Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002876_P001 | Maize | mitochondrion | 91.26 | 89.33 |
| Os04t0686200-01 | Rice | plasma membrane | 81.95 | 82.5 |
| TraesCS2A01G581400.1 | Wheat | cytosol | 80.36 | 79.91 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 79.98 | 79.53 |
| TraesCS2D01G589800.1 | Wheat | cytosol | 79.79 | 79.35 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 80.17 | 79.28 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 10.81 | 68.86 |
| KRH08750 | Soybean | cytosol | 37.12 | 62.01 |
| CDY70949 | Canola | cytosol | 19.27 | 57.91 |
| KRG91629 | Soybean | cytosol | 58.46 | 56.65 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 59.68 | 56.24 |
| KRH35179 | Soybean | cytosol | 59.12 | 56.16 |
| PGSC0003DMT400002081 | Potato | cytosol | 59.21 | 55.95 |
| GSMUA_Achr8P07850_001 | Banana | cytosol | 57.99 | 55.84 |
| Solyc04g071040.2.1 | Tomato | cytosol | 59.02 | 55.77 |
| CDY47138 | Canola | cytosol | 54.79 | 55.68 |
| Bra016214.1-P | Field mustard | cytosol | 54.79 | 55.52 |
| CDY11586 | Canola | cytosol | 54.89 | 55.46 |
| KXG34192 | Sorghum | cytosol | 47.46 | 55.37 |
| AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 55.92 | 55.19 |
| CDX88324 | Canola | cytosol | 54.98 | 55.14 |
| KRH70333 | Soybean | cytosol | 57.89 | 55.0 |
| Bra003698.1-P | Field mustard | mitochondrion | 55.55 | 54.87 |
| Bra015708.1-P | Field mustard | cytosol | 55.26 | 54.75 |
| CDX87557 | Canola | cytosol | 55.08 | 54.61 |
| KRH30228 | Soybean | cytosol | 20.86 | 54.55 |
| AT1G76950.1 | Thale cress | cytosol | 56.11 | 54.13 |
| CDY48550 | Canola | cytosol | 49.53 | 53.78 |
| EES18851 | Sorghum | cytosol, plastid | 46.24 | 53.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.86 | 52.47 |
| KRH08736 | Soybean | endoplasmic reticulum | 34.21 | 52.22 |
| CDX68076 | Canola | cytosol | 40.23 | 51.57 |
| EES19890 | Sorghum | cytosol | 44.36 | 46.27 |
| EES01332 | Sorghum | cytosol | 44.74 | 45.08 |
| KXG34127 | Sorghum | cytosol | 38.91 | 44.9 |
| KRH30227 | Soybean | cytosol | 18.8 | 44.35 |
| KXG26989 | Sorghum | cytosol | 33.65 | 33.55 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 33.36 | 33.08 |
| EES10837 | Sorghum | cytosol | 13.63 | 32.73 |
| EER97183 | Sorghum | mitochondrion | 12.31 | 30.32 |
| KXG35074 | Sorghum | cytosol | 12.88 | 28.36 |
| OQU87663 | Sorghum | cytosol | 10.71 | 28.22 |
| EES09892 | Sorghum | mitochondrion | 10.71 | 27.27 |
| KXG25196 | Sorghum | cytosol | 9.96 | 27.11 |
