Factsheet for HORVU3Hr1G108180.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70949	Canola	cytosol	40.72	19.21
KRH30228	Soybean	cytosol	40.72	16.71
KRH08750	Soybean	cytosol	49.7	13.03
HORVU2Hr1G124270.22	Barley	cytosol, mitochondrion, nucleus	74.85	11.62
TraesCS2D01G589800.1	Wheat	cytosol	74.25	11.59
TraesCS2B01G609200.1	Wheat	cytosol	74.25	11.59
Os04t0686200-01	Rice	plasma membrane	70.66	11.16
EES13137	Sorghum	cytosol	68.86	10.81
Zm00001d002876_P001	Maize	mitochondrion	70.06	10.76
CDY48550	Canola	cytosol	55.09	9.39
HORVU1Hr1G002740.1	Barley	cytosol, mitochondrion, nucleus, plastid	50.3	9.26
HORVU3Hr1G112690.2	Barley	cytosol, plastid	50.3	9.25
HORVU5Hr1G089510.1	Barley	cytosol	19.76	9.17
HORVU3Hr1G076310.2	Barley	cytosol, mitochondrion, nucleus	24.55	9.03
CDY47138	Canola	cytosol	54.49	8.69
Bra016214.1-P	Field mustard	cytosol	54.49	8.67
HORVU2Hr1G076180.1	Barley	cytosol, endoplasmic reticulum	22.75	8.62
GSMUA_Achr8P07850_001	Banana	cytosol	56.89	8.6
HORVU1Hr1G016430.4	Barley	cytosol	20.36	8.56
CDY11586	Canola	cytosol	53.89	8.55
HORVU6Hr1G030600.2	Barley	plasma membrane	22.16	8.37
Bra003698.1-P	Field mustard	mitochondrion	53.89	8.36
AT5G42140.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	53.89	8.35
Solyc04g071040.2.1	Tomato	cytosol	56.29	8.35
PGSC0003DMT400002081	Potato	cytosol	56.29	8.35
KRG91629	Soybean	cytosol	54.49	8.29
HORVU7Hr1G038070.12	Barley	cytosol	46.11	8.17
AT1G76950.1	Thale cress	cytosol	53.89	8.16
VIT_18s0166g00210.t01	Wine grape	cytosol	55.09	8.15
KRH35179	Soybean	cytosol	54.49	8.12
HORVU1Hr1G078890.1	Barley	cytosol	50.9	8.09
HORVU2Hr1G083590.1	Barley	cytosol	21.56	8.0
CDX87557	Canola	cytosol	50.3	7.83
Bra015708.1-P	Field mustard	cytosol	50.3	7.82
KRH70333	Soybean	cytosol	52.1	7.77
CDX88324	Canola	cytosol	49.1	7.73
GSMUA_AchrUn_...	Banana	nucleus	51.5	7.46
HORVU5Hr1G053180.5	Barley	cytosol	20.96	7.29
HORVU7Hr1G062090.6	Barley	cytosol	17.37	7.0
CDX68076	Canola	cytosol	34.73	6.99
HORVU1Hr1G056870.2	Barley	cytosol, endoplasmic reticulum, nucleus	46.71	6.93
HORVU3Hr1G107820.4	Barley	endoplasmic reticulum	44.91	6.82
HORVU5Hr1G034530.6	Barley	cytosol	19.76	6.18
HORVU2Hr1G104550.10	Barley	cytosol, nucleus, plastid	34.73	5.02
HORVU6Hr1G066460.5	Barley	cytosol	31.14	4.87
HORVU0Hr1G028990.2	Barley	cytosol	2.4	1.02
KRH08736	Soybean	endoplasmic reticulum	2.4	0.57
KRH30227	Soybean	cytosol	1.2	0.44

Protein Annotations

EnsemblPlants:HORVU3Hr1G108180.1	EnsemblPlantsGene:HORVU3Hr1G108180	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF194	PFAM:PF00415	PFscan:PS50012	ScanProsite:PS00626
SUPFAM:SSF50985	UniParc:UPI000B481D6E	UniProt:A0A287MLY4	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr3H:+:674504689..674508033

Molecular Weight (calculated)

18549.3 Da

IEP (calculated)

7.152

GRAVY (calculated)

-0.033

Length

167 amino acids

Sequence
(BLAST)

001: MSQLCGLWCE ACCTYHKTGR GIYMARRMEW AAWSRGVPKP LESNVMLDVS YVACGVKHAA LITRQAEVFT WGEECSGRLG HGADTSIFQP RLLESLSTCN
101: VEIMVCGEFH TCVVTRTGDL YTWGDGTHNA DLLGHGSTVS HWIPKRVSGP LEAFRCRLFL AEHGIQL

Best Arabidopsis Sequence Match ( AT1G76950.1 )
(BLAST)

0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH

Arabidopsis Description

PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.