Factsheet for TraesCS2D01G241400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G254900.2	Wheat	cytosol	99.17	99.17
TraesCS2A01G236300.4	Wheat	cytosol	99.59	98.17
KXG35074	Sorghum	cytosol	89.05	89.23
Zm00001d019595_P001	Maize	cytosol	88.43	88.61
Zm00001d005395_P001	Maize	cytosol	86.57	86.75
GSMUA_Achr1P00100_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.62	74.39
GSMUA_Achr5P12060_001	Banana	mitochondrion	69.21	74.11
PGSC0003DMT400003817	Potato	cytosol	55.17	69.9
GSMUA_Achr2P10610_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.04	68.9
VIT_19s0014g03080.t01	Wine grape	cytosol	68.8	67.68
KRH22127	Soybean	cytosol	64.88	64.74
PGSC0003DMT400032346	Potato	plasma membrane	64.26	64.52
Solyc07g063300.2.1	Tomato	plasma membrane	64.26	63.99
CDX97668	Canola	cytosol	62.4	63.31
CDY56827	Canola	cytosol	61.98	62.89
Bra027244.1-P	Field mustard	cytosol	62.4	61.63
AT3G15430.2	Thale cress	cytosol	61.78	61.27
KRH27216	Soybean	cytosol	63.43	60.79
KRH49501	Soybean	cytosol	18.8	52.6
Bra021109.1-P	Field mustard	endoplasmic reticulum, extracellular	61.98	36.5
CDY20113	Canola	endoplasmic reticulum, extracellular	61.57	36.12
CDY21840	Canola	endoplasmic reticulum, extracellular	61.36	35.96
TraesCS5D01G123500.1	Wheat	mitochondrion, plastid	12.4	26.91
TraesCS2D01G304900.2	Wheat	cytosol	23.55	25.73
TraesCS6D01G142500.1	Wheat	golgi	22.52	24.77
TraesCS7D01G282600.1	Wheat	cytosol	19.01	24.4
TraesCS3D01G312300.1	Wheat	cytosol	19.21	22.85
TraesCS1D01G078800.1	Wheat	mitochondrion	18.59	21.48
TraesCS2D01G340500.1	Wheat	cytosol	18.8	20.78
TraesCS5D01G373300.1	Wheat	mitochondrion	17.56	19.41
TraesCS5D01G177900.1	Wheat	cytosol	19.21	19.38
TraesCS3D01G522600.2	Wheat	cytosol	24.17	13.46
TraesCS7D01G187100.3	Wheat	cytosol	27.07	12.83
TraesCS1D01G240700.1	Wheat	cytosol	28.31	12.53
TraesCS2D01G589800.1	Wheat	cytosol	27.48	12.43
TraesCS3D01G489600.1	Wheat	cytosol	27.48	12.21
TraesCS1D01G019900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	22.93	12.21
TraesCS1D01G372300.1	Wheat	cytosol	25.41	11.68
TraesCS2D01G457000.1	Wheat	cytosol, nucleus, peroxisome	23.76	11.24
TraesCS6D01G241800.1	Wheat	cytosol	24.38	11.12

Protein Annotations

EnsemblPlants:TraesCS2D01G241400.2	EnsemblPlantsGene:TraesCS2D01G241400	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF302	PFAM:PF00415	PFAM:PF13540	PFscan:PS50012
PRINTS:PR00633	ScanProsite:PS00626	SUPFAM:SSF50985	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:+:262448278..262458898

Molecular Weight (calculated)

51347.2 Da

IEP (calculated)

7.894

GRAVY (calculated)

0.014

Length

484 amino acids

Sequence
(BLAST)

001: MAGEKSPRAF SMEELPGHLI GEVLSSGRLA AGDLARLEGT CRALRPLAEQ AASRLCAARM ACSVIGPAAR GELLARCGGS WKKVLRFLQS VEQSFDTVHT
101: SSGNMQVATG RYHTLLVHDS SVYSCGSSLC GVLGHGPDTT QCVAFSRVSF PSLARVVNIS AFHNHAAFVT ESGEVFTCGD NSSACCGHGD VGRTIFRPTQ
201: ILALKGISCK QVATGLSFTV ILTRKGLVYT CGSNTHGQLG HGDTTDRAAP KIVELFKGPS PVVQVAAGAS YTFAVTDDGT VYSFGSCTNF CLGHGDQHNE
301: LLPRAIQSFK RRNILVVRVS AGDEHAVALD ALGYVYTWGR GYCGALGHGD ENDKTSPELI VGLKGQVAVQ VCARKRKTFV LTDEGSVFAF GWMGFGSLGF
401: PDRGSSDKVM QPRVLDSLSG HYVSQISTGL YHTVAVTNKG IVFGFGDNER AQLGQEFIRG CLKPTEIMFD KSSIEDIAIA APSG

Best Arabidopsis Sequence Match ( AT3G15430.6 )
(BLAST)

001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC

Arabidopsis Description

MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.