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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 6
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
 mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97183 Sorghum mitochondrion 94.91 94.91
HORVU5Hr1G089510.1 Barley cytosol 72.69 87.22
Os09t0560450-01 Rice mitochondrion 87.73 86.73
TraesCS5D01G373300.1 Wheat mitochondrion 84.72 83.56
TraesCS5B01G366300.1 Wheat mitochondrion 84.49 83.33
TraesCS5A01G364400.2 Wheat mitochondrion 83.8 82.65
GSMUA_Achr8P06920_001 Banana cytosol 57.41 75.84
Solyc07g042980.2.1 Tomato cytosol 36.11 64.2
Bra013002.1-P Field mustard mitochondrion 64.58 62.98
CDY02190 Canola mitochondrion 64.58 62.98
CDY51633 Canola mitochondrion 63.89 62.16
KRH46563 Soybean mitochondrion 63.19 61.49
VIT_03s0017g02290.t01 Wine grape endoplasmic reticulum, golgi 46.53 61.09
AT5G60870.2 Thale cress mitochondrion 62.04 59.29
Os04t0226400-01 Rice plastid 28.01 55.76
Solyc07g042970.2.1 Tomato mitochondrion 28.01 50.21
Zm00001d050380_P004 Maize cytosol 20.6 22.88
Zm00001d003632_P003 Maize extracellular 22.92 22.35
Zm00001d032229_P002 Maize mitochondrion 20.37 21.0
Zm00001d043280_P001 Maize cytosol 19.44 20.59
Zm00001d033172_P001 Maize cytosol 19.44 17.5
Zm00001d005395_P001 Maize cytosol 18.52 16.56
Zm00001d019595_P001 Maize cytosol 18.29 16.36
Zm00001d052624_P007 Maize plastid 17.13 16.16
Zm00001d050985_P002 Maize cytosol 19.68 15.29
Zm00001d011805_P001 Maize cytosol 26.62 12.61
Zm00001d035723_P001 Maize cytosol, mitochondrion, nucleus, plastid 26.62 12.54
Zm00001d042074_P001 Maize cytosol 30.56 12.1
Zm00001d011851_P001 Maize cytosol 30.56 11.81
Zm00001d002876_P001 Maize mitochondrion 29.4 11.68
Zm00001d017641_P004 Maize cytosol 21.99 11.03
Zm00001d011660_P003 Maize cytosol 26.85 10.97
Zm00001d038882_P002 Maize cytosol 26.62 10.9
Zm00001d002544_P004 Maize cytosol, endoplasmic reticulum, nucleus 26.62 10.36
Zm00001d006773_P001 Maize cytosol 9.26 9.93
Zm00001d051479_P005 Maize nucleus 23.84 9.57
Protein Annotations
MapMan:16.12.2.2.2Gene3D:2.130.10.30UniProt:B4FS31EMBL:BT039919ncoils:CoilGO:GO:0003674
GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009628GO:GO:0009881GO:GO:0009987GO:GO:0010224GO:GO:0038023GO:GO:0042803
InterPro:IPR000408InterPro:IPR009091ProteinID:ONM56980.1PFAM:PF00415PRINTS:PR00633ScanProsite:PS00626
PFscan:PS50012PANTHER:PTHR22870PANTHER:PTHR22870:SF317InterPro:RCC1/BLIP-IIInterPro:Reg_chr_condensSUPFAM:SSF50985
UniParc:UPI00017B7D9AInterPro:UVR8EnsemblPlantsGene:Zm00001d021372EnsemblPlants:Zm00001d021372_P001EnsemblPlants:Zm00001d021372_T001SEG:seg
Description
Regulator of chromosome condensation (RCC1) family protein
Coordinates
chr7:-:150158588..150167531
Molecular Weight (calculated)
45435.8 Da
IEP (calculated)
6.988
GRAVY (calculated)
-0.153
Length
432 amino acids
Sequence
(BLAST)
001: MFRRLLPHRR YISTSPASNS TPTLYSDGTI PFSILSWGRG ASGQLGGGKE ERRLYPSPVA HLLLPESDPR LAPTPGRLPS AEDTSGVEVG ISCGLFHSSL
101: LVEGGAWVWG KGDGGRLGLG DESSAFVPHS NPNLRDLRLL ALGGIHSAAL TTSGDVFTWG YGGFGALGHH VYHRELLPRQ VNGPWEGKIT HISTSGAHTA
201: AITDSGELYT WGRDEGDGRL GLGSGGGPGE AGSLSVPSKV NALPVPVAAV ACGGFFTMAL TSDGQLWSWG ANSNFELGRG SNFSDWRPQL VPSLKSTRVI
301: QVACGGYHSL ALTDEGKVLS WGHGGHGQLG HPTLQNHRVP LAIKALSDER IVHIACGGST SAAISEKGDL YMWGNARDCQ LGIPGLPEVQ PLPVKVIFLR
401: DDDEGLGPSR VISVAIGASH AMCLVSTQQT EK
Best Arabidopsis Sequence Match ( AT5G60870.1 )
(BLAST)
001: MAALSHRLRS FTRRFSSTRT TQRSGGGANT KVPILYTSPD IDSDPVTLQL FSWGRGASGQ LGGGIEEIRM YPSPVANLLF RSDQSFSLAQ TPGRIDADSS
101: SFRIGISCGL FHSGLTIDGD LWIWGKGDGG RLGFGQENSV FVPNLNPLFE EHSIRCIALG GLHSVALTHQ GDVFTWGYGG FGALGHKVYT RELVPRRVDD
201: SWDCKISAIA TSGTHTAAIT ESGELYMWGR EEGDGRLGLG PGRGPNEGGG LSVPSKVKAL TVPVASVSCG GFFTMALTKE GQLWNWGANS NYELGRGDNL
301: GGWEPMPVPS LEGVRITQIA CGGYHSLALT EEGKVLSWGH GGHGQLGSSS LRNQKVPTEI EALADKKIVF IASGGSSSAA ITDGGELWMW GNAKDFQLGV
401: PGLPEIQTTP VEVNFLTEED ECQPHKVISI SIGASHALCL VSRSP
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:TAIR;Acc:AT5G60870]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.