140.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	25.31	11.32
AT5G19420.2	Thale cress	mitochondrion	26.35	11.15
AT3G23270.2	Thale cress	cytosol	24.27	11.1
AT1G76950.1	Thale cress	cytosol	25.31	11.06
AT4G14368.1	Thale cress	cytosol	24.07	10.49

Protein Annotations

Gene3D:2.130.10.30	MapMan:35.1	EntrezGene:821167	UniProt:A0A1I9LR23	ProteinID:AEE73790.1	ProteinID:ANM65031.1
ArrayExpress:AT3G02300	EnsemblPlantsGene:AT3G02300	RefSeq:AT3G02300	TAIR:AT3G02300	RefSeq:AT3G02300-TAIR-G	EnsemblPlants:AT3G02300.2
GO:GO:0008150	InterPro:IPR000408	InterPro:IPR009091	RefSeq:NP_001327030.1	RefSeq:NP_186879.2	PFAM:PF00415
PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PANTHER:PTHR22870	PANTHER:PTHR22870:SF321	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	SUPFAM:SSF50985	UniParc:UPI000848C3A5	SEG:seg	:	:

Description

Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR23]

Coordinates

chr3:+:461338..464222

Molecular Weight (calculated)

51814.5 Da

IEP (calculated)

5.315

GRAVY (calculated)

-0.116

Length

482 amino acids

Sequence
(BLAST)

001: MFSSLKGEFL KMDIGEIIGE VAPSVSIPTK SAIYVWGYNQ SGQTGRNEQE KLLRIPKQLP PELFGCPAGA NSRWLDISCG REHTAAVASD GSLFAWGANE
101: YGQLGDGTEV GRKHPKKVKQ LQSEFVKFVS CGAFCTAAIA EPRENDGTLS TSRLWVWGQN QGSNLPRLFS GAFPATTAIR QVSCGTAHVV ALSEEGLLQA
201: WGYNEQGQLG RGVTCEGLQA PRVINAYAKF LDEAPELVKI MQLSCGEYHT AALSDAGEVY TWGLGSMGQL GHVSLQSGDK ELIPRRVVGL DGVSMKEVAC
301: GGVHTCALSL EGALYAWGGG QAGQLGLGPQ SGFFFSVSNG SEMLLRNVPV LVIPTDVRLV ACGHSHTLVY MREGRICGWG YNSYGQAANE KSSYAWYPSP
401: VDWCVGQVRK LAAGGGHSAV LTDAFSLKEL CEFQLADSVN LSNASEIQDV AFRMGSEALA RLCERLREQL LDGDFTNGEE VY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.