Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01332 | Sorghum | cytosol | 94.13 | 94.22 |
| Os01t0700200-01 | Rice | cytosol | 77.58 | 78.54 |
| Zm00001d038882_P002 | Maize | cytosol | 67.55 | 67.68 |
| CDY66504 | Canola | cytosol | 45.22 | 57.94 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 56.39 | 56.17 |
| PGSC0003DMT400034994 | Potato | cytosol | 51.56 | 52.66 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 53.26 | 52.57 |
| KRH69117 | Soybean | cytosol | 53.36 | 52.32 |
| KRH00393 | Soybean | cytosol | 52.89 | 52.29 |
| CDY12764 | Canola | cytosol | 51.75 | 52.19 |
| KRH31700 | Soybean | cytosol | 52.89 | 51.86 |
| CDX85076 | Canola | cytosol | 50.71 | 51.64 |
| AT3G23270.2 | Thale cress | cytosol | 50.71 | 50.85 |
| KRH40796 | Soybean | cytosol | 36.05 | 50.8 |
| Bra023740.1-P | Field mustard | cytosol | 50.9 | 50.47 |
| CDY49416 | Canola | cytosol | 51.66 | 48.79 |
| AT4G14368.1 | Thale cress | cytosol | 50.52 | 48.28 |
| CDX77534 | Canola | cytosol | 50.71 | 48.24 |
| Zm00001d035723_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 38.51 | 44.38 |
| Zm00001d011805_P001 | Maize | cytosol | 38.22 | 44.3 |
| Zm00001d042074_P001 | Maize | cytosol | 44.47 | 43.08 |
| Zm00001d002876_P001 | Maize | mitochondrion | 44.28 | 43.05 |
| Zm00001d006773_P001 | Maize | cytosol | 16.18 | 42.43 |
| Zm00001d011851_P001 | Maize | cytosol | 43.99 | 41.59 |
| Bra014931.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 48.91 | 40.71 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 38.88 | 39.29 |
| Zm00001d017641_P004 | Maize | cytosol | 30.46 | 37.4 |
| Zm00001d051479_P005 | Maize | nucleus | 33.11 | 32.53 |
| Zm00001d002544_P004 | Maize | cytosol, endoplasmic reticulum, nucleus | 32.83 | 31.26 |
| Zm00001d003632_P003 | Maize | extracellular | 12.58 | 30.02 |
| Zm00001d021372_P001 | Maize | mitochondrion | 10.97 | 26.85 |
| Zm00001d043280_P001 | Maize | cytosol | 10.31 | 26.72 |
| Zm00001d050380_P004 | Maize | cytosol | 9.46 | 25.71 |
| Zm00001d033172_P001 | Maize | cytosol | 11.16 | 24.58 |
| Zm00001d019595_P001 | Maize | cytosol | 11.16 | 24.43 |
| Zm00001d032229_P002 | Maize | mitochondrion | 9.65 | 24.34 |
| Zm00001d005395_P001 | Maize | cytosol | 11.07 | 24.22 |
| Zm00001d052624_P007 | Maize | plastid | 10.41 | 24.02 |
| Zm00001d050985_P002 | Maize | cytosol | 11.83 | 22.48 |
Protein Annotations
| EntrezGene:100273718 | Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6G2V2 |
| ProteinID:AQK97693.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 |
| InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 |
| PFAM:PF16457 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50003 |
| PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF87 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI0008444AE6 |