| OQU91404 | Sorghum | cytosol | 12.03 | 26.45 |
| EES07101 | Sorghum | cytosol, plastid | 11.28 | 22.43 |
| KXG26580 | Sorghum | cytosol | 11.28 | 22.35 |
| EES12399 | Sorghum | cytosol, plastid | 10.81 | 21.74 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| UniProt:C5YB03 | ncoils:Coil | EnsemblPlants:EES13137 | ProteinID:EES13137 | ProteinID:EES13137.2 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0046872 | GO:GO:0055085 | InterPro:IPR000408 | InterPro:IPR009091 |
| InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 |
| PFAM:PF08381 | PFAM:PF13713 | InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 |
| PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF194 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SMART:SM00064 | EnsemblPlantsGene:SORBI_3006G275500 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI00081ADFC2 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:60653010..60659410
Molecular Weight (calculated)
116255.0 Da
IEP (calculated)
8.123
GRAVY (calculated)
-0.461
Length
1064 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPVDIDKA LIALKKGTQL LKYGRKGKPK FTPFRLSNDE STLIWVSNNK DKSLKLASVS RILSGQRTLV FQRFLLPEKD HLSFSLIYNG GKRSLDLICK
0101: DKIEAEAWFT GLSALICPGQ HGSQAQHIDG IRIAGLSFDG ARESSLSSSS TFTSDSLENK LSSANSTKDR SSGEYTYSER TDVSDMQVKS VSSSDIRISV
0201: SSALSTSSHG SGGEDSESFG DIYVWGEVIC DTISRSGSDR SAYSPGTTTD VLVPKPLESN VMLDVSYVAC GVKHAALVTR QSEVFTWGEE CSGRLGHGTG
0301: TNVFQPRLVE SLSICNVELI ACGEFHTCAV TATGDLYTWG DGTHNAGLLG HGSNVSHWIP KRVSGPLDGL PVSTVSCGTW HTALITSSGQ LYTFGDGTFG
0401: VLGHGNRASC SYPKEVESLK GLRTISVSCG VWHTAAVVEV IISQSNASSG KLFTWGDGDK YRLGHGDRSS KLKPTCIPSL IDYNFHKAAC GHTLTIGLTT
0501: SGHIFTVGSS VYGQLGNPNN DGRYPRLVEE QLGGGGVVEV ACGSYHVAVL TNAGEVYTWG KGANGRLGHG DIADRKVPTL VEALRDRSVK RVACGSSFTA
0601: AICQHKWVSG MEQSQCSACR QPFGFTRKRH NCYNCGLVHC HSCSSKKALR AALSPNPGKP YRVCDSCYVK LSKVLDSGVS YSRNTIPRIP GDTKAERIDT
0701: KANKVAPSSS SDMIRNLDVK AAKQTKKSDY SSQVPAMLQL KDIPFISAPD LQNSSTVANQ FPYDSRSTLP FLRMPYLNYS SSLSSESSES LRDANELLKQ
0801: EVQKLQAEVN SLRQEREQQD TELKKSEAKA HEAMNLATEE ASKLKTAKDV IKALTAQLKE MSERLPPGAC DVKNGHLMGA LASEMGRENQ MRYDQNSIQY
0901: PQTHASVASA RFGGLPAQIH QTSNYNETVM VPQESRGEHL NGIREFSPVQ QSANGGPIGY RYRPDDHDRR EVDRFQINLQ NLNMRSSSSP NNQVDAEWIE
1001: QYEPGVYLTL VSLCDGTKEL KRVRFSRRRF GEHQAESWWN DNREKVYEKY NVCGTDRLSS VTTA
0101: DKIEAEAWFT GLSALICPGQ HGSQAQHIDG IRIAGLSFDG ARESSLSSSS TFTSDSLENK LSSANSTKDR SSGEYTYSER TDVSDMQVKS VSSSDIRISV
