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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G334900.2 Wheat plastid 84.02 90.81
TraesCS7A01G344600.1 Wheat plastid 83.82 90.38
TraesCS7B01G238500.1 Wheat cytosol, plastid 79.25 85.08
Os03t0343400-01 Rice cytosol, nucleus, peroxisome, plastid 78.01 81.92
EER94877 Sorghum cytosol, plastid 74.48 80.31
Zm00001d047501_P001 Maize plastid 74.07 80.04
Zm00001d029105_P001 Maize plastid 74.07 80.04
GSMUA_AchrUn_... Banana cytosol 18.67 63.38
GSMUA_Achr5P21430_001 Banana cytosol 52.07 55.04
KRH31864 Soybean cytosol, nucleus, plastid, vacuole 50.0 54.77
GSMUA_AchrUn_... Banana plastid 35.06 52.0
Solyc09g075180.2.1 Tomato cytosol 47.93 51.11
PGSC0003DMT400081378 Potato cytosol 47.51 50.55
VIT_07s0005g00590.t01 Wine grape cytosol 47.51 50.44
KRH69286 Soybean plastid 47.1 48.82
AT2G47590.1 Thale cress cytosol 44.4 47.87
CDY71211 Canola cytosol 43.78 46.78
CDY71236 Canola cytosol 43.57 46.15
Bra004444.1-P Field mustard cytosol 43.36 45.93
CDX80119 Canola endoplasmic reticulum 42.12 37.11
HORVU7Hr1G109800.2 Barley plastid 28.01 22.77
HORVU6Hr1G037460.6 Barley plastid 16.8 14.01
HORVU6Hr1G058740.2 Barley cytosol 13.9 10.21
HORVU6Hr1G049950.12 Barley cytosol, mitochondrion 14.52 9.8
HORVU2Hr1G079220.2 Barley cytosol 13.07 8.85
Protein Annotations
EnsemblPlants:HORVU7Hr1G080580.2EnsemblPlantsGene:HORVU7Hr1G080580Gene3D:1.25.40.80Gene3D:3.40.50.620InterPro:Crypto/Photolyase_FAD-like_sfInterPro:Crypto/Photolyase_N_sf
InterPro:DNA_photolyase_NInterPro:IPR006050InterPro:IPR014729InterPro:Rossmann-like_a/b/a_foldPANTHER:PTHR11455PANTHER:PTHR11455:SF2
PFAM:PF00875PFscan:PS51645SEG:segSUPFAM:SSF48173SUPFAM:SSF52425UniParc:UPI000B480191
UniProt:A0A287X272MapMan:35.1::::
Description
No Description!
Coordinates
chrchr7H:+:478251175..478254836
Molecular Weight (calculated)
48717.7 Da
IEP (calculated)
8.036
GRAVY (calculated)
-0.297
Length
482 amino acids
Sequence
(BLAST)
001: LASPPSSPRA SSEPNPLPHL NYRHPAPPPP RHPSMASASD SDPAAHPRDD PNLPFASFSL SLSLRTPTAH ATLASVPSAV HLPTQISTLA VCLHPSAASS
101: SPRXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXAPGAAGR RRTLVWFRAD LRLHDHEPLH AAVGASSSLL PVFVFDPRDF GKSPSGFDRT GPYRASFLLD
201: SVADLRRSLR ARGGDLVVRV GRPEVVIPEL ARAAGAEAVY AHGEVSRDEC RTEEKVSKAI EKEGVEVKYF WGSTLYHLDD LPFRLNDMPS SYGGFREAVK
301: GLEVRKVLDA PEEVKCVPMK NVLEPGDIPT LGELGLSAPP AMAQDSKSAA GSNLIGGEAE ALERLKKFAA ECCMQPNKAV KDSTQNSIYG ANFSCKISPW
401: LATGCLSPRF MYEELKKHAI RAIPSGSTPK DGDGTSDAGT NWLMFELLWR DFFRFVTKKY SSAQKTSEVA PATGCTPTPA FV
Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)
001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA
Arabidopsis Description
PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.