Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | KRG93763 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | KRH01455 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | KRH18308 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | KRH45169 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27856 | Soybean | nucleus | 93.98 | 94.48 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 17.8 | 83.4 |
| KRH60015 | Soybean | plasma membrane | 53.32 | 71.75 |
| KRH41290 | Soybean | nucleus | 63.15 | 68.96 |
| KRH25904 | Soybean | mitochondrion | 5.14 | 52.25 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 36.67 | 50.06 |
| CDX86817 | Canola | nucleus | 42.69 | 49.74 |
| Bra035252.1-P | Field mustard | nucleus | 42.96 | 49.49 |
| Solyc08g081990.2.1 | Tomato | cytosol | 45.97 | 49.33 |
| CDY40851 | Canola | nucleus | 42.78 | 49.14 |
| GSMUA_Achr11P... | Banana | cytosol | 35.52 | 48.66 |
| AT4G11110.1 | Thale cress | nucleus | 44.29 | 48.26 |
| KRH55271 | Soybean | cytosol | 5.4 | 48.03 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 41.81 | 46.27 |
| PGSC0003DMT400031699 | Potato | cytosol | 33.66 | 43.28 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 40.39 | 42.54 |
| EES19971 | Sorghum | cytosol | 40.74 | 40.78 |
| KRH06512 | Soybean | nucleus | 36.85 | 40.66 |
| Zm00001d039072_P005 | Maize | cytosol | 40.12 | 40.37 |
| KRH47949 | Soybean | nucleus | 36.85 | 40.19 |
| Os05t0571000-01 | Rice | cytosol | 40.48 | 39.95 |
| Zm00001d009617_P017 | Maize | mitochondrion | 40.3 | 39.7 |
| KRH26155 | Soybean | cytosol | 26.31 | 37.69 |
| KRH55275 | Soybean | cytosol | 26.75 | 37.56 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 41.36 | 36.71 |
| KRH22086 | Soybean | plastid | 28.08 | 34.99 |
| KRH27246 | Soybean | plastid | 28.08 | 34.95 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 40.92 | 34.61 |
| KRH73341 | Soybean | nucleus | 18.95 | 31.99 |
| KRH14801 | Soybean | nucleus | 18.95 | 31.7 |
Protein Annotations
| EntrezGene:100784300 | MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | EMBL:ACUP02000681 |
| ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | EnsemblPlantsGene:GLYMA_01G224200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K7K5A8 | ProteinID:KRH77626.1 | EnsemblPlants:KRH77627 |
