Factsheet for Os09t0560450-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G089510.1	Barley	cytosol	75.51	91.67
TraesCS5D01G373300.1	Wheat	mitochondrion	88.79	88.58
EER97183	Sorghum	mitochondrion	87.41	88.43
TraesCS5B01G366300.1	Wheat	mitochondrion	88.56	88.36
Zm00001d021372_P001	Maize	mitochondrion	86.73	87.73
TraesCS5A01G364400.2	Wheat	mitochondrion	87.64	87.44
GSMUA_Achr8P06920_001	Banana	cytosol	56.98	76.15
Solyc07g042980.2.1	Tomato	cytosol	36.16	65.02
Bra013002.1-P	Field mustard	mitochondrion	64.53	63.66
CDY02190	Canola	mitochondrion	64.53	63.66
CDY51633	Canola	mitochondrion	63.84	62.84
KRH46563	Soybean	mitochondrion	62.7	61.71
VIT_03s0017g02290.t01	Wine grape	endoplasmic reticulum, golgi	46.0	61.09
Os04t0226400-01	Rice	plastid	30.21	60.83
AT5G60870.2	Thale cress	mitochondrion	61.78	59.73
Solyc07g042970.2.1	Tomato	mitochondrion	29.06	52.7
Os08t0430700-02	Rice	cytosol	21.97	24.3
Os02t0554100-01	Rice	cytosol, plasma membrane	24.71	23.84
Os04t0435700-01	Rice	plasma membrane	24.71	23.84
Os11t0545800-01	Rice	mitochondrion	20.14	20.71
Os01t0777800-01	Rice	cytosol	18.76	20.45
Os01t0964800-01	Rice	mitochondrion	26.09	19.69
Os03t0599600-01	Rice	mitochondrion	8.47	19.47
Os02t0597000-01	Rice	cytosol	19.68	16.01
Os12t0284000-01	Rice	cytosol	18.54	15.17
Os05t0106700-00	Rice	mitochondrion	27.0	12.55
Os04t0686200-01	Rice	plasma membrane	29.52	12.2
Os05t0384800-01	Rice	cytosol	29.98	12.06
Os01t0952300-00	Rice	cytosol	30.21	11.55
Os04t0583700-00	Rice	cytosol	27.0	11.41
Os01t0700200-01	Rice	cytosol	26.77	11.21
Os05t0545200-00	Rice	cytosol	24.94	10.75
Os09t0560500-01	Rice	mitochondrion, plastid	1.37	2.88
Os08t0430600-01	Rice	plastid	0.69	1.89
Os02t0684900-01	Rice	cytosol	1.6	1.62

Protein Annotations

MapMan:16.12.2.2.2	Gene3D:2.130.10.30	EntrezGene:9267369	UniProt:A0A0P0XQB6	ProteinID:BAT09398.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004150	GO:GO:0006760	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016829	GO:GO:0046654	GO:GO:0046656	GO:GO:0102083	InterPro:IPR000408
InterPro:IPR009091	EnsemblPlantsGene:Os09g0560450	EnsemblPlants:Os09t0560450-01	PFAM:PF00415	PRINTS:PR00633	ScanProsite:PS00626
PFscan:PS50012	PANTHER:PTHR22870	PANTHER:PTHR22870:SF303	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SUPFAM:SSF50985
UniParc:UPI0001C7A7AD	RefSeq:XP_015611957.1	SEG:seg	:	:	:

Description

Similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II. (Os09t0560450-01)

Coordinates

chr9:+:22269102..22272675

Molecular Weight (calculated)

45399.8 Da

IEP (calculated)

7.090

GRAVY (calculated)

-0.055

Length

437 amino acids

Sequence
(BLAST)

001: MFRRLLLPLR RCFSTSTSSS ATPTLYSSGT TPVSILSWGR GASGQLGGGK EERRLYPSPV AHLSLPDPAP VLSPTPGRLP DAAAAGTAAG GVEVGISCGL
101: FHSAVVVDGG AWVWGKGDGG RLGLGDESSA FVPRHNPNLS ELRVLALGGI HSAALTASGE VFTWGYGGFG ALGHYVYHRE LLPRKVNGPW EGKISHIATS
201: GAHTAAITDS GELYTWGRDE GDGRLGLGSG GGPGEAGSLS VPSKVNALPV SVAAVACGGF FTMALTSDGQ LWSWGANSNF ELGRGSNSSD WRPQLIPSLK
301: NLHVIQVACG GYHSLALTDE GVVLSWGHGG HGQLGHPTLQ NHRVPLAIKA LSEERIVYIA CGGSTSAAIS EKGDLYMWGN ARDCQLGVPG LPEIQPLPVK
401: VNFLTDGDED LGPHRVISVA IGASHAMCLV SRQQNEK

Best Arabidopsis Sequence Match ( AT5G60870.1 )
(BLAST)

001: MAALSHRLRS FTRRFSSTRT TQRSGGGANT KVPILYTSPD IDSDPVTLQL FSWGRGASGQ LGGGIEEIRM YPSPVANLLF RSDQSFSLAQ TPGRIDADSS
101: SFRIGISCGL FHSGLTIDGD LWIWGKGDGG RLGFGQENSV FVPNLNPLFE EHSIRCIALG GLHSVALTHQ GDVFTWGYGG FGALGHKVYT RELVPRRVDD
201: SWDCKISAIA TSGTHTAAIT ESGELYMWGR EEGDGRLGLG PGRGPNEGGG LSVPSKVKAL TVPVASVSCG GFFTMALTKE GQLWNWGANS NYELGRGDNL
301: GGWEPMPVPS LEGVRITQIA CGGYHSLALT EEGKVLSWGH GGHGQLGSSS LRNQKVPTEI EALADKKIVF IASGGSSSAA ITDGGELWMW GNAKDFQLGV
401: PGLPEIQTTP VEVNFLTEED ECQPHKVISI SIGASHALCL VSRSP

Arabidopsis Description

Regulator of chromosome condensation (RCC1) family protein [Source:TAIR;Acc:AT5G60870]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.