Factsheet for HORVU2Hr1G076180.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G323100.1	Wheat	unclear	97.96	97.74
TraesCS2D01G304900.2	Wheat	cytosol	97.96	97.52
TraesCS2A01G306400.3	Wheat	cytosol	97.28	96.84
Os04t0435700-01	Rice	plasma membrane	90.7	88.3
EES10837	Sorghum	cytosol	86.85	86.46
Zm00001d003632_P003	Maize	extracellular	86.39	86.0
GSMUA_Achr6P17690_001	Banana	cytosol	76.64	76.99
GSMUA_Achr3P19000_001	Banana	nucleus	77.55	76.17
HORVU6Hr1G030600.2	Barley	plasma membrane	74.6	74.43
Solyc05g018620.2.1	Tomato	cytosol	51.47	73.94
VIT_07s0031g02560.t01	Wine grape	cytosol	74.38	73.71
CDY43762	Canola	cytosol	71.43	73.6
Bra029198.1-P	Field mustard	cytosol	68.48	73.3
Bra024242.1-P	Field mustard	cytosol	68.25	73.24
Bra037755.1-P	Field mustard	cytosol	68.93	73.08
AT5G63860.1	Thale cress	cytosol	72.56	72.73
CDY31347	Canola	cytosol	71.66	72.48
CDX81201	Canola	cytosol	72.11	72.27
CDY60046	Canola	cytosol	72.79	71.65
CDX84451	Canola	cytosol	71.66	70.85
CDY39843	Canola	cytosol	63.72	69.55
KRH59606	Soybean	cytosol	65.53	66.13
KRH53944	Soybean	plastid	68.48	63.71
KRH63996	Soybean	nucleus	68.48	62.66
KRH40960	Soybean	cytosol	45.8	59.76
HORVU5Hr1G089510.1	Barley	cytosol	22.45	27.5
HORVU1Hr1G016430.4	Barley	cytosol	23.81	26.45
HORVU7Hr1G062090.6	Barley	cytosol	23.36	24.88
HORVU3Hr1G108180.1	Barley	mitochondrion	8.62	22.75
HORVU0Hr1G028990.2	Barley	cytosol	20.18	22.59
HORVU5Hr1G053180.5	Barley	cytosol	23.81	21.88
HORVU5Hr1G034530.6	Barley	cytosol	25.62	21.16
HORVU3Hr1G076310.2	Barley	cytosol, mitochondrion, nucleus	19.5	18.94
HORVU2Hr1G083590.1	Barley	cytosol	19.05	18.67
HORVU3Hr1G112690.2	Barley	cytosol, plastid	31.52	15.31
HORVU1Hr1G002740.1	Barley	cytosol, mitochondrion, nucleus, plastid	30.84	14.99
HORVU3Hr1G107820.4	Barley	endoplasmic reticulum	36.51	14.65
HORVU7Hr1G038070.12	Barley	cytosol	30.84	14.42
HORVU1Hr1G056870.2	Barley	cytosol, endoplasmic reticulum, nucleus	36.51	14.31
HORVU1Hr1G078890.1	Barley	cytosol	30.61	12.84
HORVU2Hr1G124270.22	Barley	cytosol, mitochondrion, nucleus	30.84	12.64
HORVU6Hr1G066460.5	Barley	cytosol	28.8	11.9
HORVU2Hr1G104550.10	Barley	cytosol, nucleus, plastid	29.93	11.43

Protein Annotations

Gene3D:2.130.10.30	MapMan:26.1.3.1	EMBL:AK356983	EMBL:AK365327	UniProt:F2CZC7	GO:GO:0003674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009628	GO:GO:0009881	GO:GO:0009987	GO:GO:0010224	GO:GO:0038023	GO:GO:0042803
EnsemblPlantsGene:HORVU2Hr1G076180	EnsemblPlants:HORVU2Hr1G076180.1	InterPro:IPR000408	InterPro:IPR009091	PFAM:PF00415	PRINTS:PR00633
ScanProsite:PS00626	PFscan:PS50012	PANTHER:PTHR22870	PANTHER:PTHR22870:SF317	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens
SUPFAM:SSF50985	UniParc:UPI00020054C3	InterPro:UVR8	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CZC7]

Coordinates

chrchr2H:+:549093353..549099558

Molecular Weight (calculated)

46742.6 Da

IEP (calculated)

5.382

GRAVY (calculated)

-0.267

Length

441 amino acids

Sequence
(BLAST)

001: MDAALSAVAD EAPPAVVLVS AGASHSVALL AGNVLCTWGR GEDGQLGHGD AEDRLVPTVI SGFDAPGITS VICGADHTTA YSEDEHQVYS WGWGDFGRLG
101: HGNSTDVFTP QPVKALQGIK IKQLACGDSH CLAVTMAGEV LSWGRNQNGQ LGLGTTEDSL LPQTIQAFEG ISVKMIAAGA EHTAAVTEDG DIYGWGWGRY
201: GNLGLGDRND RFVPEKVSSV EGDKMVLVAC GWRHTITVSS SGSLYTYGWS KYGQLGHGDF EDHLVPHKVE ALKDSSTSQI SGGWRHTMAL TSDGKLYGWG
301: WNKFGQVGAG DNADHCSPAQ VNFPEEQKVA QVACGWRHTL AFTEKKNVFA WGRGTSGQLG HGEIVDRNTP VIIDALSPDG PGCKKLESSA AIPFAAKIWV
401: SPSERYALVP DEKVAKPGDA TARGNGADAS VPENDVKRMR V

Best Arabidopsis Sequence Match ( AT5G63860.1 )
(BLAST)

001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI

Arabidopsis Description

UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.