CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97505	Soybean	cytosol	82.4	82.24
KRH31377	Soybean	cytosol	81.46	81.92
VIT_01s0137g00230.t01	Wine grape	cytosol	79.21	79.21
Solyc05g014030.2.1	Tomato	cytosol	75.47	75.61
PGSC0003DMT400027900	Potato	cytosol	75.28	75.42
CDY04192	Canola	cytosol	68.54	74.39
CDY39172	Canola	cytosol	68.54	74.39
AT3G26100.5	Thale cress	cytosol, plastid	73.22	73.5
CDX83586	Canola	cytosol, plastid	72.47	73.16
Bra017335.1-P	Field mustard	cytosol	72.66	73.07
Bra025182.1-P	Field mustard	cytosol	72.28	72.97
CDY13609	Canola	cytosol	72.28	72.97
GSMUA_AchrUn_...	Banana	cytosol, plastid	73.22	72.81
Os12t0284000-01	Rice	cytosol	72.47	72.47
CDX99731	Canola	cytosol, plastid	71.35	71.22
HORVU5Hr1G034530.6	Barley	cytosol	71.16	71.16
GSMUA_Achr9P02110_001	Banana	plastid	71.54	71.0
Bra036349.1-P	Field mustard	cytosol, plastid	71.91	69.95
CDY40988	Canola	cytosol, plastid	71.72	69.76
PGSC0003DMT400016865	Potato	cytosol, extracellular, plastid	21.35	65.9
TraesCS5D01G123500.1	Wheat	mitochondrion, plastid	25.66	61.44
KRH22127	Soybean	cytosol	24.34	26.8
KRH27216	Soybean	cytosol	24.53	25.94
KRG93861	Soybean	nucleus	17.6	23.8
KRH49501	Soybean	cytosol	7.3	22.54
KRH59606	Soybean	cytosol	18.16	22.2
KRH40960	Soybean	cytosol	13.86	21.89
KRH63955	Soybean	mitochondrion	16.48	21.1
KRH08750	Soybean	cytosol	24.34	20.41
KRH53977	Soybean	cytosol, mitochondrion, nucleus	11.98	20.0
KRH01383	Soybean	cytosol	17.6	19.83
KRH53944	Soybean	plastid	17.42	19.62
KRH63996	Soybean	nucleus	17.6	19.5
KRH45102	Soybean	cytosol, nucleus, peroxisome	17.23	19.41
KRH46563	Soybean	mitochondrion	15.73	18.92
KRH30228	Soybean	cytosol	14.04	18.43
KRH74759	Soybean	nucleus	16.29	15.45
KRH69375	Soybean	nucleus	16.1	14.55
KRH45886	Soybean	nucleus	23.22	13.03
KRG99075	Soybean	nucleus	25.47	12.3
KRH31700	Soybean	cytosol	24.53	12.15
KRH69117	Soybean	cytosol	24.53	12.15
KRH73555	Soybean	nucleus	24.72	11.91
KRH45937	Soybean	nucleus	24.72	11.9
KRH14571	Soybean	nucleus	24.53	11.83
KRH00393	Soybean	cytosol	23.6	11.79
KRG91629	Soybean	cytosol	24.16	11.75
KRG99112	Soybean	cytosol	21.54	11.73
KRH35179	Soybean	cytosol	24.34	11.61
KRG98005	Soybean	cytosol	23.03	11.5
KRH70333	Soybean	cytosol	23.78	11.34
KRH30884	Soybean	cytosol	22.66	11.27
KRH40796	Soybean	cytosol	14.98	10.67
KRH65503	Soybean	cytosol, mitochondrion, nucleus	19.29	9.85
KRH08736	Soybean	endoplasmic reticulum	10.3	7.89
KRH30227	Soybean	cytosol	3.37	3.99

Protein Annotations

EntrezGene:100787233	Gene3D:2.130.10.30	MapMan:35.1	EMBL:ACUP02003307	EnsemblPlantsGene:GLYMA_05G172400	InterPro:IPR000408
InterPro:IPR009091	UniProt:K7KQS2	ProteinID:KRH59224.1	ProteinID:KRH59225.1	EnsemblPlants:KRH59226	ProteinID:KRH59226
ProteinID:KRH59226.1	PFAM:PF00415	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PANTHER:PTHR22870
PANTHER:PTHR22870:SF24	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SUPFAM:SSF50985	UniParc:UPI000233A253	:

Description

hypothetical protein

Coordinates

chr5:+:36241411..36245575

Molecular Weight (calculated)

58535.6 Da

IEP (calculated)

6.454

GRAVY (calculated)

-0.240

Length

534 amino acids

Sequence
(BLAST)

001: MDATTSETPT IQYHNIPDQP ITTIVATQLP TFQPQQRHCF KDSSPGEFPL SDNPSIVLHV LTTCNLYAQD LAKLEATCSF FKRPANFDPD FDLSLSELAA
101: LDMCQKRAIF NPMTTEQRQH LKQRCGGSWK LVLRFLLAGE ACYRREKSQV IAGPGHSIAV TSKGVVYSFG SNSSGQLGHG TTEDGWQPRP IRALQGIRII
201: QATAATGRTM LISDSGQVYA FGKQYFCENE IGNEGSKMVT TPQLVESLKN IFVVQAAIGN YFTAVLSREG RVYTFSWGSD GKLCHQTDPN DVEPRPLLGA
301: LEHIPVVQIA AGFCYLLCLA CQPSGMSVYS VGCGMGGKLG HGTETDEKYP RLIEQFQLLN LQPMVIAAGS WHAAVVGQDG RVCTWGWGRH GCLGHGNEEC
401: ALVPKVVEEL KNVKAVHVAA GDYTTFVVSD SGDAYSFGYG ESGTLGHDPE NPEQEHMHAD VLTPKLVTSM KQNYERVIQI SLTNSVYWIA HTFALTESGK
501: LYAFGAGDKG QLGVELRPYQ TERRKPQRVD IDLG

Best Arabidopsis Sequence Match ( AT3G26100.2 )
(BLAST)

001: MDATSGTPSL QYINLPEQSV STTSPPVSPF QRPKRHCFGD TTPGEFPLAA NPSIVLHVLT ECRLDPRDLA NLEATCSFFS QPANFAPDIN LSLSELAALD
101: MCNKRVIFKP MNEEERQEMK RRCGGSWKLV LRFLLAGEAC CRREKSQAVA GPGHSVAVTS KGEVYTFGYN NSGQLGHGHT EDEARIQPVR SLQGVRIIQA
201: AAGAARTMLI SDDGKVYACG KESFGEAEYG GQGTKPVTTP QLVTSLKNIF VVQAAIGNYF TAVLSREGKV YTFSWGNDGR LGHQTEAADV EPRPLLGPLE
301: NVPVVQIAAG YCYLLALACQ PNGMSVYSVG CGLGGKLGHG SRTDEKYPRV IEQFQILNLQ PRVVAAGAWH AAVVGQDGRV CTWGWGRYGC LGHGNEECES
401: VPKVVEGLSH VKAVHVATGD YTTFVVSDDG DVYSFGCGES ASLGHHPSFD EQGNRHANVL SPTVVTSLKQ VNERMVQISL TNSIYWNAHT FALTESGKLF
501: AFGAGDQGQL GTELGKNQKE RCVPEKVDID LS

Arabidopsis Description

Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU80]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.