Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G241400.2 | Wheat | cytosol | 99.17 | 99.17 |
TraesCS2A01G236300.4 | Wheat | cytosol | 98.76 | 97.35 |
KXG35074 | Sorghum | cytosol | 88.64 | 88.82 |
Zm00001d019595_P001 | Maize | cytosol | 88.02 | 88.2 |
Zm00001d005395_P001 | Maize | cytosol | 86.16 | 86.34 |
GSMUA_Achr1P00100_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.83 | 74.59 |
GSMUA_Achr5P12060_001 | Banana | mitochondrion | 69.63 | 74.56 |
PGSC0003DMT400003817 | Potato | cytosol | 54.75 | 69.37 |
GSMUA_Achr2P10610_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 70.04 | 68.9 |
VIT_19s0014g03080.t01 | Wine grape | cytosol | 68.18 | 67.07 |
KRH22127 | Soybean | cytosol | 64.88 | 64.74 |
PGSC0003DMT400032346 | Potato | plasma membrane | 63.84 | 64.11 |
Solyc07g063300.2.1 | Tomato | plasma membrane | 63.84 | 63.58 |
CDX97668 | Canola | cytosol | 62.4 | 63.31 |
CDY56827 | Canola | cytosol | 61.98 | 62.89 |
Bra027244.1-P | Field mustard | cytosol | 62.4 | 61.63 |
AT3G15430.2 | Thale cress | cytosol | 61.78 | 61.27 |
KRH27216 | Soybean | cytosol | 63.64 | 60.99 |
KRH49501 | Soybean | cytosol | 18.8 | 52.6 |
Bra021109.1-P | Field mustard | endoplasmic reticulum, extracellular | 61.98 | 36.5 |
CDY20113 | Canola | endoplasmic reticulum, extracellular | 61.57 | 36.12 |
CDY21840 | Canola | endoplasmic reticulum, extracellular | 61.36 | 35.96 |
TraesCS2B01G323100.1 | Wheat | unclear | 23.55 | 25.79 |
TraesCS6B01G180900.1 | Wheat | cytosol | 20.87 | 24.94 |
TraesCS7B01G200200.1 | Wheat | cytosol | 19.42 | 24.16 |
TraesCS3B01G347100.2 | Wheat | cytosol | 19.83 | 23.59 |
TraesCS2B01G360200.1 | Wheat | cytosol | 25.41 | 22.61 |
TraesCS5B01G170800.1 | Wheat | cytosol | 19.21 | 19.38 |
TraesCS5B01G366300.1 | Wheat | mitochondrion | 17.15 | 18.95 |
TraesCS3B01G581600.2 | Wheat | cytosol | 24.17 | 12.83 |
TraesCS7B01G090600.1 | Wheat | cytosol | 26.65 | 12.65 |
TraesCS1B01G252700.2 | Wheat | cytosol | 28.1 | 12.42 |
TraesCS1B01G024400.1 | Wheat | cytosol, mitochondrion, nucleus | 23.14 | 12.35 |
TraesCS2B01G609200.1 | Wheat | cytosol | 27.07 | 12.24 |
TraesCS3B01G543500.1 | Wheat | cytosol | 27.27 | 12.12 |
TraesCS1B01G384600.1 | Wheat | cytosol | 25.21 | 11.63 |
TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 23.76 | 11.15 |
TraesCS6B01G288400.1 | Wheat | cytosol | 24.38 | 11.06 |
Protein Annotations
EnsemblPlants:TraesCS2B01G254900.2 | EnsemblPlantsGene:TraesCS2B01G254900 | Gene3D:2.130.10.30 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:RCC1/BLIP-II |
InterPro:Reg_chr_condens | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF302 | PFAM:PF00415 | PFAM:PF13540 | PFscan:PS50012 |
PRINTS:PR00633 | ScanProsite:PS00626 | SUPFAM:SSF50985 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:-:286975753..286987722
Molecular Weight (calculated)
51377.2 Da
IEP (calculated)
7.623
GRAVY (calculated)
0.015
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEKSPRAF SMEELPGHLI GEVLSSGRLA AGDLARLEGT CRALRPLAEQ AASRLCAARM ACSVIGPAAR GELLARCGGS WKKVLRFLQS VEQSFDTVHT
101: SSGNMQVATG RYHTLLVHDS SVYSCGSSLC GVLGHGPDTT QCVAFSRVSF PSLARVVNIS AFHNHAAFVT ESGEVFTCGD NSSACCGHGD VGRTIFRPTQ
201: ILALKGISCK QVATGLSFTV ILTRNGLVYT CGSNTHGQLG HGDTTDRAAP KIVELFKGPS PVVQVAAGAS YTFAVTDDGT VYSFGSCTNF CLGHGDQHNE
301: LLPRAIQSFQ RRNILIVRVS AGDEHAVALD ALGYVYTWGR GYCGALGHGD ENDKTSPELI VGLKGQVAVQ VCARKRKTFV LTDEGSVFAF GWMGFGSLGF
401: PDRGSSDKVM QPRVLDSLSS HYVSQISTGL YHTVAVTNKG IVFGFGDNER AQLGQEFIRG CLKPTEIMFD KSSIEDIAIA APSG
101: SSGNMQVATG RYHTLLVHDS SVYSCGSSLC GVLGHGPDTT QCVAFSRVSF PSLARVVNIS AFHNHAAFVT ESGEVFTCGD NSSACCGHGD VGRTIFRPTQ
201: ILALKGISCK QVATGLSFTV ILTRNGLVYT CGSNTHGQLG HGDTTDRAAP KIVELFKGPS PVVQVAAGAS YTFAVTDDGT VYSFGSCTNF CLGHGDQHNE
301: LLPRAIQSFQ RRNILIVRVS AGDEHAVALD ALGYVYTWGR GYCGALGHGD ENDKTSPELI VGLKGQVAVQ VCARKRKTFV LTDEGSVFAF GWMGFGSLGF
401: PDRGSSDKVM QPRVLDSLSS HYVSQISTGL YHTVAVTNKG IVFGFGDNER AQLGQEFIRG CLKPTEIMFD KSSIEDIAIA APSG
001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
Arabidopsis Description
MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.