Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra008668.1-P | |
| Bra023541.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | Bra008668.1-P | AT5G15850.1 | 16854975 |
| AT4G11110.1 | Bra023541.1-P | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86817 | Canola | nucleus | 97.55 | 98.66 |
| CDY40851 | Canola | nucleus | 96.22 | 95.93 |
| AT4G11110.1 | Thale cress | nucleus | 83.67 | 79.15 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 17.86 | 72.61 |
| Bra021818.1-P | Field mustard | cytosol | 6.12 | 50.42 |
| KRH60015 | Soybean | plasma membrane | 42.65 | 49.82 |
| KRH41290 | Soybean | nucleus | 48.27 | 45.74 |
| GSMUA_Achr11P... | Banana | cytosol | 38.06 | 45.27 |
| KRH27856 | Soybean | nucleus | 50.0 | 43.63 |
| KRH77627 | Soybean | nucleus | 49.49 | 42.96 |
| Solyc08g081990.2.1 | Tomato | cytosol | 43.98 | 40.97 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 41.84 | 40.2 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 32.86 | 38.94 |
| Bra000420.1-P | Field mustard | nucleus | 37.86 | 38.93 |
| Bra004545.1-P | Field mustard | nucleus | 40.0 | 38.81 |
| Bra026485.1-P | Field mustard | cytosol | 7.76 | 38.38 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 41.53 | 37.97 |
| Os05t0571000-01 | Rice | cytosol | 42.96 | 36.8 |
| EES19971 | Sorghum | cytosol | 42.24 | 36.7 |
| Zm00001d039072_P005 | Maize | cytosol | 41.94 | 36.63 |
| Bra021100.1-P | Field mustard | nucleus | 28.88 | 36.28 |
| Bra027259.1-P | Field mustard | nucleus, plastid | 29.08 | 35.89 |
| Zm00001d009617_P017 | Maize | mitochondrion | 41.63 | 35.6 |
| PGSC0003DMT400031699 | Potato | cytosol | 30.31 | 33.83 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 42.86 | 33.02 |
| Bra029131.1-P | Field mustard | cytosol | 11.33 | 32.27 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 43.47 | 31.91 |
| Bra038098.1-P | Field mustard | nucleus | 10.31 | 31.08 |
| Bra005541.1-P | Field mustard | nucleus | 20.1 | 29.45 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | EnsemblPlantsGene:Bra035252 | EnsemblPlants:Bra035252.1 |
| EnsemblPlants:Bra035252.1-P | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Kinase-like_dom_sf | UniProt:M4F2F4 | PFAM:PF00400 | ScanProsite:PS00678 |
| PFscan:PS50011 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | InterPro:Prot_kinase_dom |
| SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI0002546CDD | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
AT4G11110 (E=0.0) SPA2 | SPA2 (SPA1-RELATED 2); protein binding / signal transducer
Coordinates
chrA08:-:9602779..9607207
Molecular Weight (calculated)
108128.0 Da
IEP (calculated)
5.396
GRAVY (calculated)
-0.478
Length
980 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDESSVSSS INEAEAAHIQ FKNGQQSLKP DEIQETKQVQ AEVQRDDPGS PDSSFGVIAD FLDGKNVNET ENEPCSSRQD ANDDDDDVVE ELTVKTCQGS
101: SMAIVGSSSS RARLEINRTQ FLPSSTSMEG DKVITSILRN AGKTSTGDDV ERNPVPVEAL AHGGIKTKML SQSGFSQFFV KKTLKGKGVT FRGPPPNRSK
201: ASNVDQQSVA SPLVISNNTP AKVSGNTPLA VEACDVLPLK GGNPSSCTSN PSDSGCGGEG LSLRDWLKSE RQEVIKAECF RIFRQIVERV DDSHSQGVVL
301: SDLRPSLFKI LKENEVKYVG SGFQRESSDS NVNKNTLSQP EKPLVRRRLG DSGFASSPGV PAKRQKSSGP SSRQWPMFQR AGGNLNIQTE NDVGATQELH
401: LRSSHPQCSP SARSFTSMSE QLEEKWYASP EELRGETRSV SANIYSLGIL LFELLSQFQS ERAREAAMSD IRHRILPPKF LSENPKEAGF CLWDILQSEV
501: VNGIPDLYAE GLSLAIEQED TESELLQHFL VLSQEQRQKH AGKLMGEIVS LEADIEEIVK RRCAISPLSV GEASSSSLAS SVPEMRLVTN IRQLETAYFG
601: ARIDVHLPEA RYRLRPDRDL LRNRDENVIS EQENSETWSS DDRVGAFFDG LCKYARYSKF ETRGVLRTGE LNNTSNVICS LGFDRDEDYF ATAGVSKKIK
701: IFEFNSLFNE SVDIHYPAVE MSNRSKLSGV CWNNYIRNYL ASSDYDGIIK LWDVTTGQAI SHFIEHEKRA WSVDFSEACP TKLASGSDDC SRNCLGTIRN
801: IANVCCVQFS PQSSHLLAFG SSDFRTYCYD TRNLRTPWCI LSGHNKAVSY AKFLDSETLV TASTDNTLKL WDLKKTTHGG LSTNACGLTF GGHTNEKNFV
901: GLSTADGYIA CGSETNEVYA YHRSLPMPIT AYKFGSIDPI SGKEIEEDNN LFVSSVCWRK RSNMVVSASS NGSIKVLQLV
101: SMAIVGSSSS RARLEINRTQ FLPSSTSMEG DKVITSILRN AGKTSTGDDV ERNPVPVEAL AHGGIKTKML SQSGFSQFFV KKTLKGKGVT FRGPPPNRSK
201: ASNVDQQSVA SPLVISNNTP AKVSGNTPLA VEACDVLPLK GGNPSSCTSN PSDSGCGGEG LSLRDWLKSE RQEVIKAECF RIFRQIVERV DDSHSQGVVL
301: SDLRPSLFKI LKENEVKYVG SGFQRESSDS NVNKNTLSQP EKPLVRRRLG DSGFASSPGV PAKRQKSSGP SSRQWPMFQR AGGNLNIQTE NDVGATQELH
401: LRSSHPQCSP SARSFTSMSE QLEEKWYASP EELRGETRSV SANIYSLGIL LFELLSQFQS ERAREAAMSD IRHRILPPKF LSENPKEAGF CLWDILQSEV
501: VNGIPDLYAE GLSLAIEQED TESELLQHFL VLSQEQRQKH AGKLMGEIVS LEADIEEIVK RRCAISPLSV GEASSSSLAS SVPEMRLVTN IRQLETAYFG
601: ARIDVHLPEA RYRLRPDRDL LRNRDENVIS EQENSETWSS DDRVGAFFDG LCKYARYSKF ETRGVLRTGE LNNTSNVICS LGFDRDEDYF ATAGVSKKIK
701: IFEFNSLFNE SVDIHYPAVE MSNRSKLSGV CWNNYIRNYL ASSDYDGIIK LWDVTTGQAI SHFIEHEKRA WSVDFSEACP TKLASGSDDC SRNCLGTIRN
801: IANVCCVQFS PQSSHLLAFG SSDFRTYCYD TRNLRTPWCI LSGHNKAVSY AKFLDSETLV TASTDNTLKL WDLKKTTHGG LSTNACGLTF GGHTNEKNFV
901: GLSTADGYIA CGSETNEVYA YHRSLPMPIT AYKFGSIDPI SGKEIEEDNN LFVSSVCWRK RSNMVVSASS NGSIKVLQLV
0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
Arabidopsis Description
SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.