Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G241800.1 | Wheat | cytosol | 96.81 | 97.36 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 82.29 | 96.17 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 91.38 | 91.38 |
| Zm00001d017641_P004 | Maize | cytosol | 56.7 | 70.27 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 69.35 | 68.97 |
| Zm00001d051479_P005 | Maize | nucleus | 67.01 | 66.45 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 60.08 | 62.17 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 43.11 | 51.51 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 44.8 | 49.28 |
| CDX87986 | Canola | cytosol | 9.18 | 47.57 |
| Solyc02g036390.1.1 | Tomato | cytosol | 32.9 | 44.71 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 38.99 | 41.39 |
| AT1G65920.1 | Thale cress | cytosol | 38.71 | 41.05 |
| KRG98005 | Soybean | cytosol | 40.96 | 40.84 |
| PGSC0003DMT400043094 | Potato | nucleus | 41.14 | 40.8 |
| KRH30884 | Soybean | cytosol | 40.86 | 40.6 |
| CDY31624 | Canola | cytosol | 37.39 | 40.59 |
| Bra038181.1-P | Field mustard | cytosol | 37.49 | 39.92 |
| CDX87989 | Canola | cytosol | 37.02 | 39.42 |
| TraesCS3B01G543500.1 | Wheat | cytosol | 37.21 | 36.46 |
| TraesCS1B01G252700.2 | Wheat | cytosol | 36.36 | 35.43 |
| TraesCS3B01G581600.2 | Wheat | cytosol | 28.96 | 33.88 |
| TraesCS1B01G024400.1 | Wheat | cytosol, mitochondrion, nucleus | 28.77 | 33.85 |
| TraesCS1B01G384600.1 | Wheat | cytosol | 33.27 | 33.84 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 33.65 | 33.55 |
| TraesCS7B01G090600.1 | Wheat | cytosol | 32.05 | 33.53 |
| TraesCS2B01G323100.1 | Wheat | unclear | 12.37 | 29.86 |
| TraesCS6B01G180900.1 | Wheat | cytosol | 10.5 | 27.65 |
| TraesCS5B01G366300.1 | Wheat | mitochondrion | 10.22 | 24.89 |
| TraesCS2B01G254900.2 | Wheat | cytosol | 11.06 | 24.38 |
| TraesCS7B01G200200.1 | Wheat | cytosol | 8.72 | 23.91 |
| TraesCS3B01G347100.2 | Wheat | cytosol | 8.72 | 22.85 |
| TraesCS5B01G170800.1 | Wheat | cytosol | 10.22 | 22.71 |
| Solyc02g081250.1.1 | Tomato | cytosol | 41.52 | 21.23 |
| TraesCS2B01G360200.1 | Wheat | cytosol | 10.59 | 20.77 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 |
| InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 |
| PFAM:PF08381 | PFAM:PF16457 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 |
| PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS6B01G288400 |
| EnsemblPlants:TraesCS6B01G288400.1 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 |
| TIGR:cd13365 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:519397056..519403169
