CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30227	Soybean	cytosol	56.24	86.92
Zm00001d006773_P001	Maize	cytosol	34.29	59.31
KRH70333	Soybean	cytosol	93.26	58.04
KRH35179	Soybean	cytosol	83.07	51.7
KRG91629	Soybean	cytosol	79.91	50.73
VIT_18s0166g00210.t01	Wine grape	cytosol	78.05	48.18
KXG34192	Sorghum	cytosol	60.26	46.05
TraesCS1D01G019900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.83	45.87
CDY48550	Canola	cytosol	64.13	45.61
TraesCS1B01G024400.1	Wheat	cytosol, mitochondrion, nucleus	59.25	45.53
Zm00001d011805_P001	Maize	cytosol	59.54	45.5
TraesCS1A01G020400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.11	45.42
HORVU1Hr1G002740.1	Barley	cytosol, mitochondrion, nucleus, plastid	58.97	45.31
GSMUA_Achr6P13030_001	Banana	endoplasmic reticulum	63.56	45.25
EES18851	Sorghum	cytosol, plastid	59.11	44.98
TraesCS3A01G512900.1	Wheat	cytosol	58.68	44.9
HORVU3Hr1G112690.2	Barley	cytosol, plastid	58.39	44.82
Zm00001d035723_P001	Maize	cytosol, mitochondrion, nucleus, plastid	58.68	44.6
PGSC0003DMT400002081	Potato	cytosol	71.88	44.49
Solyc04g071040.2.1	Tomato	cytosol	71.74	44.41
TraesCS3B01G581600.2	Wheat	cytosol	57.96	44.3
TraesCS3D01G522600.2	Wheat	cytosol	54.66	43.84
Os05t0106700-00	Rice	mitochondrion	58.82	43.62
GSMUA_Achr2P20470_001	Banana	endoplasmic reticulum, plasma membrane	60.98	43.06
AT5G42140.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	65.28	42.21
AT1G76950.1	Thale cress	cytosol	66.28	41.89
Bra003698.1-P	Field mustard	mitochondrion	64.71	41.88
KRH40796	Soybean	cytosol	44.91	41.73
CDX87557	Canola	cytosol	63.56	41.29
Bra015708.1-P	Field mustard	cytosol	63.56	41.25
CDX88324	Canola	cytosol	62.12	40.81
CDY47138	Canola	cytosol	61.12	40.69
CDY11586	Canola	cytosol	61.26	40.55
Bra016214.1-P	Field mustard	cytosol	60.69	40.29
CDX68076	Canola	cytosol	46.77	39.28
GSMUA_Achr8P07850_001	Banana	cytosol	57.96	36.56
Os01t0964800-01	Rice	mitochondrion	29.41	35.41
Os04t0686200-01	Rice	plasma membrane	53.23	35.1
EES13137	Sorghum	cytosol	52.22	34.21
TraesCS2B01G609200.1	Wheat	cytosol	51.79	33.74
HORVU2Hr1G124270.22	Barley	cytosol, mitochondrion, nucleus	51.94	33.64
Zm00001d002876_P001	Maize	mitochondrion	52.37	33.58
GSMUA_AchrUn_...	Banana	nucleus	55.52	33.56
TraesCS2A01G581400.1	Wheat	cytosol	51.51	33.55
TraesCS2D01G589800.1	Wheat	cytosol	51.22	33.36
KRH08750	Soybean	cytosol	30.27	33.12
KRH14571	Soybean	nucleus	48.64	30.62
KRG99075	Soybean	nucleus	48.49	30.56
KRH73555	Soybean	nucleus	48.49	30.51
KRH45937	Soybean	nucleus	47.63	29.94
KRH00393	Soybean	cytosol	44.33	28.91
KRH69117	Soybean	cytosol	43.04	27.83
KRH31700	Soybean	cytosol	42.9	27.74
KRH45886	Soybean	nucleus	37.45	27.42
KRG99112	Soybean	cytosol	37.88	26.94
KRH65503	Soybean	cytosol, mitochondrion, nucleus	39.74	26.48
KRH30884	Soybean	cytosol	32.42	21.04
KRG98005	Soybean	cytosol	31.99	20.84
KRH49501	Soybean	cytosol	5.16	20.81
KRH40960	Soybean	cytosol	9.04	18.64
KRH30228	Soybean	cytosol	9.76	16.71
KRH59606	Soybean	cytosol	10.33	16.48
KRG93861	Soybean	nucleus	9.18	16.2
KRH63996	Soybean	nucleus	10.62	15.35
KRH53944	Soybean	plastid	10.33	15.19
KRH45102	Soybean	cytosol, nucleus, peroxisome	10.19	14.98
KRH63955	Soybean	mitochondrion	8.75	14.63
KRH01383	Soybean	cytosol	9.76	14.35
KRH46563	Soybean	mitochondrion	8.9	13.96
KRH53977	Soybean	cytosol, mitochondrion, nucleus	5.16	11.25
KRH22127	Soybean	cytosol	7.6	10.93
KRH27216	Soybean	cytosol	7.89	10.89
KRH74759	Soybean	nucleus	8.75	10.83
KRH31377	Soybean	cytosol	8.03	10.55
KRH59226	Soybean	cytosol	7.89	10.3
KRG97505	Soybean	cytosol	7.89	10.28
KRH69375	Soybean	nucleus	8.61	10.15
HORVU3Hr1G108180.1	Barley	mitochondrion	0.57	2.4
CDY70949	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.130.10.30	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A0R0FRM1	EMBL:ACUP02010202	InterPro:BRX_N
InterPro:Brevis_radix_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G170500	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR000408	InterPro:IPR009091	InterPro:IPR013083	InterPro:IPR013591	InterPro:IPR017455	EnsemblPlants:KRH08736
ProteinID:KRH08736	ProteinID:KRH08736.1	PFAM:PF00415	PFAM:PF01363	PFAM:PF08381	PFAM:PF13713
ScanProsite:PS00626	PFscan:PS50012	PFscan:PS50178	PFscan:PS51514	PANTHER:PTHR22870	PANTHER:PTHR22870:SF91
InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SMART:SM00064	SUPFAM:SSF50985	SUPFAM:SSF57903	UniParc:UPI0006ED51D8
InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr16:-:33075926..33079629