| EnsemblPlantsGene:Zm00001d011660 | EnsemblPlants:Zm00001d011660_P003 | EnsemblPlants:Zm00001d011660_T003 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Putative regulator of chromosome condensation (RCC1) family protein
Coordinates
chr8:+:157761148..157769182
Molecular Weight (calculated)
115470.0 Da
IEP (calculated)
8.529
GRAVY (calculated)
-0.480
Length
1057 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTPDENALIT LKKGSKLIKY SRKGKPKIRS FRLSSDETAL IWYSHKKEKF LRLSSVSKVI PGQRTAVFRR FLRPEKDYLS FSLIYKNGQR SLDLVCKDQV
0101: EVEVWFSALE ALISSCHRNS SVDEHKDRVS FSDDVSYYRD GHPYDSTLDI ASSISRSFNT ADYCRGSSFS FRRSDAGSDR ANMIRTSGAD STRLSISSAP
0201: SSSSQGSGTD DIESLGDVYV WGEVWTDAAP SDGHTSSSCS KVDVLIPKPL ESDVVLDVNQ IVCGSRHVAL TTRQGEVFTW GEELGGRLGH GTDTDISRPK
0301: LVESLSVTIV DFISCGEFHT CAISASGDLF NWGDGSYRAG LLGYDTGASH WLPKRVSGPL EGLQVLSVAC GSWHSALITS TGRLYTFGDG KFGALGHGNR
0401: ESAAYPKEVE ALNGFRTVKV ACGVWHSAAI VEASVQTGMN VVSKKLYTWG DGDKNRLGQG DKEARLIPTC LQALLEHNFH QLGCGQNMTV ALATSGHVYT
0501: MGSSDNGQLG NPKSDGKHPC LVKDKLANEL VEEISCGAAH VAVLTSRSEV YTWGLGANGR LGHGDLNDKK TPTIVEALKD RHVKSISCGS NFTTCICIHR
0601: WVSGADQSVC TGCRQAFGFT RKRHNCYNCG LVHCHACSSR KVLKAALAPT PGKPHRVCDS CFLKLKNADT SSSNANRRNA ATRRSTDSRE KPEIRPPRLV
0701: ATPSAEPGKY MEVKASKSDM KPADSIMKAS QASALLQFKD LGFGAQFGGL QPMGMPPALA MSPAIPAFSL APPSPYTKKM KSPPTSAIPQ SSKVDVDHLQ
0801: KSNDLLNQEV LKLQSQASTV EDLKQKCEAQ HEQLQKSDKK AKSVASMATE ESSKRNAAVE FVKFLDNELK GIADKLPVDV ADSLKALQMR TQSLLREQSG
0901: HPLELVNPME RDHLHLSSGG SGRYDLVTHK SGGVGYLTMS QDGSSASGSA MSITSESPSH RFMENSSKAH GDFAPKQGTH GEVQLIEQFE PGVYVTLIQL
1001: KDGTKVFKRV RFSKRRFAEN QAEEWWRENQ ERVFKKYSHP THAPHGNTTS HEEEHHS
0101: EVEVWFSALE ALISSCHRNS SVDEHKDRVS FSDDVSYYRD GHPYDSTLDI ASSISRSFNT ADYCRGSSFS FRRSDAGSDR ANMIRTSGAD STRLSISSAP
0201: SSSSQGSGTD DIESLGDVYV WGEVWTDAAP SDGHTSSSCS KVDVLIPKPL ESDVVLDVNQ IVCGSRHVAL TTRQGEVFTW GEELGGRLGH GTDTDISRPK
0301: LVESLSVTIV DFISCGEFHT CAISASGDLF NWGDGSYRAG LLGYDTGASH WLPKRVSGPL EGLQVLSVAC GSWHSALITS TGRLYTFGDG KFGALGHGNR
0401: ESAAYPKEVE ALNGFRTVKV ACGVWHSAAI VEASVQTGMN VVSKKLYTWG DGDKNRLGQG DKEARLIPTC LQALLEHNFH QLGCGQNMTV ALATSGHVYT
0501: MGSSDNGQLG NPKSDGKHPC LVKDKLANEL VEEISCGAAH VAVLTSRSEV YTWGLGANGR LGHGDLNDKK TPTIVEALKD RHVKSISCGS NFTTCICIHR
0601: WVSGADQSVC TGCRQAFGFT RKRHNCYNCG LVHCHACSSR KVLKAALAPT PGKPHRVCDS CFLKLKNADT SSSNANRRNA ATRRSTDSRE KPEIRPPRLV
0701: ATPSAEPGKY MEVKASKSDM KPADSIMKAS QASALLQFKD LGFGAQFGGL QPMGMPPALA MSPAIPAFSL APPSPYTKKM KSPPTSAIPQ SSKVDVDHLQ
0801: KSNDLLNQEV LKLQSQASTV EDLKQKCEAQ HEQLQKSDKK AKSVASMATE ESSKRNAAVE FVKFLDNELK GIADKLPVDV ADSLKALQMR TQSLLREQSG
0901: HPLELVNPME RDHLHLSSGG SGRYDLVTHK SGGVGYLTMS QDGSSASGSA MSITSESPSH RFMENSSKAH GDFAPKQGTH GEVQLIEQFE PGVYVTLIQL
1001: KDGTKVFKRV RFSKRRFAEN QAEEWWRENQ ERVFKKYSHP THAPHGNTTS HEEEHHS
0001: MKTDGMADPS SYVNHDRDID QALVSLKKGT QLLKYSRKGR PKFRSFRLSP DETTLFWLSH GEEKGLKLAT VSRILPGQRT AVFRRYLRPE KDYLSFSLIY
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:F4JVE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.