CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	80.65	85.23
Solyc09g075180.2.1	Tomato	cytosol	64.3	66.15
PGSC0003DMT400081378	Potato	cytosol	64.09	65.78
VIT_07s0005g00590.t01	Wine grape	cytosol	63.23	64.76
AT2G47590.1	Thale cress	cytosol	60.86	63.31
CDY71236	Canola	cytosol	61.51	62.86
CDY71211	Canola	cytosol	60.65	62.53
Bra004444.1-P	Field mustard	cytosol	61.08	62.42
GSMUA_AchrUn_...	Banana	cytosol	18.28	59.86
GSMUA_Achr5P21430_001	Banana	cytosol	54.84	55.92
Zm00001d029105_P001	Maize	plastid	50.11	52.24
TraesCS7D01G334900.2	Wheat	plastid	50.11	52.24
TraesCS7A01G344600.1	Wheat	plastid	50.11	52.13
EER94877	Sorghum	cytosol, plastid	49.68	51.68
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	50.32	50.98
Zm00001d047501_P001	Maize	plastid	48.82	50.9
GSMUA_AchrUn_...	Banana	plastid	35.48	50.77
TraesCS7B01G238500.1	Wheat	cytosol, plastid	48.39	50.11
HORVU7Hr1G080580.2	Barley	plastid	48.82	47.1
CDX80119	Canola	endoplasmic reticulum	47.74	40.59
KRH61917	Soybean	plastid	29.89	23.8
KRH44412	Soybean	mitochondrion, plastid	16.34	13.5
KRH34384	Soybean	cytosol	17.63	12.77
KRG92422	Soybean	cytosol	16.99	12.46
KRH69122	Soybean	cytosol	14.19	11.0
KRH18908	Soybean	cytosol	14.41	9.84
KRH53063	Soybean	cytosol	14.41	9.82
KRH62344	Soybean	cytosol	14.19	9.69
KRH16735	Soybean	cytosol	14.19	9.69
KRH13218	Soybean	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.25.40.80	EntrezGene:100788050	Gene3D:3.40.50.620	MapMan:35.1	UniProt:A0A0R0KR19	EMBL:ACUP02000699
InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf	InterPro:DNA_photolyase_N	EnsemblPlantsGene:GLYMA_02G017500	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR006050	InterPro:IPR014729	EnsemblPlants:KRH69286	ProteinID:KRH69286	ProteinID:KRH69286.1
PFAM:PF00875	PFscan:PS51645	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48173
SUPFAM:SSF52425	TMHMM:TMhelix	UniParc:UPI0006ED5F4B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:1551414..1554518

Molecular Weight (calculated)

51166.1 Da

IEP (calculated)

7.325

GRAVY (calculated)

-0.205

Length

465 amino acids

Sequence
(BLAST)

001: MEAEKHEAAL AVASVSLSLP RVLPFFQPTT PQPTKLKVPT QASSLTHLSL STPSKTSFKS TISSTPLHAP LSLGPHRPRD PSNAAALRRA AVVWFRNDLR
101: LLDNECLTAA NNESLSVLPV YCFDPADYGK SASGFDKTGP YRAAFLIDSV SDLRRNLQAR GSDLVVRVGK PEAVLVELAK AVGADAVYAH REVSHDEAKA
201: EERVEAAMKE ENVEVKYFWG STLYHVDDLP FQLEDMPSNY GGFRDRVQKL EVRKTIEALD QLKGMPSRGD VEPGEIPSLM DLGLNPSATM SQNGKCVANA
301: SMVGGETEAL QKLKKFAAEC AAQPHKGFKD GTQSIYGANF SCKISPWLAM GCLSPRTMYE ELKKTAGRVI SASSNRNDGG NGSSRTGTNW LMFELLWRDF
401: FSGIAKWSSL VHYGIQILEH ISIEAMYIYI YIYCSCHHDI GFGNPFLPVI FIIVWGFLGK YPMNS

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.