0201: SSALSTSSHG SGGEDSESFG DIYVWGEVIC DTISRSGSDR SAYSPGTTTD VLVPKPLESN VMLDVSYVAC GVKHAALVTR QSEVFTWGEE CSGRLGHGTG
0301: TNVFQPRLVE SLSICNVELI ACGEFHTCAV TATGDLYTWG DGTHNAGLLG HGSNVSHWIP KRVSGPLDGL PVSTVSCGTW HTALITSSGQ LYTFGDGTFG
0401: VLGHGNRASC SYPKEVESLK GLRTISVSCG VWHTAAVVEV IISQSNASSG KLFTWGDGDK YRLGHGDRSS KLKPTCIPSL IDYNFHKAAC GHTLTIGLTT
0501: SGHIFTVGSS VYGQLGNPNN DGRYPRLVEE QLGGGGVVEV ACGSYHVAVL TNAGEVYTWG KGANGRLGHG DIADRKVPTL VEALRDRSVK RVACGSSFTA
0601: AICQHKWVSG MEQSQCSACR QPFGFTRKRH NCYNCGLVHC HSCSSKKALR AALSPNPGKP YRVCDSCYVK LSKVLDSGVS YSRNTIPRIP GDTKAERIDT
0701: KANKVAPSSS SDMIRNLDVK AAKQTKKSDY SSQVPAMLQL KDIPFISAPD LQNSSTVANQ FPYDSRSTLP FLRMPYLNYS SSLSSESSES LRDANELLKQ
0801: EVQKLQAEVN SLRQEREQQD TELKKSEAKA HEAMNLATEE ASKLKTAKDV IKALTAQLKE MSERLPPGAC DVKNGHLMGA LASEMGRENQ MRYDQNSIQY
0901: PQTHASVASA RFGGLPAQIH QTSNYNETVM VPQESRGEHL NGIREFSPVQ QSANGGPIGY RYRPDDHDRR EVDRFQINLQ NLNMRSSSSP NNQVDAEWIE
1001: QYEPGVYLTL VSLCDGTKEL KRVRFSRRRF GEHQAESWWN DNREKVYEKY NVCGTDRLSS VTTA
0001: MADLVSYGNV VRDIEQALIA LKKGAQLLKY GRKGKPKFCP FRLSNDETSL IWISNGGEKR LKLATVSKIV PGQRTAVFQR YLRPDKDYLS FSLIYSNRKR
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
0101: TLDLICKDKV EAEVWIAGLK ALISGQAGRS KIDGWSDGGL SIADSRDLTL SSPTNSSVCA SRDFNIADSP YNSTNFPRTS RTENSVSSER SHVASDSPNM
0201: LVRGTGSDAF RVSVSSVQSS SSHGSAPDDC DALGDVYIWG EVLCENVTKF GADKNIGYLG SRSDVLIPKP LESNVVLDVH HIACGVKHAA LVSRQGEVFT
0301: WGEASGGRLG HGMGKDVTGP QLIESLAATS IDFVACGEFH TCAVTMTGEI YTWGDGTHNA GLLGHGTDVS HWIPKRISGP LEGLQIASVS CGPWHTALIT
0401: STGQLFTFGD GTFGVLGHGD KETVFYPREV ESLSGLRTIA VACGVWHAAA IVEVIVTHSS SSVSSGKLFT WGDGDKSRLG HGDKEPRLKP TCVSALIDHT
0501: FHRVACGHSL TVGLTTSGKV YTMGSTVYGQ LGNPNADGKL PCLVEDKLTK DCVEEIACGA YHVAVLTSRN EVFTWGKGAN GRLGHGDVED RKAPTLVDAL
0601: KERHVKNIAC GSNFTAAICL HKWVSGTEQS QCSACRQAFG FTRKRHNCYN CGLVHCHSCS SKKSLKAALA PNPGKPYRVC DSCHSKLSKV SEANIDSRKN
0701: VMPRLSGENK DRLDKTEIRL AKSGIPSNID LIKQLDNRAA RQGKKADTFS LVRTSQTPLT QLKDALTNVA DLRRGPPKPA VTPSSSRPVS PFSRRSSPPR
0801: SVTPIPLNVG LGFSTSIAES LKKTNELLNQ EVVRLRAQAE SLRHRCEVQE FEVQKSVKKV QEAMSLAAEE SAKSEAAKEV IKSLTAQVKD IAALLPPGAY
0901: EAETTRTANL LNGFEQNGFH FTNANGQRQS RSDSMSDTSL ASPLAMPARS MNGLWRNSQS PRNTDASMGE LLSEGVRISN GFSEDGRNSR SSAASASNAS
1001: QVEAEWIEQY EPGVYITLLA LGDGTRDLKR VRFSRRRFRE QQAETWWSEN RERVYEKYNI RGTDRSSVAT SPISQSQF
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain [Source:TAIR;Acc:AT5G42140]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.