Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G63860.1 | KRH14801 | AT2G32950.1 | 19165148 |
| AT5G63860.1 | KRH73341 | AT2G32950.1 | 19165148 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59606 | Soybean | cytosol | 86.39 | 66.82 |
| Solyc05g018620.2.1 | Tomato | cytosol | 51.78 | 57.0 |
| Bra024242.1-P | Field mustard | cytosol | 62.72 | 51.58 |
| KRH53944 | Soybean | plastid | 71.89 | 51.27 |
| Bra029198.1-P | Field mustard | cytosol | 61.83 | 50.73 |
| AT5G63860.1 | Thale cress | cytosol | 65.98 | 50.68 |
| Bra037755.1-P | Field mustard | cytosol | 62.13 | 50.48 |
| KRH63996 | Soybean | nucleus | 71.01 | 49.79 |
| CDY43762 | Canola | cytosol | 63.02 | 49.77 |
| CDY31347 | Canola | cytosol | 63.91 | 49.54 |
| VIT_07s0031g02560.t01 | Wine grape | cytosol | 64.79 | 49.21 |
| CDX84451 | Canola | cytosol | 64.79 | 49.1 |
| CDX81201 | Canola | cytosol | 63.91 | 49.09 |
| CDY60046 | Canola | cytosol | 64.79 | 48.88 |
| GSMUA_Achr6P17690_001 | Banana | cytosol | 62.43 | 48.06 |
| CDY39843 | Canola | cytosol | 57.1 | 47.77 |
| GSMUA_Achr3P19000_001 | Banana | nucleus | 62.13 | 46.77 |
| EES10837 | Sorghum | cytosol | 60.65 | 46.28 |
| Zm00001d003632_P003 | Maize | extracellular | 60.35 | 46.05 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 59.76 | 45.8 |
| TraesCS2D01G304900.2 | Wheat | cytosol | 59.47 | 45.37 |
| TraesCS2B01G323100.1 | Wheat | unclear | 59.17 | 45.25 |
| TraesCS6B01G180900.1 | Wheat | cytosol | 53.85 | 44.94 |
| TraesCS2A01G306400.3 | Wheat | cytosol | 58.88 | 44.92 |
| Os02t0554100-01 | Rice | cytosol, plasma membrane | 59.76 | 44.59 |
| TraesCS6D01G142500.1 | Wheat | golgi | 57.99 | 44.55 |
| Os04t0435700-01 | Rice | plasma membrane | 59.47 | 44.37 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 55.62 | 42.53 |
| TraesCS6A01G153100.1 | Wheat | golgi | 57.4 | 41.28 |
| KRH49501 | Soybean | cytosol | 10.06 | 19.65 |
| KRH63955 | Soybean | mitochondrion | 23.08 | 18.7 |
| KRH53977 | Soybean | cytosol, mitochondrion, nucleus | 17.46 | 18.44 |
| KRG93861 | Soybean | nucleus | 20.12 | 17.22 |
| KRH45102 | Soybean | cytosol, nucleus, peroxisome | 23.08 | 16.46 |
| KRH01383 | Soybean | cytosol | 23.08 | 16.46 |
| KRH46563 | Soybean | mitochondrion | 20.71 | 15.77 |
| KRH30228 | Soybean | cytosol | 18.64 | 15.48 |
| KRG97505 | Soybean | cytosol | 24.26 | 15.33 |
| KRH31377 | Soybean | cytosol | 23.37 | 14.88 |
| KRH08750 | Soybean | cytosol | 27.81 | 14.76 |
| KRH22127 | Soybean | cytosol | 21.01 | 14.64 |
| KRH27216 | Soybean | cytosol | 20.71 | 13.86 |
| KRH59226 | Soybean | cytosol | 21.89 | 13.86 |
| KRH74759 | Soybean | nucleus | 21.89 | 13.14 |
| KRH69375 | Soybean | nucleus | 22.19 | 12.69 |
| KRH40796 | Soybean | cytosol | 26.33 | 11.87 |
| KRH45886 | Soybean | nucleus | 30.18 | 10.71 |
| KRG99075 | Soybean | nucleus | 33.14 | 10.13 |
| KRG99112 | Soybean | cytosol | 29.29 | 10.1 |
| KRH73555 | Soybean | nucleus | 32.84 | 10.02 |
| KRH45937 | Soybean | nucleus | 32.84 | 10.01 |
| KRH14571 | Soybean | nucleus | 32.25 | 9.85 |
| KRH69117 | Soybean | cytosol | 30.47 | 9.55 |
| KRH31700 | Soybean | cytosol | 30.47 | 9.55 |
| KRH00393 | Soybean | cytosol | 30.18 | 9.54 |
| KRH70333 | Soybean | cytosol | 30.77 | 9.29 |
| KRG91629 | Soybean | cytosol | 29.59 | 9.11 |
| KRH35179 | Soybean | cytosol | 30.18 | 9.11 |
| KRG98005 | Soybean | cytosol | 28.7 | 9.07 |
| KRH08736 | Soybean | endoplasmic reticulum | 18.64 | 9.04 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 27.51 | 8.89 |
| KRH30884 | Soybean | cytosol | 27.81 | 8.75 |
| KRH30227 | Soybean | cytosol | 7.69 | 5.76 |
Protein Annotations
| Gene3D:2.130.10.30 | MapMan:35.1 | EMBL:ACUP02004743 | EnsemblPlantsGene:GLYMA_08G002200 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009881 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0038023 | GO:GO:0042803 | InterPro:IPR000408 |
| InterPro:IPR009091 | UniProt:K7L477 | EnsemblPlants:KRH40960 | ProteinID:KRH40960 | ProteinID:KRH40960.1 | PFAM:PF00415 |
| PFAM:PF13540 | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF317 |
| InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SUPFAM:SSF50985 | UniParc:UPI000296126B | InterPro:UVR8 | : |
Description
hypothetical protein
Coordinates
chr8:+:150445..156879
Molecular Weight (calculated)
36873.3 Da
IEP (calculated)
7.574
GRAVY (calculated)
-0.528
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKESPRRRI KNITGNVVCS WGRVEDGQLG HGDTDDRLLP TKLSALDGQD IICVTCGADH TMARSESGRD GRNQNGELGL GTTEDSLLPQ KIQKFEGIPI
101: KMVAAGAEHS VAITEDGNLY GWGWGRYGNL GLDGRKYVIL NLLGDKMAMV ACGWRHTRCV SSSGGLYTTG WGKYGQLGHG NFEDHLVPRK VQALSDKFIS
201: QDFFLVSGGW RHSMALTSNY CSPMQVNFPH DQKVRQISCG WRHTIAVTER ENVYSWGRGA NGQLWNGETI DPNVPMIIKA FSVDGSSGQH IESSKPYPTS
301: GKSLSSISKR YAIAPDETAS GSQPTNSEGG DRHDTSVP
101: KMVAAGAEHS VAITEDGNLY GWGWGRYGNL GLDGRKYVIL NLLGDKMAMV ACGWRHTRCV SSSGGLYTTG WGKYGQLGHG NFEDHLVPRK VQALSDKFIS
201: QDFFLVSGGW RHSMALTSNY CSPMQVNFPH DQKVRQISCG WRHTIAVTER ENVYSWGRGA NGQLWNGETI DPNVPMIIKA FSVDGSSGQH IESSKPYPTS
301: GKSLSSISKR YAIAPDETAS GSQPTNSEGG DRHDTSVP
001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI
Arabidopsis Description
UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.