CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004444.1-P	Field mustard	cytosol	99.34	99.34
CDY71211	Canola	cytosol	96.04	96.9
AT2G47590.1	Thale cress	cytosol	87.69	89.26
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	65.27	67.5
VIT_07s0005g00590.t01	Wine grape	cytosol	66.15	66.3
PGSC0003DMT400081378	Potato	cytosol	64.18	64.46
Solyc09g075180.2.1	Tomato	cytosol	63.96	64.38
KRH69286	Soybean	plastid	62.86	61.51
CDX80119	Canola	endoplasmic reticulum	70.99	59.05
GSMUA_AchrUn_...	Banana	cytosol	18.02	57.75
GSMUA_Achr5P21430_001	Banana	cytosol	51.87	51.75
TraesCS7A01G344600.1	Wheat	plastid	47.69	48.55
TraesCS7D01G334900.2	Wheat	plastid	47.47	48.43
Zm00001d029105_P001	Maize	plastid	47.25	48.21
GSMUA_AchrUn_...	Banana	plastid	34.29	48.0
EER94877	Sorghum	cytosol, plastid	46.81	47.65
Zm00001d047501_P001	Maize	plastid	46.59	47.53
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	47.47	47.06
TraesCS7B01G238500.1	Wheat	cytosol, plastid	45.05	45.66
HORVU7Hr1G080580.2	Barley	plastid	46.15	43.57
CDX88137	Canola	plastid	29.89	23.94
CDX87114	Canola	golgi	25.49	22.14
CDY19825	Canola	plastid	29.01	21.75
CDX87110	Canola	cytosol, mitochondrion, peroxisome, plastid	27.25	21.57
CDX80473	Canola	plastid	30.11	16.79
CDX89827	Canola	cytosol, mitochondrion	15.16	15.9
CDY20139	Canola	cytosol, nucleus, plastid	18.9	15.33
CDY21853	Canola	mitochondrion, plastid	18.9	15.25
CDY18229	Canola	cytosol, mitochondrion	16.04	12.67
CDX86636	Canola	cytosol	16.48	12.12
CDY15503	Canola	cytosol	16.48	12.08
CDY54706	Canola	cytosol	15.6	9.96
CDX75131	Canola	cytosol	15.6	9.96

Protein Annotations

EnsemblPlants:CDY71236	EnsemblPlantsGene:GSBRNA2T00013482001	Gene3D:1.25.40.80	Gene3D:3.40.50.620	InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf
InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2
PFAM:PF00875	PFscan:PS51645	ProteinID:CDY71236	ProteinID:CDY71236.1	SEG:seg	SUPFAM:SSF48173
SUPFAM:SSF52425	UniParc:UPI0004EE7C9B	UniProt:A0A078K086	MapMan:35.1	:	:

Description

BnaAnng36630DBnaAnng36630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K086]

Coordinates

chrLK045035:+:298..2278

Molecular Weight (calculated)

49645.9 Da

IEP (calculated)

7.786

GRAVY (calculated)

-0.293

Length

455 amino acids

Sequence
(BLAST)

001: MESKVVVDGE TKSTEEEEAH AIVTCPCLPI ASLSLSFSPL STTTTQFRFA HLFAHHPNKV KIPTQASYLT HLSLSSLSSP SPPLPSRISF KSTFSANPLH
101: SPLSIVPRRP LDPSSAAALR RSAVVWFRND LRVHDNECLN SANDECLSVL PVYCFDPRDY GKSSSGFDKT GPFRAQFLIE SVSELRKNLE ARGSNLVVRV
201: GKPEAVLVEL AKEIGADAVY AHREVSHDEV KAEGKIESAM KEEGVEVKYF WGSTLYHLDD LPFKVEDLPS NYGAFKDKVQ KLEIRKTIAA LDQLKSLPSR
301: GDVQLGDIPS LLDLGINPSA RTSQEGKPTM VGGETEALTR LKSFAADCQA RLAKGGNQKG GNNSVFGANF SCKISPWLAM GSISPRSMFD ELKKTISAST
401: TPSAPRNGPG DTGLNWLMYE LLWRDFFRFI TKKYSSAKTQ VEEAGPATAC TGALA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.