Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G581400.1 | Wheat | cytosol | 98.32 | 98.32 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 98.13 | 98.13 |
| Os04t0686200-01 | Rice | plasma membrane | 80.65 | 81.65 |
| EES13137 | Sorghum | cytosol | 79.35 | 79.79 |
| Zm00001d002876_P001 | Maize | mitochondrion | 77.38 | 76.17 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 11.59 | 74.25 |
| KRH08750 | Soybean | cytosol | 36.17 | 60.75 |
| GSMUA_Achr8P07850_001 | Banana | cytosol | 57.66 | 55.84 |
| KRG91629 | Soybean | cytosol | 57.01 | 55.56 |
| KRH35179 | Soybean | cytosol | 57.85 | 55.27 |
| PGSC0003DMT400002081 | Potato | cytosol | 57.76 | 54.88 |
| CDY70949 | Canola | cytosol | 18.13 | 54.8 |
| Solyc04g071040.2.1 | Tomato | cytosol | 57.57 | 54.71 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 57.66 | 54.65 |
| AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 54.86 | 54.45 |
| TraesCS1D01G019900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.07 | 54.24 |
| Bra016214.1-P | Field mustard | cytosol | 53.18 | 54.19 |
| CDY47138 | Canola | cytosol | 52.99 | 54.15 |
| CDX88324 | Canola | cytosol | 53.55 | 54.01 |
| CDY11586 | Canola | cytosol | 53.08 | 53.94 |
| KRH70333 | Soybean | cytosol | 56.07 | 53.57 |
| Bra003698.1-P | Field mustard | mitochondrion | 53.83 | 53.48 |
| Bra015708.1-P | Field mustard | cytosol | 53.64 | 53.45 |
| CDX87557 | Canola | cytosol | 53.46 | 53.31 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 42.99 | 52.93 |
| KRH30228 | Soybean | cytosol | 20.09 | 52.83 |
| AT1G76950.1 | Thale cress | cytosol | 54.3 | 52.67 |
| CDY48550 | Canola | cytosol | 47.94 | 52.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.7 | 51.69 |
| KRH08736 | Soybean | endoplasmic reticulum | 33.36 | 51.22 |
| CDX68076 | Canola | cytosol | 38.41 | 49.52 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 45.51 | 46.25 |
| KRH30227 | Soybean | cytosol | 18.69 | 44.35 |
| TraesCS1D01G240700.1 | Wheat | cytosol | 44.86 | 43.92 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 44.02 | 43.25 |
| TraesCS7D01G187100.3 | Wheat | cytosol | 38.32 | 40.16 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 33.55 | 35.09 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 33.36 | 33.65 |
| TraesCS6D01G142500.1 | Wheat | golgi | 13.08 | 31.82 |
| TraesCS2D01G304900.2 | Wheat | cytosol | 12.9 | 31.15 |
| TraesCS5D01G373300.1 | Wheat | mitochondrion | 11.96 | 29.22 |
| TraesCS2D01G241400.2 | Wheat | cytosol | 12.43 | 27.48 |
| TraesCS7D01G282600.1 | Wheat | cytosol | 9.35 | 26.53 |
| TraesCS1D01G078800.1 | Wheat | mitochondrion | 10.19 | 26.01 |
| TraesCS5D01G123500.1 | Wheat | mitochondrion, plastid | 5.14 | 24.66 |
| TraesCS3D01G312300.1 | Wheat | cytosol | 9.35 | 24.57 |
| TraesCS5D01G177900.1 | Wheat | cytosol | 10.93 | 24.38 |
| TraesCS2D01G340500.1 | Wheat | cytosol | 8.69 | 21.23 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 |
| InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 |
