Factsheet for AT3G02510.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34733	Canola	cytosol	81.68	95.82
Bra021435.1-P	Field mustard	cytosol	95.17	95.41
AT5G16040.1	Thale cress	cytosol	88.55	87.88
KRG93861	Soybean	nucleus	82.19	81.77
PGSC0003DMT400032945	Potato	extracellular	79.39	79.8
VIT_14s0006g03240.t01	Wine grape	cytosol	79.9	79.49
Solyc02g085780.2.1	Tomato	cytosol	78.88	79.49
Zm00001d050380_P004	Maize	cytosol	76.08	76.86
GSMUA_Achr9P15560_001	Banana	cytosol	72.52	76.61
KXG25196	Sorghum	cytosol	75.32	75.7
TraesCS7D01G282600.1	Wheat	cytosol	72.26	75.33
TraesCS7B01G200200.1	Wheat	cytosol	72.77	73.52
TraesCS7A01G284800.1	Wheat	cytosol	73.03	71.93
Zm00001d032229_P002	Maize	mitochondrion	75.32	70.64
HORVU7Hr1G062090.6	Barley	cytosol	72.52	68.84
AT1G27060.1	Thale cress	cytosol	25.7	26.17
AT5G08710.1	Thale cress	mitochondrion	26.97	24.42
AT5G63860.1	Thale cress	cytosol	25.7	22.95
AT5G60870.2	Thale cress	mitochondrion	23.41	20.35
AT3G02300.2	Thale cress	cytosol	23.66	19.29
AT3G26100.5	Thale cress	cytosol, plastid	25.95	19.17
AT3G15430.2	Thale cress	cytosol	23.66	19.06
AT5G12350.1	Thale cress	nucleus	29.52	10.79
AT3G23270.2	Thale cress	cytosol	27.74	10.34
AT1G76950.1	Thale cress	cytosol	28.75	10.24
AT5G42140.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	27.48	10.02
AT5G19420.2	Thale cress	mitochondrion	29.01	10.01
AT4G14368.1	Thale cress	cytosol	27.99	9.95
AT1G69710.1	Thale cress	cytosol	25.95	9.8
AT1G65920.1	Thale cress	cytosol	24.17	9.44
AT3G47660.4	Thale cress	cytosol	23.16	9.19
Os02t0684900-01	Rice	cytosol	0.25	0.23
Os09t0560500-01	Rice	mitochondrion, plastid	0.0	0.0

Protein Annotations

Gene3D:2.130.10.30	MapMan:35.1	EntrezGene:821100	ProteinID:AEE73820.1	EMBL:AK227929	ProteinID:ANM64215.1
ArrayExpress:AT3G02510	EnsemblPlantsGene:AT3G02510	RefSeq:AT3G02510	TAIR:AT3G02510	RefSeq:AT3G02510-TAIR-G	EnsemblPlants:AT3G02510.1
TAIR:AT3G02510.1	Unigene:At.20016	GO:GO:0008150	InterPro:IPR000408	InterPro:IPR009091	RefSeq:NP_001326260.1
RefSeq:NP_186900.3	PFAM:PF00415	PO:PO:0000005	PO:PO:0000293	PRINTS:PR00633	ScanProsite:PS00626
PFscan:PS50012	PANTHER:PTHR22870	PANTHER:PTHR22870:SF206	UniProt:Q0WSJ9	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens
SUPFAM:SSF50985	UniParc:UPI000034EF4B	SEG:seg	:	:	:

Description

Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:Q0WSJ9]

Coordinates

chr3:-:521794..524675

Molecular Weight (calculated)

42503.0 Da

IEP (calculated)

5.768

GRAVY (calculated)

-0.421

Length

393 amino acids

Sequence
(BLAST)

001: MVTATSIIAW GSGEDGQLGI GTNEEKEWAC VVEALEPYSV RSVVSGSRNS LAICDDGTMF TWGWNQRGTL GHQPETKTEN IPSRVKALAN VKITQAAIGG
101: WHCLAVDDQG RAYAWGGNEY GQCGEEPLKD EMGRPVRRDI VIPKRCAPKL TVRQVAAGGT HSVVLTREGH VWTWGQPWPP GDIKQISVPV RVQGLENVRL
201: IAVGAFHNLA LEEDGRLLAW GNNEYGQLGT GDTQPTSHPV PVQGLDDLTL VDIAAGGWHS TALTDKGEVY GWGRGEHGRL GLGDNDKSSK MVPQKVNLLA
301: EEDIIQVSCG GTHSVALTRD GRIFSFGRGD HGRLGYGRKV TTGQPLELPI KIPPPEGSFN HTDEEEEGKW SAKSIACGGR HTLAIVEWKS DDI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.