Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G089510.1 | Barley | cytosol | 56.22 | 33.89 |
| GSMUA_Achr8P06920_001 | Banana | cytosol | 47.0 | 31.19 |
| Os09t0560450-01 | Rice | mitochondrion | 60.83 | 30.21 |
| EER97183 | Sorghum | mitochondrion | 56.68 | 28.47 |
| TraesCS5D01G373300.1 | Wheat | mitochondrion | 57.14 | 28.31 |
| TraesCS5B01G366300.1 | Wheat | mitochondrion | 57.14 | 28.31 |
| Zm00001d021372_P001 | Maize | mitochondrion | 55.76 | 28.01 |
| TraesCS5A01G364400.2 | Wheat | mitochondrion | 56.22 | 27.85 |
| Solyc07g042970.2.1 | Tomato | mitochondrion | 28.11 | 25.31 |
| VIT_03s0017g02290.t01 | Wine grape | endoplasmic reticulum, golgi | 35.48 | 23.4 |
| KRH46563 | Soybean | mitochondrion | 47.0 | 22.97 |
| Bra013002.1-P | Field mustard | mitochondrion | 43.78 | 21.44 |
| CDY02190 | Canola | mitochondrion | 43.78 | 21.44 |
| CDY51633 | Canola | mitochondrion | 43.78 | 21.4 |
| AT5G60870.2 | Thale cress | mitochondrion | 43.32 | 20.8 |
| Solyc07g042980.2.1 | Tomato | cytosol | 16.13 | 14.4 |
| Os04t0435700-01 | Rice | plasma membrane | 25.35 | 12.14 |
| Os03t0599600-01 | Rice | mitochondrion | 10.6 | 12.11 |
| Os02t0554100-01 | Rice | cytosol, plasma membrane | 23.96 | 11.48 |
| Os11t0545800-01 | Rice | mitochondrion | 18.89 | 9.65 |
| Os01t0777800-01 | Rice | cytosol | 16.13 | 8.73 |
| Os08t0430700-02 | Rice | cytosol | 15.67 | 8.61 |
| Os01t0964800-01 | Rice | mitochondrion | 22.12 | 8.29 |
| Os12t0284000-01 | Rice | cytosol | 17.05 | 6.93 |
| Os02t0597000-01 | Rice | cytosol | 17.05 | 6.89 |
| Os05t0106700-00 | Rice | mitochondrion | 23.96 | 5.53 |
| Os04t0686200-01 | Rice | plasma membrane | 25.81 | 5.3 |
| Os05t0384800-01 | Rice | cytosol | 26.27 | 5.25 |
| Os01t0700200-01 | Rice | cytosol | 24.42 | 5.08 |
| Os01t0952300-00 | Rice | cytosol | 26.73 | 5.07 |
| Os05t0545200-00 | Rice | cytosol | 23.04 | 4.93 |
| Os04t0583700-00 | Rice | cytosol | 22.12 | 4.64 |
| Os02t0684900-01 | Rice | cytosol | 2.3 | 1.16 |
| Os08t0430600-01 | Rice | plastid | 0.46 | 0.63 |
| Os09t0560500-01 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0226400-01 | EnsemblPlantsGene:Os04g0226400 | Gene3D:2.130.10.30 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR000408 | InterPro:IPR009091 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | PANTHER:PTHR31485 | PANTHER:PTHR31485:SF3 |
| PFAM:PF00415 | PFscan:PS50012 | ProteinID:BAH92531.1 | ProteinID:BAS88203.1 | SEG:seg | SUPFAM:SSF50985 |
| UniParc:UPI0001B6674D | UniProt:C7J118 | MapMan:35.1 | : | : | : |
Description
Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein. (Os04t0226400-01);Regulator of chromosome condensation, RCC1 domain containing protein. (Os04t0226400-02);Similar to cDNA clone:J013044J21, full insert sequence. (Os04t0226400-03)
Coordinates
chr4:+:8453829..8461439
Molecular Weight (calculated)
23386.5 Da
IEP (calculated)
8.772
GRAVY (calculated)
-0.491
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: SLSSLPPPLP PPPPRAAAST PSCRLGLGDE SSAFVPRHNP NLSELRVLAL GGTHSAALTA SGEVFTWGYG GFGALGHYVY HRELLPRKVN GPWEGKISHI
101: ATRGAHTAAI TDSGELYNWG CDEGDRRLGL GSRGGPGAAG SLSVPSKPPW DLEIGDAFII HYTYRCDYDK GKLTHGKVAE SRFDKRSYDS KPPPKNLPLP
201: QNGLPQSVRE REAYFVF
101: ATRGAHTAAI TDSGELYNWG CDEGDRRLGL GSRGGPGAAG SLSVPSKPPW DLEIGDAFII HYTYRCDYDK GKLTHGKVAE SRFDKRSYDS KPPPKNLPLP
201: QNGLPQSVRE REAYFVF
001: MAALSHRLRS FTRRFSSTRT TQRSGGGANT KVPILYTSPD IDSDPVTLQL FSWGRGASGQ LGGGIEEIRM YPSPVANLLF RSDQSFSLAQ TPGRIDADSS
101: SFRIGISCGL FHSGLTIDGD LWIWGKGDGG RLGFGQENSV FVPNLNPLFE EHSIRCIALG GLHSVALTHQ GDVFTWGYGG FGALGHKVYT RELVPRRVDD
201: SWDCKISAIA TSGTHTAAIT ESGELYMWGR EEGDGRLGLG PGRGPNEGGG LSVPSKVKAL TVPVASVSCG GFFTMALTKE GQLWNWGANS NYELGRGDNL
301: GGWEPMPVPS LEGVRITQIA CGGYHSLALT EEGKVLSWGH GGHGQLGSSS LRNQKVPTEI EALADKKIVF IASGGSSSAA ITGIFSYRYV HLT
101: SFRIGISCGL FHSGLTIDGD LWIWGKGDGG RLGFGQENSV FVPNLNPLFE EHSIRCIALG GLHSVALTHQ GDVFTWGYGG FGALGHKVYT RELVPRRVDD
201: SWDCKISAIA TSGTHTAAIT ESGELYMWGR EEGDGRLGLG PGRGPNEGGG LSVPSKVKAL TVPVASVSCG GFFTMALTKE GQLWNWGANS NYELGRGDNL
301: GGWEPMPVPS LEGVRITQIA CGGYHSLALT EEGKVLSWGH GGHGQLGSSS LRNQKVPTEI EALADKKIVF IASGGSSSAA ITGIFSYRYV HLT
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:TAIR;Acc:AT5G60870]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.