| ProteinID:KRH77627 | ProteinID:KRH77627.1 | ProteinID:KRH77628.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00400 | PRINTS:PR00320 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | SMART:SM00320 |
| SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI0002336C8A | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:55307957..55317678
Molecular Weight (calculated)
126026.0 Da
IEP (calculated)
6.458
GRAVY (calculated)
-0.497
Length
1129 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEDFVDEAT QLEVAEESQR QNKDSPHPEC RKILKSLEAF IPVKQDYSQI PPREYDGILH GKNVVEGIDH ADTSQHPHVS LFMDDADVMV EELTVKSYNG
0101: SSLDIGTSNN REQIYNRQNH WQNLYQLASN SGIGNSLSDI GTRNSVPATS SAREDIGSSS FPEMLARKSL SDGQSNVMEH LASAENKEGA GDVRQGTRKK
0201: IISQSGFAEF FIKNTLRGKG IVYKGPSSDG FCVQSREQNW MKIGIDADQN RMKTGIGADQ NRLKTVIDAD QNQLKTGIDA DQNRLKTGID ADQNQMKASI
0301: GTDQNQMKNH SGTDQKQMKT GIVTHLNSNQ SVGYGSKTAK FPSYCGAMPR SGRSDCVGVT LREWLKHGHH KASKVESLNI FRKIVDLVDI CHSQGVALHN
0401: LCPSYIKLSP SNQIMYLGLP VQKQMVDSVV NSEVVHLDNS FIRKRLSEQV TFPSLDMGSK KKKFNENVRV TGGDLCLETA SDRKLHSHTV GSQDYYNEYE
0501: EGTQFSKYNI GRMSSIPRVS NAGQMPLTSC EKFENKWYTS PEGGYTTSSN IYCLGVLLFE LLGHFDSERT HIAAMSDLRH RILPPIFLSE NPKEAGFCLW
0601: LLHPEPSSRP STREILQSEL INGLQELFSE ELSSSIDQED AESELLLHFL VLLKEQKQNN AFKLVEEIKC LESDIEEVER RHDSRKSLVS SGLQNDYSCQ
0701: KEIMPLKKES LSLEMLPSIS PISNSNKVRL MRSICHLEGA YFSTRSKLQL SETDASTHPD KDILRNRENQ NVAQKSEEQP KKDTLGVFFD GLCKYARYCK
0801: FEVRGVLRNV DFNNPANVIC SLSFDRDADY FASAGISRKI KIFEFSALCN DSVDIHYPAV EMSNRSKLSC VCWNNYIKNY LASTDYDGIV KLWDASTGQE
0901: FSQFTEHEKR AWSVDFSAVC PTKFASGSDD CTVKLWSISE RNCLGTIRNA ANVCCVQFSA HSSHLLAFGS ADYSTYCYDL RNLRSPWCVL AGHRKAVSYV
1001: KFLDSETLVS ASTDNTLKIW DLNKTSPVGA SINACSLTLS GHTNEKNFVG LSVADGYIAC GSETNEVYTY YRSLPMPVTS HKFGSIDPIS GKDTDDDNGQ
1101: FVSSVCWRGK SGMLIAANSS GCVKVLQMV
0101: SSLDIGTSNN REQIYNRQNH WQNLYQLASN SGIGNSLSDI GTRNSVPATS SAREDIGSSS FPEMLARKSL SDGQSNVMEH LASAENKEGA GDVRQGTRKK
0201: IISQSGFAEF FIKNTLRGKG IVYKGPSSDG FCVQSREQNW MKIGIDADQN RMKTGIGADQ NRLKTVIDAD QNQLKTGIDA DQNRLKTGID ADQNQMKASI
0301: GTDQNQMKNH SGTDQKQMKT GIVTHLNSNQ SVGYGSKTAK FPSYCGAMPR SGRSDCVGVT LREWLKHGHH KASKVESLNI FRKIVDLVDI CHSQGVALHN
0401: LCPSYIKLSP SNQIMYLGLP VQKQMVDSVV NSEVVHLDNS FIRKRLSEQV TFPSLDMGSK KKKFNENVRV TGGDLCLETA SDRKLHSHTV GSQDYYNEYE
0501: EGTQFSKYNI GRMSSIPRVS NAGQMPLTSC EKFENKWYTS PEGGYTTSSN IYCLGVLLFE LLGHFDSERT HIAAMSDLRH RILPPIFLSE NPKEAGFCLW
0601: LLHPEPSSRP STREILQSEL INGLQELFSE ELSSSIDQED AESELLLHFL VLLKEQKQNN AFKLVEEIKC LESDIEEVER RHDSRKSLVS SGLQNDYSCQ
