Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 97.39 | 94.12 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 67.44 | 65.79 |
| CDY66504 | Canola | cytosol | 52.37 | 65.7 |
| AT3G23270.2 | Thale cress | cytosol | 61.55 | 60.44 |
| CDX85076 | Canola | cytosol | 60.58 | 60.4 |
| Bra023740.1-P | Field mustard | cytosol | 60.77 | 59.01 |
| CDY12764 | Canola | cytosol | 58.07 | 57.35 |
| KRH40796 | Soybean | cytosol | 41.35 | 57.07 |
| CDX77534 | Canola | cytosol | 60.97 | 56.8 |
| KRH00393 | Soybean | cytosol | 58.16 | 56.31 |
| KRH69117 | Soybean | cytosol | 57.87 | 55.57 |
| KRH31700 | Soybean | cytosol | 57.49 | 55.19 |
| AT4G14368.1 | Thale cress | cytosol | 58.65 | 54.88 |
| Os05t0545200-00 | Rice | cytosol | 52.66 | 53.75 |
| CDY49416 | Canola | cytosol | 57.58 | 53.26 |
| EES19890 | Sorghum | cytosol | 52.08 | 52.84 |
| TraesCS1B01G384600.1 | Wheat | cytosol | 53.04 | 52.34 |
| TraesCS1A01G366800.1 | Wheat | cytosol | 52.66 | 52.2 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 52.95 | 52.14 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 52.85 | 51.95 |
| Os01t0700200-01 | Rice | cytosol | 52.37 | 51.92 |
| EES01332 | Sorghum | cytosol | 52.85 | 51.8 |
| Zm00001d011660_P003 | Maize | cytosol | 52.66 | 51.56 |
| Zm00001d038882_P002 | Maize | cytosol | 52.46 | 51.47 |
| Bra014931.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 59.03 | 48.11 |
| PGSC0003DMT400002081 | Potato | cytosol | 52.17 | 47.96 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 45.7 | 45.22 |
| PGSC0003DMT400059356 | Potato | cytosol | 40.0 | 40.16 |
| PGSC0003DMT400001620 | Potato | cytosol | 13.62 | 35.25 |
| PGSC0003DMT400043094 | Potato | nucleus | 34.4 | 33.09 |
| PGSC0003DMT400045467 | Potato | cytosol | 11.59 | 30.23 |
| PGSC0003DMT400032945 | Potato | extracellular | 10.24 | 27.11 |
| PGSC0003DMT400003817 | Potato | cytosol | 9.66 | 26.18 |
| PGSC0003DMT400003726 | Potato | cytosol | 11.5 | 25.54 |
| PGSC0003DMT400016865 | Potato | cytosol, extracellular, plastid | 3.96 | 23.7 |
| PGSC0003DMT400032346 | Potato | plasma membrane | 10.72 | 23.03 |
| PGSC0003DMT400027900 | Potato | cytosol | 11.21 | 21.76 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 |
| InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | UniProt:M1B1M6 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | EnsemblPlantsGene:PGSC0003DMG400013453 | PGSC:PGSC0003DMG400013453 |
| EnsemblPlants:PGSC0003DMT400034994 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50003 |
| PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF87 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI00029622A3 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
Ran GTPase binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400013453]
Coordinates
chr3:-:644699..651207
Molecular Weight (calculated)
113145.0 Da
IEP (calculated)
8.643
GRAVY (calculated)
-0.485
Length
1035 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGTDETTLIW YSRGSERNLK LSAVSKIIPG QRTPVFKRFL RPEKEYLSFS LIYNNGERSL DLICKDKIEA EIWIAGLKNI ISAGQARSRR TRSDITDLQN
0101: STPCGASLDF SQTISRDWTS ADPYGYETSS NVRCSDVGSE RGNMQVRTSS DGFRISVSST PSCSSGGSGP DDIESLGDVY VWGEIWCDGA LKDGAGNPIP
0201: VKHDVLTPKP LESNVVLDVH QIACGVRHVA LVTRQGEVFT WGEESGGRLG HGVERDFSRP KLVEFLAVTN VDFVSCGEFH TCAVSTMGDL YTWGDGTHNA
0301: GLLGHGNDVS HWIPKRVSGP LEGLQVLSVA CGTWHSALAT ANGKLFTFGD GTYGALGHGN RVTVPYPKEV QSLNGLKTIK VACGVWHTAA IVEVTNHNCG
0401: NLPTRKLFTW GDGDKYRLGH GNKEAYMLPT CVSALIDYNF HQLACGHNIT VGLTTSGHVF IMGSNAYGQL GNPQADGKAP SLVQDRLVGE FVEEITCGSF
0501: HVAVLTSRSE VFTWGKGANG RLGHGDTEDR NSPTLIEALK DRHVKNIACG SNYTASICIH KWVSGADQSV CSGCRQAFGF TRKRHNCYNC GLVHCHACSS
0601: KKALKAALAP TPGKPHRVCD SCYMKLKKAS EGNSSLFVKK FNSSHRPIEN SKLDRGEAKI SRVLLSPTIE PIKYLEVKSM RPGIKSDNFS IVRASQVPSL
0701: LQLKDIAFPS SLSALQYALK PVVTAPSQLQ LQPQSQPQPP PPSSNSRPAS PYSRRPSPPR SPAPVFSRGV IDSLRKTNDV LHQEVAKLQN QIKSLKQKSD
0801: GQDAELRKLK ESSQESSRLV AERASKCNVA VETMKSITIQ LKGMTQELPP DISESPAIKS IHAQVESFLN TFGNQEDSSS LQPDTSYSHQ KPTHRNNISE
0901: SVIRNDHWDA AGIHDTSHSV DGTVRENHGQ STPRSFSGSP RAPREGQKEV IEQFEPGVYV TLLQLTNGTK IFKRVRFSKR RFAEQQAEEW WKENKDRLLK
1001: KYSPPKINVA STTTDSSPAS PASPAPPPQE NNEAS
0101: STPCGASLDF SQTISRDWTS ADPYGYETSS NVRCSDVGSE RGNMQVRTSS DGFRISVSST PSCSSGGSGP DDIESLGDVY VWGEIWCDGA LKDGAGNPIP
0201: VKHDVLTPKP LESNVVLDVH QIACGVRHVA LVTRQGEVFT WGEESGGRLG HGVERDFSRP KLVEFLAVTN VDFVSCGEFH TCAVSTMGDL YTWGDGTHNA
0301: GLLGHGNDVS HWIPKRVSGP LEGLQVLSVA CGTWHSALAT ANGKLFTFGD GTYGALGHGN RVTVPYPKEV QSLNGLKTIK VACGVWHTAA IVEVTNHNCG
0401: NLPTRKLFTW GDGDKYRLGH GNKEAYMLPT CVSALIDYNF HQLACGHNIT VGLTTSGHVF IMGSNAYGQL GNPQADGKAP SLVQDRLVGE FVEEITCGSF
0501: HVAVLTSRSE VFTWGKGANG RLGHGDTEDR NSPTLIEALK DRHVKNIACG SNYTASICIH KWVSGADQSV CSGCRQAFGF TRKRHNCYNC GLVHCHACSS
0601: KKALKAALAP TPGKPHRVCD SCYMKLKKAS EGNSSLFVKK FNSSHRPIEN SKLDRGEAKI SRVLLSPTIE PIKYLEVKSM RPGIKSDNFS IVRASQVPSL
0701: LQLKDIAFPS SLSALQYALK PVVTAPSQLQ LQPQSQPQPP PPSSNSRPAS PYSRRPSPPR SPAPVFSRGV IDSLRKTNDV LHQEVAKLQN QIKSLKQKSD
