Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG35074 Sorghum cytosol 97.1 97.1
Zm00001d019595_P001 Maize cytosol 96.07 96.07
TraesCS2D01G241400.2 Wheat cytosol 86.75 86.57
TraesCS2B01G254900.2 Wheat cytosol 86.34 86.16
TraesCS2A01G236300.4 Wheat cytosol 86.54 85.13
GSMUA_Achr1P00100_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 77.23 75.81
GSMUA_Achr5P12060_001 Banana mitochondrion 70.39 75.22
GSMUA_Achr2P10610_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 72.05 70.73
PGSC0003DMT400003817 Potato cytosol 55.28 69.9
VIT_19s0014g03080.t01 Wine grape cytosol 69.15 67.89
KRH22127 Soybean cytosol 65.42 65.15
PGSC0003DMT400032346 Potato plasma membrane 63.98 64.11
Solyc07g063300.2.1 Tomato plasma membrane 63.98 63.58
CDX97668 Canola cytosol 62.53 63.31
CDY56827 Canola cytosol 62.11 62.89
KRH27216 Soybean cytosol 64.6 61.78
Bra027244.1-P Field mustard cytosol 62.53 61.63
AT3G15430.2 Thale cress cytosol 61.7 61.07
KRH49501 Soybean cytosol 19.25 53.76
Bra021109.1-P Field mustard endoplasmic reticulum, extracellular 61.9 36.37
CDY20113 Canola endoplasmic reticulum, extracellular 61.49 36.0
CDY21840 Canola endoplasmic reticulum, extracellular 61.28 35.84
Zm00001d003632_P003 Maize extracellular 23.81 25.96
Zm00001d050380_P004 Maize cytosol 19.25 23.91
Zm00001d043280_P001 Maize cytosol 19.25 22.79
Zm00001d032229_P002 Maize mitochondrion 19.67 22.67
Zm00001d050985_P002 Maize cytosol 23.6 20.5
Zm00001d033172_P001 Maize cytosol 18.84 18.96
Zm00001d021372_P001 Maize mitochondrion 16.56 18.52
Zm00001d052624_P007 Maize plastid 16.77 17.69
Zm00001d011805_P001 Maize cytosol 24.64 13.05
Zm00001d035723_P001 Maize cytosol, mitochondrion, nucleus, plastid 24.43 12.87
Zm00001d042074_P001 Maize cytosol 28.78 12.74
Zm00001d011851_P001 Maize cytosol 28.78 12.43
Zm00001d017641_P004 Maize cytosol 22.15 12.43
Zm00001d002876_P001 Maize mitochondrion 27.12 12.05
Zm00001d038882_P002 Maize cytosol 25.88 11.85
Zm00001d011660_P003 Maize cytosol 24.22 11.07
Zm00001d002544_P004 Maize cytosol, endoplasmic reticulum, nucleus 24.43 10.63
Zm00001d051479_P005 Maize nucleus 23.6 10.59
Zm00001d006773_P001 Maize cytosol 7.66 9.18
Protein Annotations
EnsemblPlants:Zm00001d005395_P001EnsemblPlants:Zm00001d005395_T001EnsemblPlantsGene:Zm00001d005395EntrezGene:103647289Gene3D:2.130.10.30InterPro:IPR000408
InterPro:IPR009091InterPro:RCC1/BLIP-IIInterPro:Reg_chr_condensPANTHER:PTHR22870PANTHER:PTHR22870:SF302PFAM:PF00415
PFAM:PF13540PFscan:PS50012PRINTS:PR00633ProteinID:ONM21003.1ProteinID:ONM21011.1ScanProsite:PS00626
SEG:segSUPFAM:SSF50985UniParc:UPI0004DE8F39UniProt:A0A1D6EMA5MapMan:35.1:
Description
Regulator of chromosome condensation (RCC1) family protein
Coordinates
chr2:+:172237665..172248166
Molecular Weight (calculated)
51232.1 Da
IEP (calculated)
7.069
GRAVY (calculated)
-0.010
Length
483 amino acids
Sequence
(BLAST)
001: MAGEKAPRAF PIEELPGHLI GEVLTSGGLA AADLARLEAT CRALRPLAEY AASKLCAARA AFAAMGPAAR GGLLERCGGS WKKVLRFLQS VEQSSGTVET
101: TSGSMQVATG RYHTLLVHDS SVYSCGSSLC GVLGHGPDTT QCAAFSRVSF PSLSCVINIS ASHNHAAFVL ESGEVFTCGD NSSLCCGHGE VGRTIFRPMQ
201: VEALKGIPCK QVATGLSFTV ILTRDGQVYT CGSNTHGQLG HGDTIDRATP KLIELFEGST PVVQIAAGAS YTFAVTDDGT VHSFGSCTNF CLGHGDQHDE
301: LLPRAIQSFK WRNIHVVRVS AGDEHAVALD ALGYVYTWGK GYCGALGHGD ENDKTSPELI SSLKGQVAVQ VCARKRKTFV LTDKGSVVAF GWMGFGSLGF
401: PDRGPLDKVM RPRALESLQD HYVSQISTGL YHTVAVTSKG IVFGFGDNER AQLGQEYIRG CLKPTEIMFQ KSMEDIPIAA PSG
Best Arabidopsis Sequence Match ( AT3G15430.6 )
(BLAST)
001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
Arabidopsis Description
MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.