Factsheet for HORVU7Hr1G109800.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G489800.1	Wheat	plastid	94.6	94.6
TraesCS7D01G476200.1	Wheat	plastid	93.93	93.3
TraesCS7B01G392900.2	Wheat	plastid	93.42	92.64
Os06t0661800-01	Rice	plastid	82.97	84.83
EER90163	Sorghum	plastid	81.45	83.71
Zm00001d046935_P001	Maize	plastid	74.03	81.3
GSMUA_Achr1P10510_001	Banana	plastid	64.08	67.98
PGSC0003DMT400076096	Potato	cytosol, plastid	60.37	65.69
VIT_04s0008g02670.t01	Wine grape	plastid	63.91	64.68
AT5G24850.1	Thale cress	plastid	60.54	63.09
KRH61917	Soybean	plastid	62.06	63.01
Solyc08g074270.2.1	Tomato	nucleus	60.88	62.56
Bra036524.1-P	Field mustard	plastid	58.01	62.32
Bra009798.1-P	Field mustard	cytosol	55.82	60.62
CDX88137	Canola	plastid	57.17	59.68
CDX87114	Canola	golgi	51.94	58.78
CDX87110	Canola	cytosol, mitochondrion, peroxisome, plastid	54.97	56.7
CDY19825	Canola	plastid	57.84	56.51
CDX80473	Canola	plastid	59.02	42.89
HORVU7Hr1G080580.2	Barley	plastid	22.77	28.01
HORVU6Hr1G037460.6	Barley	plastid	22.43	23.01
HORVU6Hr1G058740.2	Barley	cytosol	22.43	20.27
HORVU6Hr1G049950.12	Barley	cytosol, mitochondrion	21.92	18.21
HORVU2Hr1G079220.2	Barley	cytosol	20.91	17.42

Protein Annotations

Gene3D:1.10.579.10	Gene3D:1.25.40.80	Gene3D:3.40.50.620	MapMan:35.1	UniProt:A0A287XSS4	InterPro:Cry_DASH
InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf	InterPro:Cryptochr/Photolyase_FAD-bd	InterPro:Cryptochrome/DNA_photolyase_1	InterPro:DNA_photolyase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0003913	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G109800	EnsemblPlants:HORVU7Hr1G109800.2	InterPro:IPR006050
InterPro:IPR014729	PFAM:PF00875	PFAM:PF03441	PRINTS:PR00147	PFscan:PS51645	PANTHER:PTHR11455
PANTHER:PTHR11455:SF22	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48173	SUPFAM:SSF52425	TIGRFAMs:TIGR02765	UniParc:UPI000B46048E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:628954869..628958747

Molecular Weight (calculated)

65961.8 Da

IEP (calculated)

9.929

GRAVY (calculated)

-0.357

Length

593 amino acids

Sequence
(BLAST)

001: KMLHHHLLSS SASAFPPAAQ SLLLLPRPAA SLRALLAMSY AASTSTSSSI SSPFRPPRAV LAAAVPSLGA EETAAAAEEA FRRHTSPGLR RGGGAGGVSV
101: VWFRSDLRVL DNEALARAWA ASGAVLPVYC VDPRVLAGAT HRFGFPKTGA LRAQFLIECL GDLKQNLQKR GLDLLIRHGK PEDILPAIAK AVSAHTVYAH
201: KETCSEELLV ERLVRRGLEK VIIPQGGASN KSLSPKLQLI WGATMYHIDD LPFPVSNLPD VYTQFRKAVE SKSSVRSCGK LPPSLGPAPS SGLDEIGGWG
301: SIPTLESLGL SVTKAEKGMR FVGGESAALG RVHEYFWKND QLKVYKETRN GMLGPDYSTK FSPWLASGSL SPRYVCEEVR RYEKQRVAND STYWVLFELI
401: WRDYFRFLSE KYGNSIFHLG GPRKVASKWS QDQALFESWK DGRTGYPLID ANMKELLATG FMSNRGRQIV CSFLVRDMGI DWRMGAEWFE TCLLDYDPAS
501: NYGNWTYGAG VGNDPREDRY FSIPKQAKTY DPDGEYVAYW LPELRSLAKE RRNFPGASYI KQVVPLKFGG GHQRKDQQFN RQTRPKNIYR RQK

Best Arabidopsis Sequence Match ( AT5G24850.1 )
(BLAST)

001: MAASSLSLSS PLSNPLRRFT LHHLHLSKKP LSSSSLFLCS AAKMNDHIHR VPALTEEEID SVAIKTFERY ALPSSSSVKR KGKGVTILWF RNDLRVLDND
101: ALYKAWSSSD TILPVYCLDP RLFHTTHFFN FPKTGALRGG FLMECLVDLR KNLMKRGLNL LIRSGKPEEI LPSLAKDFGA RTVFAHKETC SEEVDVERLV
201: NQGLKRVGNS TKLELIWGST MYHKDDLPFD VFDLPDVYTQ FRKSVEAKCS IRSSTRIPLS LGPTPSVDDW GDVPTLEKLG VEPQEVTRGM RFVGGESAGV
301: GRVFEYFWKK DLLKVYKETR NGMLGPDYST KFSPWLAFGC ISPRFIYEEV QRYEKERVAN NSTYWVLFEL IWRDYFRFLS IKCGNSLFHL GGPRNVQGKW
401: SQDQKLFESW RDAKTGYPLI DANMKELSTT GFMSNRGRQI VCSFLVRDMG LDWRMGAEWF ETCLLDYDPC SNYGNWTYGA GVGNDPREDR YFSIPKQAQN
501: YDPEGEYVAF WLQQLRRLPK EKRHWPGRLM YMDTVVPLKH GNGPMAGGSK SGGGFRGSHS GRRSRHNGP

Arabidopsis Description

CRYDCryptochrome DASH, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84KJ5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.