Molecular Weight (calculated)

75395.6 Da

IEP (calculated)

9.508

GRAVY (calculated)

-0.553

Length

697 amino acids

Sequence
(BLAST)

001: NVSYPREVES LLGLRTIAVA CGVWHTAAVV EVIATHSSTS ISSGKLFTWG DGDKNRLGHG DKEARLKPTC VAALIDSNFH KIACGHSLTA GLTKSGRVFT
101: MGSTVYGQLG NPQSDGKVPC LVGDKIARES IEEIACGAYH VAVLTSKNEV YTWGKGANGR LGHGDIEDRK TPALVEALKD RHVKYIACGS NYSAAICLHK
201: WVSGAEQSQC STCRQAFGFT RKRHNCYNCG LVHCHSCSSR KALRAAHAPN PGKPYRVCDS CYAKLNKVAE ASNSNRRNAL PRLSGENKDR LDKSDLRLSK
301: AVIHSNMDLI KQLDSKAAKQ GKKGDTFSLV HPSQPPSLLQ LKDVVLSSAL DLRRTVPRPV VAPSGVSSRS VSPFSRRPSP PRSATPIPTT SGLAFSKSIS
401: DSLKKTNELL NQEVQKLHAQ VESLRQRCEL QELELQRSAK NTQEAMALAA EESAKCKAAK EVIKSLTAQL KDLAEKLPPG VYDAENVRPA YLPNGIEPNG
501: IRHPDSNGEQ HSRAESISAS SLASMGLESA LLNRTAGNSP GTYGTNPHQQ IRSPVSSNGA NNYPDVKLPN RGGAIQASSG NVSDTADGRD SGNFHNGDSG
601: LKLRSVAPAA DSNQVEAEWI EQYEPGVYIT LVALSDGTRD LKRVRFSRRR FGEHQAETWW SENRDKVYER YNVRSTDKSA NQAARSSEGA VSPVSQT

Best Arabidopsis Sequence Match ( AT1G76950.1 )
(BLAST)

0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH

Arabidopsis Description

PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.