CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27216	Soybean	cytosol	96.91	93.07
PGSC0003DMT400003817	Potato	cytosol	60.21	76.44
VIT_19s0014g03080.t01	Wine grape	cytosol	77.53	76.42
PGSC0003DMT400032346	Potato	plasma membrane	72.58	73.03
Solyc07g063300.2.1	Tomato	plasma membrane	72.99	72.84
KRH49501	Soybean	cytosol	25.98	72.83
AT3G15430.2	Thale cress	cytosol	72.16	71.72
CDX97668	Canola	cytosol	69.28	70.44
CDY56827	Canola	cytosol	68.87	70.02
Bra027244.1-P	Field mustard	cytosol	70.72	70.0
GSMUA_Achr1P00100_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.07	68.09
GSMUA_Achr5P12060_001	Banana	mitochondrion	62.68	67.26
Zm00001d019595_P001	Maize	cytosol	66.19	66.46
KXG35074	Sorghum	cytosol	65.98	66.25
Zm00001d005395_P001	Maize	cytosol	65.15	65.42
TraesCS2D01G241400.2	Wheat	cytosol	64.74	64.88
TraesCS2B01G254900.2	Wheat	cytosol	64.74	64.88
GSMUA_Achr2P10610_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.36	64.43
TraesCS2A01G236300.4	Wheat	cytosol	64.74	63.95
CDY20113	Canola	endoplasmic reticulum, extracellular	70.93	41.7
CDY21840	Canola	endoplasmic reticulum, extracellular	70.93	41.65
Bra021109.1-P	Field mustard	endoplasmic reticulum, extracellular	70.31	41.48
KRG97505	Soybean	cytosol	27.84	25.23
KRH31377	Soybean	cytosol	27.42	25.05
KRH59226	Soybean	cytosol	26.8	24.34
KRG93861	Soybean	nucleus	19.38	23.8
KRH59606	Soybean	cytosol	20.82	23.11
KRH63955	Soybean	mitochondrion	19.59	22.78
KRH53977	Soybean	cytosol, mitochondrion, nucleus	14.85	22.5
KRH53944	Soybean	plastid	21.03	21.52
KRH63996	Soybean	nucleus	21.24	21.37
KRH08750	Soybean	cytosol	27.84	21.19
KRH40960	Soybean	cytosol	14.64	21.01
KRH30228	Soybean	cytosol	17.32	20.64
KRH74759	Soybean	nucleus	20.82	17.94
KRH45102	Soybean	cytosol, nucleus, peroxisome	17.53	17.93
KRH46563	Soybean	mitochondrion	16.29	17.79
KRH01383	Soybean	cytosol	17.32	17.72
KRH69375	Soybean	nucleus	20.82	17.09
KRH45886	Soybean	nucleus	28.25	14.39
KRG99075	Soybean	nucleus	30.31	13.29
KRH45937	Soybean	nucleus	30.1	13.16
KRG99112	Soybean	cytosol	26.39	13.06
KRG91629	Soybean	cytosol	29.48	13.02
KRH14571	Soybean	nucleus	29.69	13.01
KRH73555	Soybean	nucleus	29.28	12.82
KRH35179	Soybean	cytosol	29.28	12.68
KRH31700	Soybean	cytosol	27.63	12.43
KRH69117	Soybean	cytosol	27.22	12.24
KRH70333	Soybean	cytosol	28.25	12.23
KRH00393	Soybean	cytosol	26.8	12.16
KRH30884	Soybean	cytosol	26.39	11.92
KRG98005	Soybean	cytosol	25.98	11.78
KRH65503	Soybean	cytosol, mitochondrion, nucleus	24.33	11.28
KRH40796	Soybean	cytosol	15.46	10.0
KRH08736	Soybean	endoplasmic reticulum	10.93	7.6
KRH30227	Soybean	cytosol	3.71	3.99

Protein Annotations

EMBL:ACUP02008380	EnsemblPlants:KRH22127	EnsemblPlantsGene:GLYMA_13G279000	EntrezGene:100782653	Gene3D:2.130.10.30	InterPro:IPR000408
InterPro:IPR009091	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF302	PFAM:PF00415
PFAM:PF13540	PFscan:PS50012	PRINTS:PR00633	ProteinID:KRH22127	ProteinID:KRH22127.1	ScanProsite:PS00626
SEG:seg	SUPFAM:SSF50985	UniParc:UPI000233B958	UniProt:I1M3A9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr13:+:38006901..38012242

Molecular Weight (calculated)

53048.5 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.115

Length

485 amino acids

Sequence
(BLAST)

001: MGERCRHFSI EELPSHLVLE ILCSGRLSAM DLVCLELTSK TFGGSHGLHP FKFKSLVAFA AFQLCASHVT YARMGLNSQR ELYDRCGGNW KRVLRFLQSV
101: EQSSQMVETS SGNMQITTGK YHTLLISNSS VYSCGSGLCG VLGQGSETTQ CVAFTRIDFP PLARVVHVSA SFNHAAFVMQ SGEVFTCGDN SSSCCGHRDT
201: TRPIFRPRLV ESLKGIPCKQ VAAGLNFTVF LTRKGHVYTC GTNTHGQLGH GDTQDRPTPK MIEVLSSVVQ IAAGPSYILS VTENGTVYSF GSGANFCLGH
301: GEQHDELQPR AIQKFRRKGI HIVRVSAGDE HAVALDSNGY VYTWGKGYCG ALGHGDEIEK TTPELLTSLK NQLVVQVCAR KRKTFVLVDS GSVYGFGSMG
401: FGSLGFLDRR VSDKVLKPRI LDTLRTHHVS QISTGLYHTV VITSRGQIFG FGDNERAQLG HDTLRSCLEP TEIFIKDVSE DVESI

Best Arabidopsis Sequence Match ( AT3G15430.6 )
(BLAST)

001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC

Arabidopsis Description

MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.