0801: GQDAELRKLK ESSQESSRLV AERASKCNVA VETMKSITIQ LKGMTQELPP DISESPAIKS IHAQVESFLN TFGNQEDSSS LQPDTSYSHQ KPTHRNNISE
0901: SVIRNDHWDA AGIHDTSHSV DGTVRENHGQ STPRSFSGSP RAPREGQKEV IEQFEPGVYV TLLQLTNGTK IFKRVRFSKR RFAEQQAEEW WKENKDRLLK
1001: KYSPPKINVA STTTDSSPAS PASPAPPPQE NNEAS
0001: MADPASCYIY HERDVDQALV VLKKGTQLLK YSRKGKPKFR AFRLSPDEKT LIWFSRGEEK GLKLFEVSRI VPGQRTAVFK RFLRPEKDHL SFSLLYNNRE
0101: RSLDLICKDK AETEVWFAAL KFLIEKSRNR RARSEIPEIH DSDTFSVGRQ SIDFVPSNIP RGRTSIDLGY QNNSDVGYER GNMLRPSTDG FRISVSSTPS
0201: CSSGGSGPDD IESLGDVYVW GEVWTEGILP DGTASNETVK TDVLTPRPLE SNVVLDVHQI VCGVRHVALV TRQGEVFTWG EEVGGRLGHG IQVDISRPKL
0301: VEFLALTNID FVACGEYHTC VVSTSGDLFS WGDGIHNVGL LGHGSDISHW IPKRVSGPLE GLQVLSVACG TWHSALATAN GKLFTFGDGA FGVLGHGNRE
0401: SVSYPKEVQS LNGLKTVKVA CSIWHTAAIV EVMGQTATSM SSRKLFTWGD GDKNRLGHGN KETYLLPTCV SSLIDYNFHK IACGHTFTVA LTTSGHVFTM
0501: GGTAHGQLGN SISDGKLPCL VQDRLVGEFV EEIACGAHHV AVLTSRSEVF TWGKGANGRL GHGDTEDKRT PTLVEALRDR HVKSLSCGSN FTSSICIHKW
0601: VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS
0701: KVLLSANKNS VMSSSRPGFT PESSNARASQ VPSLQQLKDI AFPSSLSAIQ NAFKPVVAPT TTPPRTLVIG PSSPSPPPPP RSSSPYARRP SPPRTSGFSR
0801: SVIDSLRKTN EVMNQEMTKL HSQVKNLKQR CNNQGTEIER FQKAAKDASE LAARQSSKHK AATEALKSVA EQLKELKEKL PPEVSESEAF ESINSQAEAY
0901: LNANKVSETS PLTTSGQEQE TYQKTEEQVP SNSSITETSS SSRAPSTEAS SSRISGKESK EQFEPGVYVT YEVDMNGNKI FRRVRFSKKR FDEHQAEDWW
1001: TKNKDRLLKC YSSNSSSSSS SSNPTASDSP VAPQPPSDPS VPEQSNEKEP DSET
0101: RSLDLICKDK AETEVWFAAL KFLIEKSRNR RARSEIPEIH DSDTFSVGRQ SIDFVPSNIP RGRTSIDLGY QNNSDVGYER GNMLRPSTDG FRISVSSTPS
0201: CSSGGSGPDD IESLGDVYVW GEVWTEGILP DGTASNETVK TDVLTPRPLE SNVVLDVHQI VCGVRHVALV TRQGEVFTWG EEVGGRLGHG IQVDISRPKL
0301: VEFLALTNID FVACGEYHTC VVSTSGDLFS WGDGIHNVGL LGHGSDISHW IPKRVSGPLE GLQVLSVACG TWHSALATAN GKLFTFGDGA FGVLGHGNRE
0401: SVSYPKEVQS LNGLKTVKVA CSIWHTAAIV EVMGQTATSM SSRKLFTWGD GDKNRLGHGN KETYLLPTCV SSLIDYNFHK IACGHTFTVA LTTSGHVFTM
0501: GGTAHGQLGN SISDGKLPCL VQDRLVGEFV EEIACGAHHV AVLTSRSEVF TWGKGANGRL GHGDTEDKRT PTLVEALRDR HVKSLSCGSN FTSSICIHKW
0601: VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS
0701: KVLLSANKNS VMSSSRPGFT PESSNARASQ VPSLQQLKDI AFPSSLSAIQ NAFKPVVAPT TTPPRTLVIG PSSPSPPPPP RSSSPYARRP SPPRTSGFSR
0801: SVIDSLRKTN EVMNQEMTKL HSQVKNLKQR CNNQGTEIER FQKAAKDASE LAARQSSKHK AATEALKSVA EQLKELKEKL PPEVSESEAF ESINSQAEAY
0901: LNANKVSETS PLTTSGQEQE TYQKTEEQVP SNSSITETSS SSRAPSTEAS SSRISGKESK EQFEPGVYVT YEVDMNGNKI FRRVRFSKKR FDEHQAEDWW
1001: TKNKDRLLKC YSSNSSSSSS SSNPTASDSP VAPQPPSDPS VPEQSNEKEP DSET
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.