Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 1
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0057g00540.t01 | Wine grape | cytosol, mitochondrion | 17.37 | 64.52 |
| VIT_01s0026g02170.t01 | Wine grape | cytosol | 59.77 | 45.48 |
| Solyc03g116360.1.1 | Tomato | cytosol | 53.26 | 38.9 |
| VIT_06s0009g03550.t01 | Wine grape | nucleus | 58.61 | 36.59 |
| VIT_13s0067g03380.t01 | Wine grape | endoplasmic reticulum, extracellular | 57.02 | 35.88 |
| GSMUA_Achr4P00510_001 | Banana | cytosol | 47.9 | 34.44 |
| TraesCS7A01G185400.1 | Wheat | cytosol | 48.34 | 33.0 |
| CDX77871 | Canola | cytosol | 45.01 | 32.77 |
| TraesCS7D01G187100.3 | Wheat | cytosol | 48.34 | 32.71 |
| TraesCS7B01G090600.1 | Wheat | cytosol | 48.19 | 32.65 |
| Bra019511.1-P | Field mustard | cytosol | 44.86 | 32.39 |
| CDY21795 | Canola | cytosol | 44.72 | 32.29 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 41.1 | 30.12 |
| AT3G47660.4 | Thale cress | cytosol | 42.55 | 29.7 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 46.45 | 28.43 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 42.98 | 27.99 |
| VIT_07s0031g02560.t01 | Wine grape | cytosol | 16.93 | 26.29 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 37.63 | 25.87 |
| VIT_01s0026g01520.t01 | Wine grape | cytosol | 13.89 | 24.24 |
| PGSC0003DMT400001620 | Potato | cytosol | 13.6 | 23.5 |
| GSMUA_Achr7P20980_001 | Banana | cytosol | 48.48 | 23.06 |
| VIT_07s0031g02850.t01 | Wine grape | mitochondrion | 13.31 | 21.9 |
| VIT_14s0006g03240.t01 | Wine grape | cytosol | 12.45 | 21.77 |
| VIT_19s0014g03080.t01 | Wine grape | cytosol | 15.2 | 21.34 |
| VIT_14s0083g01020.t01 | Wine grape | cytosol | 14.47 | 20.92 |
| VIT_01s0137g00230.t01 | Wine grape | cytosol | 14.91 | 19.29 |
| VIT_03s0017g02290.t01 | Wine grape | endoplasmic reticulum, golgi | 8.25 | 17.33 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | MapMan:35.1 | ProteinID:CCB43100 | ProteinID:CCB43100.1 | UniProt:F6GT91 |
| EMBL:FN594950 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR011993 | PFAM:PF00415 | InterPro:PH-like_dom_sf |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF244 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI0002109CCA | ArrayExpress:VIT_17s0000g05980 |
| EnsemblPlantsGene:VIT_17s0000g05980 | EnsemblPlants:VIT_17s0000g05980.t01 | InterPro:Znf_FYVE_PHD | SEG:seg | : | : |
Description
No Description!
Coordinates
chr17:-:6515084..6546950
Molecular Weight (calculated)
75354.1 Da
IEP (calculated)
8.236
GRAVY (calculated)
-0.270
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSSFFLSFF PFFFPSQNTQ AITALKKGTY LLKYGRRGKP TFCPFRISND EKVLLWYAGR EEKQLQLCQV SRIIQGQHTA TFRQYPRLEK EDQSFSLMYK
101: DGSLDIICKD KDEAEVWFVA LRALISQCNY HNWINETRSD SGSLDHHTDI RRNTPLTVSA NSSDIISKGE AISDALVSRG VCRVGSSSFA RRNARLPKAL
201: ESTVMLDAQN IACGSKHAVL VTKQGAIFSW GEGYGGRLGH GVEADVSQPK LIDALSGLNI ELVACGEYHT CAVTLSGDLY TWGDGIYNFG LLGHGCGISH
301: WTPRKVSCQI EGMHVSSISC GPWHTAAVTS AGQLFTFGDG TFGALGHGDR NSSGTPREVE TLKGLRTIRA SCGIWHTAAV VEITTEPSIS SSAGKLFTWG
401: DGDKGQLGHR DKEPRLAPSC VTILDDMTFC QVACGHSITA ALTDSGQVYT MGSVEYGQLG SPQSADGLPS CTEAFCKACS SRKSLKASLA PNMNKPYRVC
