Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71211 | Canola | cytosol | 89.26 | 88.47 |
| CDY71236 | Canola | cytosol | 89.26 | 87.69 |
| Bra004444.1-P | Field mustard | cytosol | 88.59 | 87.03 |
| VIT_07s0005g00590.t01 | Wine grape | cytosol | 68.68 | 67.62 |
| KRH31864 | Soybean | cytosol, nucleus, plastid, vacuole | 66.44 | 67.5 |
| PGSC0003DMT400081378 | Potato | cytosol | 67.11 | 66.23 |
| Solyc09g075180.2.1 | Tomato | cytosol | 66.44 | 65.71 |
| KRH69286 | Soybean | plastid | 63.31 | 60.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.34 | 57.75 |
| CDX80119 | Canola | endoplasmic reticulum | 68.23 | 55.76 |
| GSMUA_Achr5P21430_001 | Banana | cytosol | 53.24 | 52.19 |
| TraesCS7D01G334900.2 | Wheat | plastid | 49.44 | 49.55 |
| TraesCS7A01G344600.1 | Wheat | plastid | 49.44 | 49.44 |
| Zm00001d029105_P001 | Maize | plastid | 48.55 | 48.65 |
| EER94877 | Sorghum | cytosol, plastid | 48.1 | 48.1 |
| Zm00001d047501_P001 | Maize | plastid | 47.65 | 47.76 |
| Os03t0343400-01 | Rice | cytosol, nucleus, peroxisome, plastid | 48.99 | 47.71 |
| GSMUA_AchrUn_... | Banana | plastid | 34.23 | 47.08 |
| TraesCS7B01G238500.1 | Wheat | cytosol, plastid | 46.76 | 46.55 |
| HORVU7Hr1G080580.2 | Barley | plastid | 47.87 | 44.4 |
| AT5G24850.1 | Thale cress | plastid | 31.1 | 24.43 |
| AT3G15620.1 | Thale cress | mitochondrion | 19.02 | 15.29 |
| AT1G04400.1 | Thale cress | cytosol | 16.11 | 11.76 |
| AT4G08920.1 | Thale cress | cytosol | 14.32 | 9.4 |
Protein Annotations
| Gene3D:1.25.40.80 | Gene3D:3.40.50.620 | MapMan:35.1 | EntrezGene:819372 | ProteinID:AAC62851.1 | ProteinID:AEC10862.1 |
| EMBL:AF053366 | ArrayExpress:AT2G47590 | EnsemblPlantsGene:AT2G47590 | RefSeq:AT2G47590 | TAIR:AT2G47590 | RefSeq:AT2G47590-TAIR-G |
| EnsemblPlants:AT2G47590.1 | TAIR:AT2G47590.1 | EMBL:AY087383 | Unigene:At.10721 | EMBL:BT029173 | InterPro:Crypto/Photolyase_FAD-like_sf |
| InterPro:Crypto/Photolyase_N_sf | InterPro:DNA_photolyase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0006464 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009881 | GO:GO:0009987 |
| GO:GO:0016829 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0038023 | GO:GO:0050896 | InterPro:IPR006050 |
| InterPro:IPR014729 | RefSeq:NP_182281.1 | PFAM:PF00875 | Symbol:PHR2 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51645 | PANTHER:PTHR11455 |
| PANTHER:PTHR11455:SF2 | UniProt:Q058P5 | UniProt:Q8LB72 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF48173 | SUPFAM:SSF52425 |
| UniParc:UPI000004867F | SEG:seg | : | : | : | : |
Description
PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
Coordinates
chr2:+:19521774..19524095
Molecular Weight (calculated)
48881.0 Da
IEP (calculated)
8.128
GRAVY (calculated)
-0.309
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.