Factsheet for HORVU6Hr1G037460.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G167100.1	Wheat	plastid	90.31	95.78
TraesCS6A01G177000.2	Wheat	mitochondrion, plastid	88.41	92.07
Os02t0204400-00	Rice	plastid	81.14	85.12
EES04723	Sorghum	cytosol, plastid	79.07	83.09
Zm00001d015724_P001	Maize	plastid	50.69	80.49
GSMUA_Achr8P26060_001	Banana	cytosol	64.71	71.78
Bra021122.1-P	Field mustard	cytosol	37.89	66.77
VIT_09s0002g05990.t01	Wine grape	mitochondrion	62.11	66.73
PGSC0003DMT400073684	Potato	mitochondrion	60.55	64.94
Solyc12g042910.1.1	Tomato	mitochondrion	60.21	64.56
AT3G15620.1	Thale cress	mitochondrion	61.94	64.39
CDY20139	Canola	cytosol, nucleus, plastid	61.76	63.64
CDY21853	Canola	mitochondrion, plastid	61.94	63.48
KRH44412	Soybean	mitochondrion, plastid	60.73	62.34
HORVU7Hr1G109800.2	Barley	plastid	23.01	22.43
HORVU6Hr1G058740.2	Barley	cytosol	25.26	22.26
HORVU6Hr1G049950.12	Barley	cytosol, mitochondrion	25.95	21.01
HORVU2Hr1G079220.2	Barley	cytosol	24.22	19.66
HORVU7Hr1G080580.2	Barley	plastid	14.01	16.8

Protein Annotations

Gene3D:1.10.579.10	Gene3D:1.25.40.80	MapMan:14.9.1	Gene3D:3.40.50.620	UniProt:A0A287TY19	InterPro:Crypto/Photolyase_FAD-like_sf
InterPro:Crypto/Photolyase_N_sf	InterPro:Cryptochr/Photolyase_FAD-bd	InterPro:DNA_photolyase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0003914
GO:GO:0008150	GO:GO:0009411	GO:GO:0009628	EnsemblPlantsGene:HORVU6Hr1G037460	EnsemblPlants:HORVU6Hr1G037460.6	InterPro:IPR006050
InterPro:IPR014729	PFAM:PF00875	PFAM:PF03441	PFscan:PS51645	PANTHER:PTHR11455	PANTHER:PTHR11455:SF9
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48173	SUPFAM:SSF52425	UniParc:UPI000B47803E	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:-:187823812..187837218

Molecular Weight (calculated)

65207.7 Da

IEP (calculated)

8.768

GRAVY (calculated)

-0.365

Length

578 amino acids

Sequence
(BLAST)

001: MFHTHASLHN FLFFATSLHN FPIRSVGDPP PLMDAATAAT ATAAAAALVW FRKGLRVHDN PALDAARRSA ARVYPVFVLD PRYLRPDPAA PSPGSAHAGV
101: ARVRFLLESL LDLDARLRCL GSRLLVLRAR DDVSDAVCAA LKDWNIGKLC FESDTEPYAL ARDKRVTDFA AASGIEVFSP VSHTLFDPAE IIEKNGGRPP
201: LTYQSFVATA GEPPKPVMEE YSVLPPIGDT GGYELLPVPK LEELGYGDLS QEYIPPFRGG ETEALKRMRE SLQDKEWVAK FEKPKGDPSA FVKPATTVLS
301: PYLKFGCLSV RYFYHCIQDV YRSAKTHTKP PVSLAGQLLW RDFFYTVSLG TPNFDHMEGN PICKQIPWRE SEELFVAWRD GRTGYPWIDA IMIQLRKWGW
401: MHHLARHSVA CFLTRGDLYI HWEQGRDVFE RLLIDSDWAI NNGNWLWLSC SSFFYQYHRI YSPISFGKKY DPNGDYIRHF IPVLKDMPKE YIYEPWTAPL
501: SVQEKARCIV GKDYPKPVVD HEAASKGCRR RMGEAYASNR LGGSTVKGNS SNSSRRKLCH GGQDVPDSSK SKQPRKRS

Best Arabidopsis Sequence Match ( AT3G15620.1 )
(BLAST)

001: MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG
101: SRLLVFKGEP GEVLVRCLQE WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY QSFLKVAGEP SCAKSELVMS
201: YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301: YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI
401: HWEQGRDVFE RLLIDSDWAI NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL SVQTKANCIV GKDYPKPMVL
501: HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK DEHEESKIRN QRPKLK

Arabidopsis Description

UVR3(6-4)DNA photolyase [Source:UniProtKB/Swiss-Prot;Acc:O48652]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.