Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g042910.1.1 | Tomato | mitochondrion | 97.03 | 97.03 |
| VIT_09s0002g05990.t01 | Wine grape | mitochondrion | 79.04 | 79.18 |
| AT3G15620.1 | Thale cress | mitochondrion | 75.51 | 73.2 |
| KRH44412 | Soybean | mitochondrion, plastid | 75.7 | 72.47 |
| CDY20139 | Canola | cytosol, nucleus, plastid | 74.95 | 72.01 |
| CDY21853 | Canola | mitochondrion, plastid | 75.14 | 71.81 |
| Bra021122.1-P | Field mustard | cytosol | 43.04 | 70.73 |
| GSMUA_Achr8P26060_001 | Banana | cytosol | 65.31 | 67.56 |
| TraesCS6D01G167100.1 | Wheat | plastid | 65.49 | 64.77 |
| Os02t0204400-00 | Rice | plastid | 65.68 | 64.25 |
| EES04723 | Sorghum | cytosol, plastid | 65.31 | 64.0 |
| TraesCS6A01G177000.2 | Wheat | mitochondrion, plastid | 64.75 | 62.88 |
| HORVU6Hr1G037460.6 | Barley | plastid | 64.94 | 60.55 |
| Zm00001d015724_P001 | Maize | plastid | 39.15 | 57.97 |
| PGSC0003DMT400022039 | Potato | cytosol, mitochondrion, plastid | 25.97 | 24.01 |
| PGSC0003DMT400076096 | Potato | cytosol, plastid | 22.82 | 22.57 |
| PGSC0003DMT400044219 | Potato | cytosol | 24.49 | 20.4 |
| PGSC0003DMT400081378 | Potato | cytosol | 15.21 | 18.1 |
Protein Annotations
| Gene3D:1.10.579.10 | Gene3D:1.25.40.80 | EntrezGene:102605735 | MapMan:14.9.1 | Gene3D:3.40.50.620 | ncoils:Coil |
| InterPro:Crypto/Photolyase_FAD-like_sf | InterPro:Crypto/Photolyase_N_sf | InterPro:Cryptochr/Photolyase_FAD-bd | InterPro:DNA_photolyase_N | InterPro:IPR006050 | InterPro:IPR014729 |
| UniProt:M1CSG5 | PFAM:PF00875 | PFAM:PF03441 | EnsemblPlantsGene:PGSC0003DMG400028620 | PGSC:PGSC0003DMG400028620 | EnsemblPlants:PGSC0003DMT400073684 |
| PFscan:PS51645 | PANTHER:PTHR11455 | PANTHER:PTHR11455:SF9 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF48173 | SUPFAM:SSF52425 |
| UniParc:UPI000296275F | RefSeq:XP_006346589.1 | SEG:seg | : | : | : |
Description
DNA photolyase [Source:PGSC_GENE;Acc:PGSC0003DMG400028620]
Coordinates
chr12:-:49878050..49883993
Molecular Weight (calculated)
61294.5 Da
IEP (calculated)
9.131
GRAVY (calculated)
-0.340
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGANSLMW FRKGLRLHDN PALEYAAKGS KFLYPVFVID PHYMEPDPTA FSLGSSKAGL NRIQFLLESL VDLDLSLKKV GSRLLVLKGD PGEVLIRCLK
101: EWSIGKLCFE YDTEPYYQAL DEKVKGYVSG TGVEIFSPVS HTLYNPADII RKNGGSPPLS YQSFLKLAGQ PSWATTPLLT TISSLPPIGN TGSFAVSEVP
201: TVRELGYEDL AEDERTPFKG GESEALKRLR ESIANKEWVA NFEKPKGDPS AFLKPATTVL SPYLKFGCLS SRYFYQCIQD ILKCSKKHTS PPVSLLGQLL
301: WRDFFYTAAF GTPNFNQMKG NRICKQIPWK NDDELLAAWR DSRTGFPWID AIMVQLRKWG WIHHLARHSV ACFLTRGDLF VHWERGRHVF ERLLIDSDWA
401: INNGNWLWLS CSSFFYQYNR IYSPISFGKK YDSAGNYIRH FLPVLKDMPK EYIYEPWTAP ISVQRKAKCI IGIDYPKPVV SHDSASKECK MRLGEAYALN
501: KKLNGLVSDE DLNELRRKAD NESTTLDSVS RKKKQKLID
101: EWSIGKLCFE YDTEPYYQAL DEKVKGYVSG TGVEIFSPVS HTLYNPADII RKNGGSPPLS YQSFLKLAGQ PSWATTPLLT TISSLPPIGN TGSFAVSEVP
201: TVRELGYEDL AEDERTPFKG GESEALKRLR ESIANKEWVA NFEKPKGDPS AFLKPATTVL SPYLKFGCLS SRYFYQCIQD ILKCSKKHTS PPVSLLGQLL
301: WRDFFYTAAF GTPNFNQMKG NRICKQIPWK NDDELLAAWR DSRTGFPWID AIMVQLRKWG WIHHLARHSV ACFLTRGDLF VHWERGRHVF ERLLIDSDWA
401: INNGNWLWLS CSSFFYQYNR IYSPISFGKK YDSAGNYIRH FLPVLKDMPK EYIYEPWTAP ISVQRKAKCI IGIDYPKPVV SHDSASKECK MRLGEAYALN
501: KKLNGLVSDE DLNELRRKAD NESTTLDSVS RKKKQKLID
001: MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG
101: SRLLVFKGEP GEVLVRCLQE WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY QSFLKVAGEP SCAKSELVMS
201: YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301: YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI
401: HWEQGRDVFE RLLIDSDWAI NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL SVQTKANCIV GKDYPKPMVL
501: HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK DEHEESKIRN QRPKLK
101: SRLLVFKGEP GEVLVRCLQE WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY QSFLKVAGEP SCAKSELVMS
201: YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301: YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI
401: HWEQGRDVFE RLLIDSDWAI NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL SVQTKANCIV GKDYPKPMVL
501: HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK DEHEESKIRN QRPKLK
Arabidopsis Description
UVR3(6-4)DNA photolyase [Source:UniProtKB/Swiss-Prot;Acc:O48652]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.