501: DDCFTKLKKA LEFGFFPLPR VASGIKIHNL NEVAEKESLD SRPHGRLPRL TSFGSFKQAE NQHFKPNLKL ELNNGHVPTL NGSFQWEGFC TSNTSTSVFG
601: SSQKASASVP GSRIVSRATS PGSSMVSRAT SPVSRNSTSS YSMTLALDRI ARSNLEVSLD HSKQTNDSLL QEIILLRAQF SIVSQEQQAC Y
101: DGSLDIICKD KDEAEVWFVA LRALISQCNY HNWINETRSD SGSLDHHTDI RRNTPLTVSA NSSDIISKGE AISDALVSRG VCRVGSSSFA RRNARLPKAL
201: ESTVMLDAQN IACGSKHAVL VTKQGAIFSW GEGYGGRLGH GVEADVSQPK LIDALSGLNI ELVACGEYHT CAVTLSGDLY TWGDGIYNFG LLGHGCGISH
301: WTPRKVSCQI EGMHVSSISC GPWHTAAVTS AGQLFTFGDG TFGALGHGDR NSSGTPREVE TLKGLRTIRA SCGIWHTAAV VEITTEPSIS SSAGKLFTWG
401: DGDKGQLGHR DKEPRLAPSC VTILDDMTFC QVACGHSITA ALTDSGQVYT MGSVEYGQLG SPQSADGLPS CTEAFCKACS SRKSLKASLA PNMNKPYRVC
501: DDCFTKLKKA LEFGFFPLPR VASGIKIHNL NEVAEKESLD SRPHGRLPRL TSFGSFKQAE NQHFKPNLKL ELNNGHVPTL NGSFQWEGFC TSNTSTSVFG
601: SSQKASASVP GSRIVSRATS PGSSMVSRAT SPVSRNSTSS YSMTLALDRI ARSNLEVSLD HSKQTNDSLL QEIILLRAQF SIVSQEQQAC Y
0001: MADPASCYIY HERDVDQALV VLKKGTQLLK YSRKGKPKFR AFRLSPDEKT LIWFSRGEEK GLKLFEVSRI VPGQRTAVFK RFLRPEKDHL SFSLLYNNRE
0101: RSLDLICKDK AETEVWFAAL KFLIEKSRNR RARSEIPEIH DSDTFSVGRQ SIDFVPSNIP RGRTSIDLGY QNNSDVGYER GNMLRPSTDG FRISVSSTPS
0201: CSSGGSGPDD IESLGDVYVW GEVWTEGILP DGTASNETVK TDVLTPRPLE SNVVLDVHQI VCGVRHVALV TRQGEVFTWG EEVGGRLGHG IQVDISRPKL
0301: VEFLALTNID FVACGEYHTC VVSTSGDLFS WGDGIHNVGL LGHGSDISHW IPKRVSGPLE GLQVLSVACG TWHSALATAN GKLFTFGDGA FGVLGHGNRE
0401: SVSYPKEVQS LNGLKTVKVA CSIWHTAAIV EVMGQTATSM SSRKLFTWGD GDKNRLGHGN KETYLLPTCV SSLIDYNFHK IACGHTFTVA LTTSGHVFTM
0501: GGTAHGQLGN SISDGKLPCL VQDRLVGEFV EEIACGAHHV AVLTSRSEVF TWGKGANGRL GHGDTEDKRT PTLVEALRDR HVKSLSCGSN FTSSICIHKW
0601: VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS
0701: KVLLSANKNS VMSSSRPGFT PESSNARASQ VPSLQQLKDI AFPSSLSAIQ NAFKPVVAPT TTPPRTLVIG PSSPSPPPPP RSSSPYARRP SPPRTSGFSR
0801: SVIDSLRKTN EVMNQEMTKL HSQVKNLKQR CNNQGTEIER FQKAAKDASE LAARQSSKHK AATEALKSVA EQLKELKEKL PPEVSESEAF ESINSQAEAY
0901: LNANKVSETS PLTTSGQEQE TYQKTEEQVP SNSSITETSS SSRAPSTEAS SSRISGKESK EQFEPGVYVT YEVDMNGNKI FRRVRFSKKR FDEHQAEDWW
1001: TKNKDRLLKC YSSNSSSSSS SSNPTASDSP VAPQPPSDPS VPEQSNEKEP DSET
0101: RSLDLICKDK AETEVWFAAL KFLIEKSRNR RARSEIPEIH DSDTFSVGRQ SIDFVPSNIP RGRTSIDLGY QNNSDVGYER GNMLRPSTDG FRISVSSTPS
0201: CSSGGSGPDD IESLGDVYVW GEVWTEGILP DGTASNETVK TDVLTPRPLE SNVVLDVHQI VCGVRHVALV TRQGEVFTWG EEVGGRLGHG IQVDISRPKL
0301: VEFLALTNID FVACGEYHTC VVSTSGDLFS WGDGIHNVGL LGHGSDISHW IPKRVSGPLE GLQVLSVACG TWHSALATAN GKLFTFGDGA FGVLGHGNRE
0401: SVSYPKEVQS LNGLKTVKVA CSIWHTAAIV EVMGQTATSM SSRKLFTWGD GDKNRLGHGN KETYLLPTCV SSLIDYNFHK IACGHTFTVA LTTSGHVFTM
0501: GGTAHGQLGN SISDGKLPCL VQDRLVGEFV EEIACGAHHV AVLTSRSEVF TWGKGANGRL GHGDTEDKRT PTLVEALRDR HVKSLSCGSN FTSSICIHKW
0601: VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS
0701: KVLLSANKNS VMSSSRPGFT PESSNARASQ VPSLQQLKDI AFPSSLSAIQ NAFKPVVAPT TTPPRTLVIG PSSPSPPPPP RSSSPYARRP SPPRTSGFSR
0801: SVIDSLRKTN EVMNQEMTKL HSQVKNLKQR CNNQGTEIER FQKAAKDASE LAARQSSKHK AATEALKSVA EQLKELKEKL PPEVSESEAF ESINSQAEAY
0901: LNANKVSETS PLTTSGQEQE TYQKTEEQVP SNSSITETSS SSRAPSTEAS SSRISGKESK EQFEPGVYVT YEVDMNGNKI FRRVRFSKKR FDEHQAEDWW
1001: TKNKDRLLKC YSSNSSSSSS SSNPTASDSP VAPQPPSDPS VPEQSNEKEP DSET
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.