Molecular Weight (calculated)
117287.0 Da
IEP (calculated)
8.791
GRAVY (calculated)
-0.411
Length
1067 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGELEGRSS GPRGAEQAIV ALKKGAHLLK CGKRGKPRFC PFRLSCDEKL LIWYSKEREK SLSLSSVSSV VLGQKTENLL RLHWPEKEHH SLSVIYKNGE
0101: CSLDLICKDK DQADCWYLGL TALVSALYSP LLLVDSTSSR INSCANSPPS YIQQRNRLFS VHDTRKFTQV HSLYGSPRLI QNKVSKSSLD CSEAFVTPRQ
0201: RTWSDLDFYL ERITPEMVNR VKNSFMDIPV AAKIQEGITQ MPKLKASEGS HMACGIDSLK DIFAWGEVPG SVLENGDAPK DNVSLPRLLK PTQILDVQNV
0301: ACGEKHAAIV TKQGEVFSWG KESGGILGHK VSVSVSEPTI IESLTSIHMK AIALGAKHTC ALAISGELYE WGEGTHSLGL WDDQCQRSQW FPHKLFDPLD
0401: GVSVLKIACG QWHTAIISSS GQLFTYGDGT FGVLGHGDTM SVARPKEVES LKGLRAKAVA CGPWHTAAIV EILGTVKSNA PSGKLFTWGD ADKGKLGHAD
0501: KKSKLVPTCV KPLNDSDFAQ VSCAKALTVV LTITGVVFTI GSTEHGQLGN RRLSDTSICS VEGPLKTEFV RDISSGSSHV AVLTMNGKVY TWGKGTEGQL
0601: GLGDYTDRSS PTLVESLEDK QVDSIACGSN FTLAVCLHRS ISGKDQPVCS SCQLSFTFTR KKHNCYNCGS MFCNSCSSNK VSRAALGPDR SKRYRVCDMC
0701: FTQLQKIEGH GTLSSRSAIQ KEEAFPTEIR PYTPKLSRIF KEANSIMEKM TTSQGSNQRN QDLAVPVQLK TQRWGQVECP SQFKCARNNI PCCSIPNKQT
0801: VEVSLPQRMP EPVPPKGTGS MPEAATNLKE ELDSTENILL GEVKQLQAQV TTLAEQCRHR SLKVQLYKRK VEETWLIIMN EAAKCKAAKE IIKVLTNQRN
0901: TLSKKIDLAG EQSYNSITIP SRINDGQPVK AELPDPPDKN PVTGKFQQLS SIRDHNQQVD RERIQSSSAA VAKGSVMHRN SRRAPSNSNT YAGENDATIP
1001: PVDPNGTIEQ IERGVYVTVV TSPGGNKGVK RIRFSRKHFG EKEAQKWWEA NESKVFAKYS STEQVTE
0101: CSLDLICKDK DQADCWYLGL TALVSALYSP LLLVDSTSSR INSCANSPPS YIQQRNRLFS VHDTRKFTQV HSLYGSPRLI QNKVSKSSLD CSEAFVTPRQ
0201: RTWSDLDFYL ERITPEMVNR VKNSFMDIPV AAKIQEGITQ MPKLKASEGS HMACGIDSLK DIFAWGEVPG SVLENGDAPK DNVSLPRLLK PTQILDVQNV
0301: ACGEKHAAIV TKQGEVFSWG KESGGILGHK VSVSVSEPTI IESLTSIHMK AIALGAKHTC ALAISGELYE WGEGTHSLGL WDDQCQRSQW FPHKLFDPLD
0401: GVSVLKIACG QWHTAIISSS GQLFTYGDGT FGVLGHGDTM SVARPKEVES LKGLRAKAVA CGPWHTAAIV EILGTVKSNA PSGKLFTWGD ADKGKLGHAD
0501: KKSKLVPTCV KPLNDSDFAQ VSCAKALTVV LTITGVVFTI GSTEHGQLGN RRLSDTSICS VEGPLKTEFV RDISSGSSHV AVLTMNGKVY TWGKGTEGQL
0601: GLGDYTDRSS PTLVESLEDK QVDSIACGSN FTLAVCLHRS ISGKDQPVCS SCQLSFTFTR KKHNCYNCGS MFCNSCSSNK VSRAALGPDR SKRYRVCDMC
0701: FTQLQKIEGH GTLSSRSAIQ KEEAFPTEIR PYTPKLSRIF KEANSIMEKM TTSQGSNQRN QDLAVPVQLK TQRWGQVECP SQFKCARNNI PCCSIPNKQT
0801: VEVSLPQRMP EPVPPKGTGS MPEAATNLKE ELDSTENILL GEVKQLQAQV TTLAEQCRHR SLKVQLYKRK VEETWLIIMN EAAKCKAAKE IIKVLTNQRN
0901: TLSKKIDLAG EQSYNSITIP SRINDGQPVK AELPDPPDKN PVTGKFQQLS SIRDHNQQVD RERIQSSSAA VAKGSVMHRN SRRAPSNSNT YAGENDATIP
1001: PVDPNGTIEQ IERGVYVTVV TSPGGNKGVK RIRFSRKHFG EKEAQKWWEA NESKVFAKYS STEQVTE
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.