Factsheet for Os01t0700200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01332	Sorghum	cytosol	79.41	78.5
Zm00001d011660_P003	Maize	cytosol	78.54	77.58
Os05t0545200-00	Rice	cytosol	67.53	69.53
CDY66504	Canola	cytosol	47.61	60.24
VIT_05s0049g01140.t01	Wine grape	cytosol	56.13	55.23
Os01t0964800-01	Rice	mitochondrion	30.36	54.75
CDX85076	Canola	cytosol	52.59	52.89
Solyc03g005590.1.1	Tomato	cytosol, plastid	53.93	52.57
PGSC0003DMT400034994	Potato	cytosol	51.92	52.37
CDY12764	Canola	cytosol	52.2	52.0
AT3G23270.2	Thale cress	cytosol	52.39	51.9
Bra023740.1-P	Field mustard	cytosol	52.87	51.78
KRH69117	Soybean	cytosol	52.97	51.3
KRH31700	Soybean	cytosol	52.39	50.74
KRH00393	Soybean	cytosol	51.92	50.7
KRH40796	Soybean	cytosol	35.73	49.73
CDX77534	Canola	cytosol	52.49	49.32
AT4G14368.1	Thale cress	cytosol	52.01	49.1
CDY49416	Canola	cytosol	51.92	48.44
Os04t0686200-01	Rice	plasma membrane	45.31	44.75
Os05t0106700-00	Rice	mitochondrion	39.18	43.51
Os05t0384800-01	Rice	cytosol	43.87	42.17
Bra014931.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	50.57	41.57
Os01t0952300-00	Rice	cytosol	43.3	39.55
KRH65503	Soybean	cytosol, mitochondrion, nucleus	39.37	39.29
Os04t0583700-00	Rice	cytosol	31.13	31.43
Os04t0435700-01	Rice	plasma membrane	13.51	31.13
Os02t0554100-01	Rice	cytosol, plasma membrane	13.41	30.91
Os11t0545800-01	Rice	mitochondrion	12.36	30.35
Os01t0777800-01	Rice	cytosol	10.92	28.43
Os09t0560450-01	Rice	mitochondrion	11.21	26.77
Os08t0430700-02	Rice	cytosol	9.58	25.32
Os03t0599600-01	Rice	mitochondrion	4.5	24.74
Os04t0226400-01	Rice	plastid	5.08	24.42
Os12t0284000-01	Rice	cytosol	12.26	23.97
Os02t0684900-01	Rice	cytosol	9.58	23.2
Os02t0597000-01	Rice	cytosol	11.21	21.79
Os08t0430600-01	Rice	plastid	1.82	11.95
Os09t0560500-01	Rice	mitochondrion, plastid	1.63	8.17

Protein Annotations

Gene3D:2.130.10.30	Gene3D:2.30.29.30	Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:4326924	EMBL:AK100961
ProteinID:BAD81868.1	ProteinID:BAD82210.1	ProteinID:BAF05898.1	ProteinID:BAS73886.1	InterPro:Brevis_radix_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR000408	InterPro:IPR009091	InterPro:IPR011993
InterPro:IPR013083	InterPro:IPR013591	InterPro:IPR017455	EnsemblPlantsGene:Os01g0700200	EnsemblPlants:Os01t0700200-01	PFAM:PF00415
PFAM:PF01363	PFAM:PF08381	InterPro:PH-like_dom_sf	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012
PFscan:PS50178	PFscan:PS51514	PANTHER:PTHR22870	PANTHER:PTHR22870:SF87	UniProt:Q5N8I7	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	SMART:SM00064	SUPFAM:SSF50729	SUPFAM:SSF50985	SUPFAM:SSF57903	UniParc:UPI000049E8D9
RefSeq:XP_015619411.1	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

OsSTA28Similar to Chromosome condensation regulator protein (Fragment). (Os01t0700200-01)

Coordinates

chr1:+:28978119..28983863

Molecular Weight (calculated)

115010.0 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.448

Length

1044 amino acids

Sequence
(BLAST)

0001: MTPDETALIT LKKGTKLIKY SRRGKPKIRA FRLSSDETSL IWFSHKKEKF LRLSSVTKII PGQRTAVFGR FLHPEKDYLS FSLIFKNGQR SLDLVCKDQA
0101: EVEVWFSALE GLISSFRKKS LINEHKDRVS FSEEVTYYQD RHSYDSTLDI ASNISRSFNS AGYCGTNSFS FRKSDVGFDR LNMIRTSAAD SSRVSISSAL
0201: SSYSQGSGTD DIESLGDVYV WGEVWTDVTP SDGHTSSSCS KVDVLIPKPL ESDVVLDVNQ IACGTRHVAL TTRQGEVFTW GEEFGGRLGH GTDADISRPK
0301: LVESLSLTVV DLISCGEFHT CAVTTSGDLF NWGDGSYNVG LLGCGTEVSY WLPKKVSGPL EGLQVLSVAC GSWHSALTTS SGKLYTFGDG TFGVLGHGDR
0401: ETLAYPKEVE ALSGFKTIKV ACGIWHSAAI VEVTNQTGAN VMSKKLYTWG DGDKNRLGHG DKEPRLVPKC VQALLEYNFH QLACGHNMTV ALATSGRVFT
0501: MGSSSNGQLG NPKSDGKQPC LVQDRLASEL VEEISCGASH VTVLTSRSEV YTWGMGANGR LGHGDLKDRK KPCLVEALKD RHVKSISCGS NFTTCICIHK
0601: WVSGADQSVC TGCRQAFGFT RKRHDCYNCG LVHCHACSSR KVLKAALAPT PGKPHRVCDS CFLKLKAAET GSNNSNRRNA VTRRSIDGRE KLERPEIRPS
0701: RTTAPAESVK YTEVKAARND MRASQISSLL QFKDLSFSAL QPTAMSPAVT MSPAVPALST PSPYTKKTKS PAPAIPQFPK TDIDNLQKSN ELLNQEMLKL
0801: QSQVDSLKQK CEAQHEQLQI SDKKTKTVVS MATEEYTRCS AVVEFVKFLD NELNGIVHEL PSDAAESLKA LQNQVQALLR EQRSHPSELL NPMDHDGIQL
0901: SSGGNALHDF SNHRSGSTRY LFMSQDASSA SGSAISLTSE PPSHRGMEHH AKVPNDFVPK HDTHGEVQLI EQFEPGVYVT LIQLKDGSKV FKRVRFSKKK
1001: FAENQAEEWW RENQERVFKK YSHPTVPQTT STKTGSSNEE EHHS

Best Arabidopsis Sequence Match ( AT4G14368.4 )
(BLAST)

0001: MKTDGMADPS SYVNHDRDID QALVSLKKGT QLLKYSRKGR PKFRSFRLSP DETTLFWLSH GEEKGLKLAT VSRILPGQRT AVFRRYLRPE KDYLSFSLIY
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S

Arabidopsis Description

Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:F4JVE8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.