| PFAM:PF08381 | PFAM:PF13713 | InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 |
| PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF194 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2D01G589800 | EnsemblPlants:TraesCS2D01G589800.1 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 | TIGR:cd13365 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:646028546..646034283
Molecular Weight (calculated)
116874.0 Da
IEP (calculated)
8.256
GRAVY (calculated)
-0.489
Length
1070 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPVVDIDK ALIALKKGTQ LLKYGRKGKP KFTPFRLSTD ESTLIWVSSN QEKSLKLASV SRVLSGQRTL VFQRFLLPEK DHLSFSLIYK DGKRSLDLIC
0101: KDKVETQVWF TCLSALVSPG KHRSQPQHTD EMRSSALSFD CGRESSLSSS STFTTDSLEN KLSSANSKDR SSGEYAYSER TDVSDMQVKS VSSSDIRVSV
0201: SSALSTSSHG SGGEDSESFG DVYVWGEVMC DTASVSGSDG NTLSPGATTD ILVPKPLESN VMLDVSSVAC GVKHAALITR QAEVFTWGEE CSGRLGHGAG
0301: TSIFQPRLLE SLSTCNVEIM ACGEFHTCAV TATGDLYTWG DGTHNAGLLG HGSTVSHWIP KRVSGPLEGL QVSTVSCGTW HTALITTSGL LYTFGDGTFG
0401: ALGHGNRETI SYPKEVESLK GLRTISVSCG VWHSAAVVEI IMTQSNASSG KLFTWGDGDK YRLGHGDRAS KLKPTCVSSL IDYNFHKSAC GHTLTIGLTT
0501: SGHMFTVGSS VYGQLGNPNN DGRYARLVED KVGGGGVVEV ACGSYHVAVL TNAGEVYTWG KGANGRLGHG DIADRKVPTL VEALRDRSVK RIACGSSFTA
0601: AICQHKWVSG MEQSQCSACR QPFGFTRKRH NCYHCGLVHC HSCSSKKALR AALSPNPGKP YRVCDSCHMK LSKVMDSGVS YNRSNIPRVP GDTKAERMDT
0701: KANRVASSTS SDMIKSLDVK AAKQAKRSDH SPQFPAILQM NDVPFIGSGD LHTTGFTVTN GYPNDPRYTS QFLRMPYLSS PSSVSSESLE SFRDANELLK
0801: QEVQKLKEEV NSLRQQRELQ DAELKKSEAK ASEAAALAAE EASKSKAAKE VIKSLTAQVK EMAERLPAGD SDVKPPRVPY LPAGGVVSPE MGREGQKRYE
0901: PVSIHYSQTP TSVTSSWSNG LPPQAHQIGK PGDNTVAPHE NMFENFNKSR DFPATHQRTN SAMSGYRPRS EDFDRREAER FQINLQDWNT RGSGSPSNQV
1001: ESEWIEQFEP GVYLTLVTLH DGTKELKRVR FSRRRFAEHQ AESWWSDNHE KVYDKYNLRR TDRISSVLTS
0101: KDKVETQVWF TCLSALVSPG KHRSQPQHTD EMRSSALSFD CGRESSLSSS STFTTDSLEN KLSSANSKDR SSGEYAYSER TDVSDMQVKS VSSSDIRVSV
0201: SSALSTSSHG SGGEDSESFG DVYVWGEVMC DTASVSGSDG NTLSPGATTD ILVPKPLESN VMLDVSSVAC GVKHAALITR QAEVFTWGEE CSGRLGHGAG
0301: TSIFQPRLLE SLSTCNVEIM ACGEFHTCAV TATGDLYTWG DGTHNAGLLG HGSTVSHWIP KRVSGPLEGL QVSTVSCGTW HTALITTSGL LYTFGDGTFG
0401: ALGHGNRETI SYPKEVESLK GLRTISVSCG VWHSAAVVEI IMTQSNASSG KLFTWGDGDK YRLGHGDRAS KLKPTCVSSL IDYNFHKSAC GHTLTIGLTT
0501: SGHMFTVGSS VYGQLGNPNN DGRYARLVED KVGGGGVVEV ACGSYHVAVL TNAGEVYTWG KGANGRLGHG DIADRKVPTL VEALRDRSVK RIACGSSFTA
0601: AICQHKWVSG MEQSQCSACR QPFGFTRKRH NCYHCGLVHC HSCSSKKALR AALSPNPGKP YRVCDSCHMK LSKVMDSGVS YNRSNIPRVP GDTKAERMDT
0701: KANRVASSTS SDMIKSLDVK AAKQAKRSDH SPQFPAILQM NDVPFIGSGD LHTTGFTVTN GYPNDPRYTS QFLRMPYLSS PSSVSSESLE SFRDANELLK
0801: QEVQKLKEEV NSLRQQRELQ DAELKKSEAK ASEAAALAAE EASKSKAAKE VIKSLTAQVK EMAERLPAGD SDVKPPRVPY LPAGGVVSPE MGREGQKRYE
0901: PVSIHYSQTP TSVTSSWSNG LPPQAHQIGK PGDNTVAPHE NMFENFNKSR DFPATHQRTN SAMSGYRPRS EDFDRREAER FQINLQDWNT RGSGSPSNQV
1001: ESEWIEQFEP GVYLTLVTLH DGTKELKRVR FSRRRFAEHQ AESWWSDNHE KVYDKYNLRR TDRISSVLTS
0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
Arabidopsis Description
PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.