0701: KEIMPLKKES LSLEMLPSIS PISNSNKVRL MRSICHLEGA YFSTRSKLQL SETDASTHPD KDILRNRENQ NVAQKSEEQP KKDTLGVFFD GLCKYARYCK
0801: FEVRGVLRNV DFNNPANVIC SLSFDRDADY FASAGISRKI KIFEFSALCN DSVDIHYPAV EMSNRSKLSC VCWNNYIKNY LASTDYDGIV KLWDASTGQE
0901: FSQFTEHEKR AWSVDFSAVC PTKFASGSDD CTVKLWSISE RNCLGTIRNA ANVCCVQFSA HSSHLLAFGS ADYSTYCYDL RNLRSPWCVL AGHRKAVSYV
1001: KFLDSETLVS ASTDNTLKIW DLNKTSPVGA SINACSLTLS GHTNEKNFVG LSVADGYIAC GSETNEVYTY YRSLPMPVTS HKFGSIDPIS GKDTDDDNGQ
1101: FVSSVCWRGK SGMLIAANSS GCVKVLQMV
001: MKGSSESSSR GLNNTSGVSE FCTDGSKSLS HIDYVRSLLG SHKEANLGGL DDDSIVRALE CEDVSLRQWL DNPDRSVDAF ECFHVFRQIV EIVNAAHSQG
101: IVVHNVRPSC FVMSSFNNVS FIESASCSDS GSDEDATTKS REIGSSRQEE ILSERRSKQQ EEVKKQPFPM KQILAMEMSW YTSHEEDNGS LCNCASDIYR
201: LGVLLFELFC PVSSREEKSR TMSSLRHRVL PPQILLNWPK EASFCLWLLH PEPSCRPSMS ELLQSEFINE PRENLEEREA AMELRDRIEE QELLLEFLFL
301: IQQRKQEAAD KLQDTISLLS SDIDQVVKRQ LVLQQKGRDV RSFLASRKRI RQGAETTAAE EENDDNSIDE ESKLDDTLES TLLESSRLMR NLKKLESVYF
401: ATRYRQIKAA TAAEKPLARY YSALSCNGRS SEKSSMSQPS KDPINDSRQG GWIDPFLEGL CKYLSFSKLR VKADLKQGDL LNSSNLVCAI GFDRDGEFFA
501: TAGVNKKIKI FECESIIKDG RDIHYPVVEL ASRSKLSGIC WNSYIKSQVA SSNFEGVVQV WDVARNQLVT EMKEHEKRVW SIDYSSADPT LLASGSDDGS
601: VKLWSINQGV SIGTIKTKAN ICCVQFPSET GRSLAFGSAD HKVYYYDLRN PKLPLCTMIG HHKTVSYVRF VDSSTLVSSS TDNTLKLWDL SMSISGINET
701: PLHSFMGHTN VKNFVGLSVS DGYIATGSET NEVFVYHKAF PMPVLSYKFK TIDPVSELEV DDASQFISSV CWRGQSSTLV AANSTGNIKI LEMV
101: IVVHNVRPSC FVMSSFNNVS FIESASCSDS GSDEDATTKS REIGSSRQEE ILSERRSKQQ EEVKKQPFPM KQILAMEMSW YTSHEEDNGS LCNCASDIYR
201: LGVLLFELFC PVSSREEKSR TMSSLRHRVL PPQILLNWPK EASFCLWLLH PEPSCRPSMS ELLQSEFINE PRENLEEREA AMELRDRIEE QELLLEFLFL
301: IQQRKQEAAD KLQDTISLLS SDIDQVVKRQ LVLQQKGRDV RSFLASRKRI RQGAETTAAE EENDDNSIDE ESKLDDTLES TLLESSRLMR NLKKLESVYF
401: ATRYRQIKAA TAAEKPLARY YSALSCNGRS SEKSSMSQPS KDPINDSRQG GWIDPFLEGL CKYLSFSKLR VKADLKQGDL LNSSNLVCAI GFDRDGEFFA
501: TAGVNKKIKI FECESIIKDG RDIHYPVVEL ASRSKLSGIC WNSYIKSQVA SSNFEGVVQV WDVARNQLVT EMKEHEKRVW SIDYSSADPT LLASGSDDGS
601: VKLWSINQGV SIGTIKTKAN ICCVQFPSET GRSLAFGSAD HKVYYYDLRN PKLPLCTMIG HHKTVSYVRF VDSSTLVSSS TDNTLKLWDL SMSISGINET
701: PLHSFMGHTN VKNFVGLSVS DGYIATGSET NEVFVYHKAF PMPVLSYKFK TIDPVSELEV DDASQFISSV CWRGQSSTLV AANSTGNIKI LEMV
Arabidopsis Description
SPA4SPA4 [Source:UniProtKB/TrEMBL;Acc:A0A178WBA0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.